Haplogroup O-M119
The factual accuracy of parts of this article (those related to article) may be compromised due to out-of-date information. (December 2012) |
Haplogroup O-M119 | |
---|---|
Possible time of origin | 33,103 [95% CI 24,460 <-> 40,854] years ago (Karmin 2015[1]) 34,100 or 29,200 years ago (Poznik 2016[2]) 30,100 [95% CI 27,800 <-> 32,400] years before present (YFull 2017[3]) |
Coalescence age | 16,538 [95% CI 11,755 <-> 21,147] years ago (Karmin 2015[1]) 15,000 [95% CI 13,200 <-> 16,900] years before present (YFull 2017[3]) |
Possible place of origin | Southeast Asia or Southern China |
Ancestor | O-M175 > O-F265 |
Defining mutations | M119 |
In human genetics, Haplogroup O-M119 is a Y-chromosome DNA haplogroup. Haplogroup O-M119 is a descendant branch of O-F265, one of two extant primary subclades of Haplogroup O-M175. The same clade previously has been labeled as O-MSY2.2.[4]
Origins
The Haplogroup O-M119 branch is believed to have evolved during the Late Pleistocene (Upper Paleolithic) in Southeast Asia.[citation needed]
Paleolithic migrations
A 2010 study by Karafet suggests haplogroup O-M119 was part of a four-phase colonization model in which Paleolithic migrations of hunter-gatherers shaped the primary structure of current Y-Chromosome diversity of Maritime Southeast Asia. Neolithic incursions made only a minor impact on the paternal gene pool, despite the large cultural impact of the Austronesian expansion. Approximately 5000 BCE, Haplogroup O-M119 coalesced at Sundaland and migrated northwards to as far as Taiwan, where O-M50 constitutes some 90% of the Aboriginal Y-DNA, being the main haplogroup that can be directly linked to the Austronesian expansion in phase 3 (Karafet 2010) .
Taiwan homeland
A study by Li in 2008 concluded that in contrast to the Taiwan homeland hypothesis, Island Southeast Asians do not have a Taiwan origin based on their paternal lineages. According to their results, lineages within Maritime Southeast Asia did not originate from Taiwanese aborigines as linguistic studies suggest. Taiwan aborigines and Indonesians were likely to have been derived from the Tai–Kadai-speaking populations based on their paternal lineages, and thereafter evolved independently of each other (Li 2008) .
The strongest positive correlation between Haplogroup O-M119 and ethno-linguistic affiliation is that which is observed between this haplogroup and the Austronesians. The peak frequency of Haplogroup O-M119 is found among the aborigines of Taiwan, precisely the region from which linguists have hypothesized that the Austronesian language family originated. A slightly weaker correlation is observed between Haplogroup O-M119 and the Han Chinese populations of southern China, as well as between this haplogroup and the Tai–Kadai-speaking populations of southern China and Southeast Asia. The distribution of Tai–Kadai languages in Thailand and other parts of Southeast Asia outside of China has long been believed, for reasons of traditional linguistic geography, to reflect a recent invasion of Southeast Asia by Tai–Kadai-speaking populations originating from southeastern China, and the somewhat elevated frequency of Haplogroup O-M119 among the Tai–Kadai populations, coupled with a high frequency of Haplogroup O-M95, which is a genetic characteristic of the Austroasiatic-speaking peoples of Southeast Asia, suggests that the genetic signature of the Tai–Kadai peoples' affinity with populations of southeastern China has been weakened due to extensive assimilation of the earlier Austroasiatic residents of the lands which the Tai–Kadai peoples invaded. Also, it has been noted that Haplogroup O-M119 lineages among populations of continental Southeast Asia outside of China display a reduced level of diversity when compared with populations of South China and insular Southeast Asia, which may be evidence of a bottleneck associated with the westward migration and settlement of ancestral Tai–Kadai-speaking populations in Indochina.[citation needed]
Distribution
Haplogroup O-M119 lineages are found primarily in Southeast Asian populations of Malaysia, Vietnam, Indonesia, the Philippines, southern China and Taiwan (ISOGG 2010). High frequencies of this haplogroup have been found in populations spread in an arc through southeastern China, Taiwan, the Philippines, and Indonesia. It has been found with generally lower frequency in samples from Oceania, mainland Southeast Asia, Southwest China, Northwest China, North China, Northeast China, Korea, Japan, North Asia, and Central Asia.
