FRAS1

FRAS1
Identifiers
Aliases	FRAS1, Fraser extracellular matrix complex subunit 1, FRASRS1
External IDs	OMIM: 607830; MGI: 2385368; HomoloGene: 23516; GeneCards: FRAS1; OMA:FRAS1 - orthologs
Gene location (Human) Chr. Chromosome 4 (human) Band 4q21.21 Start 78,057,323 bp End 78,544,269 bp
Gene location (Mouse) Chr. Chromosome 5 (mouse) Band 5|5 E3 Start 96,521,814 bp End 96,932,587 bp
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in germinal epithelium parietal pleura renal medulla Brodmann area 23 visceral pleura middle temporal gyrus lateral nuclear group of thalamus epithelium of colon placenta biceps brachii Top expressed in fourth ventricle choroid plexus of fourth ventricle molar squamous epithelium hand choroidal fissure mesothelium pericardium atrium mesothelium of peritoneum More reference expression data BioGPS n/a
Gene ontology Molecular function metal ion binding extracellular matrix structural constituent Cellular component plasma membrane extracellular matrix membrane basement membrane integral component of membrane collagen-containing extracellular matrix Biological process skin development embryonic limb morphogenesis protein transport metanephros morphogenesis morphogenesis of an epithelium roof of mouth development cell communication Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 80144 231470 Ensembl ENSG00000138759 ENSMUSG00000034687 UniProt Q86XX4 Q80T14 RefSeq (mRNA) NM_001166133 NM_020875 NM_025074 NM_032863 NM_206841 NM_175473 RefSeq (protein) NP_001159605 NP_079350 NP_780682 Location (UCSC) Chr 4: 78.06 – 78.54 Mb Chr 5: 96.52 – 96.93 Mb PubMed search
Wikidata
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Extracellular matrix protein FRAS1 is a protein that in humans is encoded by the FRAS1 (Fraser syndrome 1) gene. This gene encodes an extracellular matrix protein that appears to function in the regulation of epidermal-basement membrane adhesion and organogenesis during development.

Clinical significance

Mutations in this gene have been observed to cause fraser syndrome.

See also

• Fraser syndrome

Further reading

• Short K, Wiradjaja F, Smyth I (2007). "Let's stick together: the role of the Fras1 and Frem proteins in epidermal adhesion". IUBMB Life. 59 (7): 427–35. doi:10.1080/15216540701510581. PMID 17654118.
• Long J, Wei Z, Feng W, et al. (2008). "Supramodular nature of GRIP1 revealed by the structure of its PDZ12 tandem in complex with the carboxyl tail of Fras1". J. Mol. Biol. 375 (5): 1457–68. doi:10.1016/j.jmb.2007.11.088. hdl:10397/14647. PMID 18155042.
• Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
• Jugessur A, Shi M, Gjessing HK, et al. (2010). "Maternal genes and facial clefts in offspring: a comprehensive search for genetic associations in two population-based cleft studies from Scandinavia". PLoS ONE. 5 (7): e11493. Bibcode:2010PLoSO...511493J. doi:10.1371/journal.pone.0011493. PMC 2901336. PMID 20634891.{{cite journal}}: CS1 maint: unflagged free DOI (link)
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
• Medland SE, