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User:Xcsantos/sandbox

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Cell types Markers
Neural Stem Cell

ABCG2; NeuroD1; ASCL1/Mash1; Noggin beta-Catenin; Notch-1; Notch-2; Brg1  ; Nrf2  ; N-Cadherin; Nucleostemin; Calcitonin R; Numb; CD15/Lewis X; Otx2; CDCP1; Pax3; COUP-TF I/NR2F1; Pax6; CXCR4; PDGF R alpha; FABP7/B-FABP; PKC zeta; FABP8/M-FABP; Prominin 2; FGF R2; ROR2; FGF R4; RUNX1/CBFA2; FoxD3; RXR alpha/NR2B1; Frizzled-9; sFRP-2; GATA-2; SLAIN1; GCNF/NR6A1; SOX1; GFAP; SOX2; Glut1; SOX9; HOXB1; SOX11; ID2; SOX21; Meteorin; SSEA-1; MSX1; TRAF-4; Musashi-1; Vimentin; Musashi-2; ZIC1; Nestin

Neural Progenitor Markers

A2B5; AP-2 Alpha; ATPase Na+/K+ transporting alpha 1; Activin RIIA; Brg1; CD168/RHAMM; CD4; Doublecortin/DCX; Frizzled 4/CD344; GAP43; Jagged1; Laminin; MSX1/HOX7; Mash1; Musashi-1; Nestin; Netrin-1; Netrin-4; Neuritin; NeuroD1; Neurofilament alpha-internexin/NF66; Notch1; Notch2; Notch3; Nucleostemin; Otx2; PAX3; S100B; SOX2; Semaphorin 3C; Semaphorin 6A; Semaphorin 6B; Semaphorin 7A; TROY/TNFRSF19; Tubulin βII; Tuj 1; Vimentin

Early Neuronal Markers

ATH1/MATH1; ASH1/MASH1; Hes5; HuC/Hu; HuD; Internexin α; L1 neural adhesion molecule; MAP1B/MAP5; MAP2A; MAP2B; Nerve Growth Factor Rec/NGFR); Nestin; NeuroD; Neurofilament L 68 kDa; Neuron Specific Enolase/NSE; NeuN; Nkx-2.2/NK-2; Noggin; Pax-6; PSA-NCAM; Tbr1; Tbr2; Tubulin βIII; TUC-4; Tyrosine Hydroxylase/TH

Immature Neuron & Growth Cone Markers

Collapsin Response Mediated Protein 1 /CRMP1; Collapsin Response Mediated Protein 2 /CRMP2; Collapsin Response Mediated Protein 5 /CRMP5; Contactin-1; Cysteine-rich motor neuron 1/CRIM1; c-Ret phosphor Serine 696; Doublecortin/DCX; Ephrin A2; Ephrin A4; Ephrin A5; Ephrin B1; Ephrin B2; GAP-43; HuC; HuD; Internexin alpha; Laminin-1; LINGO-1; MAP1B/MAP5; Mical-3; NAP-22; NGFR; Nestin; Netrin-1; Neuropilin; Plexin-A1; RanBPM; Semaphorin 3A; Semaphorin 3F; Semaphorin 4D; Slit2; Slit3; Staufen; Tbr 1; Tbr 2; Trk A; Tubulin βIII; TUC-4

Differentiated Post-Mitotic Neuronal Cells

NeuN; NF-L; NF-M; GAD; TH; PSD-95; Synaptophysin; VAMP; ZENON

Motoneurons

ChAT/choline acetyltransferase Chox10; En1; Even-skipped/Eve; Evx1; Evx2; Fibroblast growth factor-1/FGF1; HB9; Isl1; Isl2; Lim3; Nkx6; p75 neurotrophin receptor; REG2; Sim1; SMI32; Zfh1

Perisynaptic

4.1G; Acetylcholinesterase; Ack1; AMPA Receptor Binding Protein/ABP; ARG3.1; Arp2; E-Cadherin; N-Cadherin; Calcyon; Catenin alpha and beta; Caveolin; CHAPSYN-110/PSD93; Chromogranin A; Clathrin light chain; Cofilin; Complexin 1/CPLX1/Synaphin 2; Contactin-1; CRIPT; Cysteine String Protein/CSP; Dynamin 1; Dymanin 2; Flotillin-1; Fodrin; GRASP; GRIP1; Homer; Mint-1; Munc-18; NSF; PICK1; PSD-95; RAB4; Rabphillin 3A; SAD A; SAD B; SAP-102; SHANK1a; SNAP-25; Snapin; Spinophilin/Neurabin-1; Stargazin; Striatin; SYG-1; Synaptic Vesicle Protein 2A; Synaptic Vesicle Protein 2B; Synapsin 1; Synaptobrevin/VAMP; Synaptojanin 1; Synaptophysin; Synaptotagmin; synGAP; Synphilin-1; Syntaxin 1; Syntaxin 2; Syntaxin 3; Syntaxin 4; Synuclein alpha; VAMP-2; Vesicular Acetylcholine Transporter/VAChT; Vesicular GABA transporter/VGAT/VIAAT; Vesicular Glutamate Transporter 1, 2, 3/VGLUT; Vesicular Monoamine Transporter 1, 2

Cholinergic

Acetylcholine/ACh; Acetylcholinesterase; Choline Acetyltransferase/ChAT; Choline transporter; Vesicular Acetylcholine Transporter/VAChT

Dopaminergic

Adrenaline; Dopamine; Dopamine Beta Hydroxylase/DBH; Dopamine Transporter/DAT; L-DOPA; Nitric Oxide-Dopamine; Norepinephrine; Norepinephrine Transporter/NET; Parkin; Tyrosine Hydroxylase/TH; TorsinA

Serotonergic

DL-5-Hydroxytryptophan; Serotonin; Serotonin Transporter/SERT; Tryptophan Hydroxylase

GABAergic

DARPP-32; GABA; GABA Transporters 1; GABA Transporters 2; GABA Transporters 3; Glutamate Decarboxylase/GAD; Vesicular GABA transporter/VGAT/VIAAT

Glutamatergic

Glutamate; Glutamate Transporter; Glutamine; Glutamine Synthetase; Vesicular Glutamate Transporter 1; Vesicular Glutamate Transporter 2; Vesicular Glutamate Transporter 3