Population | Percentage | Count | Source | SNPs |
---|---|---|---|---|
Nias | 100.0% | 60 | Karafet 2010 | M119 |
Nias | 99.8% | 407 | vanOven 2011 | M119 |
Taiwanese aborigines | 89.6% | 48 | Karafet 2010 | M119 |
Mentawai | 86.5% | 74 | Karafet 2010 | M119 |
Aboriginal Taiwanese | 83.4% | 223 | Tajima 2004 | M119 |
Taiwan (aborigines) | 71.8% | 39 | Hurles 2005 | M119(xM101) |
Taiwan (aborigines) | 68.9% | 74 | Underhill 2000 | M119(xM101) |
Hlai/Cun | 58% | - | Li 2008 | - |
Tagalog (Philippine subgroup) |
46.0% | 50 | Tajima 2004 | M119 |
Philippines | 35.7% | 28 | Hurles 2005 | M119(xM101) |
Kota Kinabalu | 29.2% | 65 | Hurles 2005 | M119 |
Trobriand Islands | 28% | - | Kayser 2003 | - |
Li (Hlai) | 26.5% | 34 | Xue 2006 | M119 |
Malay (near Kuala Lumpur) | 25.0% | 12 | Tajima 2004 | M119 |
Han (East China) | 24.0% | 167 | Yan 2011 | M119 |
Han Chinese | 23% | - | Kayser 2003 | - |
Java | 23% | - | Kayser 2003 | - |
Nusa Tenggara | 23% | - | Kayser 2003 | - |
Banjarmasin | 22.7% | 22 | Hurles 2005 | M119(xM101) |
Balinese | 21.1% | 641 | Karafet 2010 | M119 |
Mandar | 20.4% | 54 | Karafet 2010 | M119(xP203) |
Tujia | 20% | - | Su 1999 | - |
Han (Meixian) | 20.0% | 35 | Xue 2006 | M119 |
Buka | 20.0% | 10 | Scheinfeldt 2006 | M119 |
Thin Board Mien | 18.2% | 11 | Cai 2011 | M119(xM110) |
Majuro (Marshall Islands) | 18.2% | 11 | Hurles 2005 | M50 |
Admiralty Islands | 18% | - | Kayser 2008 | - |
Balinese | 18% | - | Karafet 2005 | - |
Sui | 18% | - | Xie 2004 | - |
Zhuang | 18% | - | Su 1999 | - |
Malagasy | 17.1% | 35 | Hurles 2005 | M50 |
Han (South China) | 16.9% | 65 | Yan 2011 | M119 |
Qiang | 15.2% | 33 | Xue 2006 | M119 |
Borneo | 15% | - | Kayser 2003 | - |
Han Chinese | 15% | - | Tajima 2004 | - |
Java | 14.8% | 61 | Karafet 2010 | M119 |
She | 14.7% | 34 | Xue 2006 | M119 |
Han (Chengdu) | 14.7% | 34 | Xue 2006 | M119 |
Manus | 14.3% | 7 | Scheinfeldt 2006 | M119 |
Palyu | 13.3% | 30 | Cai 2011 | M119 |
Batak Toba | 13.2% | 38 | Karafet 2010 | M119(xM110) |
Sumba | 12.6% | 350 | Karafet 2010 | M119 |
Micronesia | 12.5% | 16 | Karafet 2010 | M119(xP203, M110) |
Guizhou Miao | 12.2% | 49 | Cai 2011 | M119(xM110) |
Lowland Kimmun | 12.2% | 41 | Cai 2011 | M119(xM110) |
Thai (Northern Thailand) | 11.8% | 17 | He 2012 | P203(xM101) |
Bunu | 11.1% | 36 | Cai 2011 | M119(xM110) |
Filipinos | 10.4% | 48 | Karafet 2010 | M119 |
Zhuang | 10% | - | Hammer 2006 | - |
Mountain Straggler Mien | 10.0% | 20 | Cai 2011 | M119(xM110) |
Han (China & Taiwan) | 9.7% | 165 | Karafet 2010 | M119(xM110) |
Flores | 9.6% | 394 | Karafet 2010 | M119(xM110) |
Zhuang | 9.6% | 166 | Chen 2006 | - |
Han (Taiwan) | 9.5% | 21 | Tajima 2004 | M119 |
Han (Yili) | 9.4% | 32 | Xue 2006 | M119 |
Borneo (Indonesia) | 9.3% | 86 | Karafet 2010 | M119 |
Bougainville | 9.2% | 65 | Scheinfeldt 2006 | M119 |
Top Board Mien | 9.1% | 11 | Cai 2011 | M119(xM110) |
Northern Mien | 9.1% | 33 | Cai 2011 | M119(xM110) |
Northern She | 8.9% | 56 | Cai 2011 | M119(xM110) |
Thai (Chiang Mai & Khon Kaen) |
8.8% | 34 | Tajima 2004 | M119 |
Hui | 8.6% | 35 | Xue 2006 | M119 |
Mosuo (Ninglang, Yunnan) | 8.5% | 47 | Wen 2004 | M119(xM110) |
Tonga | 8.3% | 12 | Karafet 2010 | M119(xP203, M110) |
Tujia (Jishou, Hunan) | 8.2% | 49 | Karafet 2010 | P203 |
Hlai/Cun | 8% | - | Li 2008 | - |
Ewenki (China) | 7.7% | 26 | Xue 2006 | M119 |
Xibe | 7.3% | 41 | Xue 2006 | M119 |
Hunan Miao | 7.0% | 100 | Cai 2011 | M119(xM110) |
Tujia | 7% | - | Xie 2004 | - |
Miao (China) | 6.9% | 58 | Karafet 2010 | P203 |
Katu | 6.7% | 45 | Cai 2011 | M119(xM110) |
Moluccas | 6.7% | 30 | Karafet 2010 | M119 |
Han (Lanzhou) | 6.7% | 30 | Xue 2006 | M119 |
Kinh | 6.7% | 15 | Cai 2011 | M119(xM110) |
Kinh (Hanoi, Vietnam) | 6.6% | 76 | He 2012 | P203(xM101) |
Southern Mien | 6.5% | 31 | Cai 2011 | M119(xM110) |
Malaysia | 6.3% | 32 | Karafet 2010 | M119(xM110) |
Yunnan Miao | 6.1% | 49 | Cai 2011 | M119(xM110) |
Northern Han | 6.1% | 49 | Tajima 2004 | M119 |
Comorians | 6.0% | 381 | Msaidie 2010 | M50=22 MSY2.2(xM50)=1 |
Bai (Dali, Yunnan) | 6.0% | 50 | Wen 2004 | M119(xM110) |
Kyrgyz (Kyrgyzstan) | 5.8% | 52 | Wells 2001 | M119 |
Vietnam | 5.7% | 70 | Karafet 2010 | P203 |
Yao (Liannan, Guangdong) | 5.7% | 35 | Xue 2006 | M119 |
Samoa | 5.6% | 18 | Karafet 2010 | P203 |
Daur | 5.1% | 39 | Xue 2006 | M119 |
Cham (Binh Thuan, Vietnam) |
5.1% | 59 | He 2012 | M119(xM50) |
Dungan (Kyrgyzstan) | 5.0% | 40 | Wells 2001 | M119 |
Han (NE China) | 4.8% | 42 | Katoh 2005 | M119 |
Maewo (Vanuatu) | 4.5% | 44 | Karafet 2010 | M119(xP203) |
Korean | 4.4% | 45 | Wells 2001 | M119 |
Western Mien | 4.3% | 47 | Cai 2011 | M119(xM110) |
Pumi (Ninglang, Yunnan) | 4.3% | 47 | Wen 2004 | M119(xM110) |
Mongolian | 4.2% | 24 | Wells 2001 | M119 |
Western Samoa | 4.0% | 25 | Hurles 2005 | M119(xM101, M50) |
Manchu | 3.8% | 52 | Hammer 2006 | M119 |
Koreans (Daejeon) | 3.8% | 133 | Park 2012 | P203=3 M119(xP203, M110)=2 |
New Ireland | 3.7% | 109 | Scheinfeldt 2006 | M119 |
Bo | 3.6% | 28 | Cai 2011 | M119(xM110) |
Japanese | 3.4% | 263 | Nonaka 2007 | M119(xM101, M50) |
Lembata | 3.3% | 92 | Karafet 2010 | M119(xM110) |
Korean | 3.2% | 216 | Kim 2007 | M119 |
Han (North China) | 3.1% | 129 | Yan 2011 | M119(xM110) |
Papua New Guinea (Highlands) |
3.0% | 33 | Karafet 2010 | P203 |
Manchu (NE China) | 3.0% | 101 | Katoh 2005 | M119 |
Koreans (Seoul) | 3.0% | 573 | Park 2012 | P203=16 M119(xP203, M110)=1 |
Manchu | 2.9% | 35 | Xue 2006 | M119 |
Han (Harbin) | 2.9% | 35 | Xue 2006 | M119 |
Buyi | 2.9% | 35 | Xue 2006 | M119 |
Yao (Bama, Guangxi) | 2.9% | 35 | Xue 2006 | M119 |
West New Britain | 2.8% | 249 | Scheinfeldt 2006 | M119 |
Koreans | 2.7% | 300 | Park 2013 | M119 |
Koreans | 2.7% | 75 | Hammer 2006 | M119 |
Japanese (Kantō) | 2.6% | 117 | Katoh 2005 | M119 |
Koreans (Seoul) | 2.4% | 85 | Katoh 2005 | M119 |
Lavongai | 2.3% | 43 | Scheinfeldt 2006 | M119 |
Koreans (South Korea) | 2.2% | 506 | Kim 2011 | M119 |
Laven | 2.0% | 50 | Cai 2011 | M119(xM110) |
Yi (Shuangbai, Yunnan) | 2.0% | 50 | Wen 2004 | M119(xM110) |
Hmong Daw (Laos) | 2.0% | 51 | Cai 2011 | M119(xM110) |
She | 2.0% | 51 | Karafet 2010 | P203 |
Japanese (Kyushu) | 1.9% | 104 | Tajima 2004 | M119 |
Vanuatu | 1.9% | 52 | Hurles 2005 | M50 |
Yao (Guangxi) | 1.7% | 60 | Karafet 2010 | P203 |
Uygur | 1.4% | 70 | Xue 2006 | M119 |
East New Britain | 1.4% | 145 | Scheinfeldt 2006 | M119 |
Japanese | 1.2% | 2390 | Sato 2014 | M119 |
Mongolia (mostly Khalkh) |
0.7% | 149 | Hammer 2006 | M119 |
Mongols (Mongolia) | 0.6% | 160 | DiCristofaro 2013 | M119 |
A 2008 study by Li suggested that the admixture analyses of Tai–Kadai-speaking populations showed a significant genetic influence in a large proportion of Indonesians. Most of the population samples contained a high frequency of haplogroup O-M119 (Hui 2008) .
The frequencies of Haplogroup O-M119 among various East Asian and Austronesian populations suggest a complex genetic history of the modern Han populations of southern China.[citation needed] Although Haplogroup O-M119 occurs only at an average frequency of approximately 4% among Han populations of northern China and peoples of southwestern China and Southeast Asia who speak Tibeto-Burman languages, the frequency of this haplogroup among the Han populations of southern China nearly quadruples to about 15-23%.[5] The frequency of Haplogroup O-M119 among the Southern Han has been found to be slightly greater than the arithmetic mean of the frequencies of Haplogroup O-M119 among the Northern Han and a pooled sample of Austronesian populations. This suggests that modern Southern Han populations may possess a non-trivial number of male ancestors who were originally affiliated with some Austronesian-related culture, or who at least shared some genetic affinity with many of the ancestors of modern Austronesian peoples.[6][7]
Subclade distribution
O-M119
This lineage is found frequently in Austronesians, southern Han Chinese, and Tai peoples.[8] This lineage is presumed to be a marker of the prehistoric Austronesian expansion, with possible origins encompassing the regions along the southeastern coast of China and neighboring Taiwan, and is found among modern populations of Maritime Southeast Asia and Oceania (Karafet 2005) .
Haplogroup O-M119 Y-chromosomes also have been found to occur at low frequency among various populations of Siberia, such as the Nivkhs (one of 17 sampled Y-chromosomes), Ulchi/Nanai (2/53), Yenisey Evenks (1/31), and especially the Buryats living in the Sayan-Baikal uplands of Irkutsk Oblast (6/13) (Lell 2002) .
O-P203
O-P203 was found in 86.7% (52/60) of a sample from Nias, 70.8% (34/48) of Taiwanese Aboriginals, 28.4% (21/74) of Mentawai, 11.4% (73/641) of Balinese, 9.8% (6/61) of a sample from Java, 9.1% (36/394) of a sample from Flores, 9.1% (15/165) of Han Chinese, 8.3% (1/12) of a sample from Western Samoa, 8.2% (4/49) of Tujia from Hunan, 6.9% (4/58) of Miao from China, 5.7% (4/70) of Vietnamese, 3.3% (1/30) of a sample from the Moluccas, 3.1% (1/32) of Malaysians, 3.0% (1/33) of a sample from highland Papua New Guinea, 2.6% (1/38) of a sample from Sumatra, 2.3% (2/86) of a sample from Borneo, 2.1% (1/48) of Filipinos, 2.0% (1/51) of She, 1.7% (1/60) of Yao from Guangxi, 1.1% (1/92) of a sample from Lembata, and 0.9% (3/350) of a sample from Sumba.[9]
In a study published in 2011, O-P203 was observed in 22.2% (37/167) of Han Chinese male volunteers at Fudan University in Shanghai whose origin may be traced back to East China (Jiangsu, Zhejiang, Shanghai, or Anhui), 12.3% (8/65) of Han Chinese male volunteers whose origin may be traced back to South China, and 1.6% (2/129) of Han Chinese male volunteers whose origin may be traced back to North China.[10]
O-M101
This lineage was observed in one individual from China (Underhill 2000) and another from Kota Kinabalu (Hurles 2005) .
O-M50
This lineage occurs among Austronesian peoples of Taiwan, the Philippines, Indonesia, Melanesia, Micronesia, and Madagascar as well as among some populations of continental Southeast Asia and among Bantu peoples of the Comoros.[11][citation needed] It also has been found in a Hawaiian.[12]
A study published in 2010 found O-M110 in 18.8% (9/48) Taiwanese Aboriginals, 13.3% (8/60) Nias, 8.3% (4/48) Philippines, 7.4% (4/54) Sulawesi, 6.3% (22/350) Sumba, 5.8% (5/86) Borneo, 3.3% (1/30) Moluccas, 2.3% (1/44) Maewo, Vanuatu, 1.6% (1/61) Java, 1.4% (1/74) Mentawai, and 0.8% (5/641) Bali.[13]
A study published in 2012 found O-M110 in 4.6% (33/712) of males from the Solomon Islands.[14]
Phylogenetics
Phylogenetic history
Prior to 2002, there were in academic literature at least seven naming systems for the Y-Chromosome Phylogenetic tree. This led to considerable confusion. In 2002, the major research groups came together and formed the Y-Chromosome Consortium (YCC). They published a joint paper that created a single new tree that all agreed to use. Later, a group of citizen scientists with an interest in population genetics and genetic genealogy formed a working group to create an amateur tree aiming at being above all timely. The table below brings together all of these works at the point of the landmark 2002 YCC Tree. This allows a researcher reviewing older published literature to quickly move between nomenclatures.
YCC 2002/2008 (Shorthand) | (α) | (β) | (γ) | (δ) | (ε) | (ζ) | (η) | YCC 2002 (Longhand) | YCC 2005 (Longhand) | YCC 2008 (Longhand) | YCC 2010r (Longhand) | ISOGG 2006 | ISOGG 2007 | ISOGG 2008 | ISOGG 2009 | ISOGG 2010 | ISOGG 2011 | ISOGG 2012 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
O-M175 | 26 | VII | 1U | 28 | Eu16 | H9 | I | O* | O | O | O | O | O | O | O | O | O | O |
O-M119 | 26 | VII | 1U | 32 | Eu16 | H9 | H | O1* | O1a | O1a | O1a | O1a | O1a | O1a | O1a | O1a | O1a | O1a |
O-M101 | 26 | VII | 1U | 32 | Eu16 | H9 | H | O1a | O1a1 | O1a1a | O1a1a | O1a1 | O1a1 | O1a1a | O1a1a | O1a1a | O1a1a | O1a1a |
O-M50 | 26 | VII | 1U | 32 | Eu16 | H10 | H | O1b | O1a2 | O1a2 | O1a2 | O1a2 | O1a2 | O1a2 | O1a2 | O1a2 | O1a2 | O1a2 |
O-P31 | 26 | VII | 1U | 33 | Eu16 | H5 | I | O2* | O2 | O2 | O2 | O2 | O2 | O2 | O2 | O2 | O2 | O2 |
O-M95 | 26 | VII | 1U | 34 | Eu16 | H11 | G | O2a* | O2a | O2a | O2a | O2a | O2a | O2a | O2a | O2a | O2a1 | O2a1 |
O-M88 | 26 | VII | 1U | 34 | Eu16 | H12 | G | O2a1 | O2a1 | O2a1 | O2a1 | O2a1 | O2a1 | O2a1 | O2a1 | O2a1 | O2a1a | O2a1a |
O-SRY465 | 20 | VII | 1U | 35 | Eu16 | H5 | I | O2b* | O2b | O2b | O2b | O2b | O2b | O2b | O2b | O2b | O2b | O2b |
O-47z | 5 | VII | 1U | 26 | Eu16 | H5 | I | O2b1 | O2b1a | O2b1 | O2b1 | O2b1a | O2b1a | O2b1 | O2b1 | O2b1 | O2b1 | O2b1 |
O-M122 | 26 | VII | 1U | 29 | Eu16 | H6 | L | O3* | O3 | O3 | O3 | O3 | O3 | O3 | O3 | O3 | O3 | O3 |
O-M121 | 26 | VII | 1U | 29 | Eu16 | H6 | L | O3a | O3a | O3a1 | O3a1 | O3a1 | O3a1 | O3a1 | O3a1 | O3a1 | O3a1a | O3a1a |
O-M164 | 26 | VII | 1U | 29 | Eu16 | H6 | L | O3b | O3b | O3a2 | O3a2 | O3a2 | O3a2 | O3a2 | O3a2 | O3a2 | O3a1b | O3a1b |
O-M159 | 13 | VII | 1U | 31 | Eu16 | H6 | L | O3c | O3c | O3a3a | O3a3a | O3a3 | O3a3 | O3a3a | O3a3a | O3a3a | O3a3a | O3a3a |
O-M7 | 26 | VII | 1U | 29 | Eu16 | H7 | L | O3d* | O3c | O3a3b | O3a3b | O3a4 | O3a4 | O3a3b | O3a3b | O3a3b | O3a2b | O3a2b |
O-M113 | 26 | VII | 1U | 29 | Eu16 | H7 | L | O3d1 | O3c1 | O3a3b1 | O3a3b1 | - | O3a4a | O3a3b1 | O3a3b1 | O3a3b1 | O3a2b1 | O3a2b1 |
O-M134 | 26 | VII | 1U | 30 | Eu16 | H8 | L | O3e* | O3d | O3a3c | O3a3c | O3a5 | O3a5 | O3a3c | O3a3c | O3a3c | O3a2c1 | O3a2c1 |
O-M117 | 26 | VII | 1U | 30 | Eu16 | H8 | L | O3e1* | O3d1 | O3a3c1 | O3a3c1 | O3a5a | O3a5a | O3a3c1 | O3a3c1 | O3a3c1 | O3a2c1a | O3a2c1a |
O-M162 | 26 | VII | 1U | 30 | Eu16 | H8 | L | O3e1a | O3d1a | O3a3c1a | O3a3c1a | O3a5a1 | O3a5a1 | O3a3c1a | O3a3c1a | O3a3c1a | O3a2c1a1 | O3a2c1a1 |
Research publications
The following research teams per their publications were represented in the creation of the YCC tree.
Phylogenetic trees
This phylogenetic tree of haplogroup O subclades is based on the YCC 2008 tree (Karafet 2008) and subsequent published research.
- O-MSY2.2 (MSY2.2)
- O-M119 (M119)
- O-P203.2 (M307.2/P203.2)
- O-M50 (M50, M103, M110)
- O-M119 (M119)
See also
Genetics
Y-DNA O subclades
Y-DNA backbone tree
References
Footnotes
Works cited
Journals
- Chen, Chen; Hui, LI; Zhen-Dong, QIN; Wen-Hong, LIU; Wei-Xiong, LIN; Rui-Xing, YIN; Li, JIN; Shang-Ling, PAN (2006). "Y-chromosome Genotyping and Genetic Structure of Zhuang Populations". Acta Genetica Sinica. 33 (12): 1060–72. doi:10.1016/S0379-4172(06)60143-1. PMID 17185165.
- Hammer, Michael F.; Karafet, Tatiana M.; Park, Hwayong; Omoto, Keiichi; Harihara, Shinji; Stoneking, Mark; Horai, Satoshi (2005). "Dual origins of the Japanese: Common ground for hunter-gatherer and farmer Y chromosomes". Journal of Human Genetics. 51 (1): 47–58. doi:10.1007/s10038-005-0322-0. PMID 16328082.
- Hurles, M; Sykes, B; Jobling, M; Forster, P (2005). "The Dual Origin of the Malagasy in Island Southeast Asia and East Africa: Evidence from Maternal and Paternal Lineages". The American Journal of Human Genetics. 76 (5): 894–901. doi:10.1086/430051. PMC 1199379. PMID 15793703.
- Karafet, Tatiana M.; Lansing, J. S.; Redd, Alan J.; Watkins, Joseph C.; Surata, S. P. K.; Arthawiguna, W. A.; Mayer, Laura; Bamshad, Michael; et al. (2005). "Balinese Y-Chromosome Perspective on the Peopling of Indonesia: Genetic Contributions from Pre-Neolithic Hunter-Gatherers, Austronesian Farmers, and Indian Traders". Human Biology. 77 (1): 93–114. doi:10.1353/hub.2005.0030. PMID 16114819.
- Karafet, T. M.; Hallmark, B.; Cox, M. P.; Sudoyo, H.; Downey, S.; Lansing, J. S.; Hammer, M. F. (2010). "Major East-West Division Underlies Y Chromosome Stratification across Indonesia". Molecular Biology and Evolution. 27 (8): 1833–44. doi:10.1093/molbev/msq063. PMID 20207712.
- Kayser, Manfred; Brauer, Silke; Weiss, Gunter; Schiefenhövel, Wulf; Underhill, Peter; Shen, Peidong; Oefner, Peter; Tommaseo-Ponzetta, Mila; Stoneking, Mark (2003). "Reduced Y-Chromosome, but Not Mitochondrial DNA, Diversity in Human Populations from West New Guinea". The American Journal of Human Genetics. 72 (2): 281–302. doi:10.1086/346065. PMC 379223. PMID 12532283.
- Kayser, M.; Choi, Y.; Van Oven, M.; Mona, S.; Brauer, S.; Trent, R. J.; Suarkia, D.; Schiefenhovel, W.; Stoneking, M. (2008). "The Impact of the Austronesian Expansion: Evidence from mtDNA and Y Chromosome Diversity in the Admiralty Islands of Melanesia". Molecular Biology and Evolution. 25 (7): 1362–74. doi:10.1093/molbev/msn078. PMID 18390477.
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- Li, Hui; Wen, Bo; Chen, Shu-Juo; Su, Bing; Pramoonjago, Patcharin; Liu, Yangfan; Pan, Shangling; Qin, Zhendong; Liu, Wenhong; Cheng, Xu; Yang, Ningning; Li, Xin; Tran, Dinhbinh; Lu, Daru; Hsu, Mu-Tsu; Deka, Ranjan; Marzuki, Sangkot; Tan, Chia-Chen; Jin, Li (2008). "Paternal genetic affinity between western Austronesians and Daic populations". BMC Evolutionary Biology. 8: 146. doi:10.1186/1471-2148-8-146. PMC 2408594. PMID 18482451.
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: CS1 maint: unflagged free DOI (link) - MacAulay, Dongna; Li, Hui; Ou, Caiying; Lu, Yan; Sun, Yuantian; Yang, Bo; Qin, Zhendong; Zhou, Zhenjian; et al. (2008). MacAulay, Vincent (ed.). "Paternal Genetic Structure of Hainan Aborigines Isolated at the Entrance to East Asia". PLoS ONE. 3 (5): e2168. doi:10.1371/journal.pone.0002168. PMC 2374892. PMID 18478090.
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: CS1 maint: unflagged free DOI (link) - Su, Bing; Xiao, Junhua; Underhill, Peter; Deka, Ranjan; Zhang, Weiling; Akey, Joshua; Huang, Wei; Shen, Di; et al. (1999). "Y-Chromosome Evidence for a Northward Migration of Modern Humans into Eastern Asia during the Last Ice Age". The American Journal of Human Genetics. 65 (6): 1718–24. doi:10.1086/302680. PMC 1288383. PMID 10577926.
- Tajima, Atsushi; Hayami, Masanori; Tokunaga, Katsushi; Juji, Takeo; Matsuo, Masafumi; Marzuki, Sangkot; Omoto, Keiichi; Horai, Satoshi (2004). "Genetic origins of the Ainu inferred from combined DNA analyses of maternal and paternal lineages". Journal of Human Genetics. 49 (4): 187–93. doi:10.1007/s10038-004-0131-x. PMID 14997363.
- Underhill, Peter A.; Shen, Peidong; Lin, Alice A.; Jin, Li; Passarino, Giuseppe; Yang, Wei H.; Kauffman, Erin; Bonné-Tamir, Batsheva; et al. (2000). "Y chromosome sequence variation and the history of human populations". Nature Genetics. 26 (3): 358–61. doi:10.1038/81685. PMID 11062480.
- Xie, XH; Li, H; Mao, XY; Wen, B; Gao, S; Jin, JZ; Lu, DR; Jin, L (2004). "Genetic structure of Tujia as revealed by Y chromosomes". Acta Genetica Sinica. 31 (10): 1023–1029. PMID 15552034.
Websites
- ISOGG (2010). "Y-DNA Haplogroup O and its Subclades. 2010". International Society of Genetic Genealogy. Retrieved 2010.
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Further reading
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References
- ^ a b Monika Karmin, Lauri Saag, Mário Vicente, et al., "A recent bottleneck of Y chromosome diversity coincides with a global change in culture." Genome Research (2015) 25: 459-466. doi: 10.1101/gr.186684.114
- ^ G. David Poznik, Yali Xue, Fernando L. Mendez, et al., "Punctuated bursts in human male demography inferred from 1,244 worldwide Y-chromosome sequences." Nature Genetics 2016 June ; 48(6): 593–599. doi:10.1038/ng.3559.
- ^ a b YFull Haplogroup YTree v5.04 at 16 May 2017
- ^ https://isogg.org/tree/ISOGG_HapgrpO.html: "MSY2.2 was removed from tree because not providing reliable results."
- ^ Yan, Shi (September 2011). "An updated tree of Y-chromosome Haplogroup O and revised phylogenetic positions of mutations P164 and PK4". European Journal Of Genetics. 19: 1013–5. doi:10.1038/ejhg.2011.64. PMC 3179364. PMID 21505448.
- ^ HUGO Pan-Asian SNP Consortium, HUGO Pan-Asian SNP Consortium. "Mapping Human Genetic Diversity in Asia". www.sciencemag.org. Science Magazine. Retrieved 11 December 2009.
- ^ HUGO Pan-Asian SNP Consortium, HUGO Pan-Asian SNP Consortium. "Mapping Human Genetic Diversity in Asia". www.sciencemag.org. Science Magazine. Retrieved 11 December 2009.
- ^ "Major East–West Division Underlies Y Chromosome Stratification across Indonesia". Karafet et al. Retrieved 2010.
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(help) - ^ Karafet, Tatiana. "Major East–West Division Underlies Y Chromosome Stratification across Indonesia". http://mbe.oxfordjournals.org/. Oxford Journals. Retrieved 5 March 2010.
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- ^ Shi Yan, Chuan-Chao Wang, Hui Li, Shi-Lin Li, Li Jin, and The Genographic Consortium, "An updated tree of Y-chromosome Haplogroup O and revised phylogenetic positions of mutations P164 and PK4." European Journal of Human Genetics (2011) 19, 1013–1015; doi:10.1038/ejhg.2011.64; published online 20 April 2011.
- ^ Said Msaidie, Axel Ducourneau, Gilles Boetsch, et al., "Genetic diversity on the Comoros Islands shows early seafaring as major determinant of human biocultural evolution in the Western Indian Ocean." European Journal of Human Genetics (2010), 1–6. doi:10.1038/ejhg.2010.128
- ^ Swapan Mallick, Heng Li, Mark Lipson, et al., "The Simons Genome Diversity Project: 300 genomes from 142 diverse populations." Nature 538, 201–206 (13 October 2016) doi:10.1038/nature18964
- ^ Karafet, T. M.; Hallmark, B.; Cox, M. P.; Sudoyo, H.; Downey, S.; Lansing, J. S.; Hammer, M. F. (2010). "Major East-West Division Underlies Y Chromosome Stratification across Indonesia". Molecular Biology and Evolution. 27 (8): 1833–44. doi:10.1093/molbev/msq063. PMID 20207712.
- ^ Frederick Delfin, Sean Myles, Ying Choi, David Hughes, Robert Illek, Mannis van Oven, Brigitte Pakendorf, Manfred Kayser, and Mark Stoneking, "Bridging Near and Remote Oceania: mtDNA and NRY Variation in the Solomon Islands." Molecular Biology and Evolution 29(2):545–564. 2012 doi:10.1093/molbev/msr186.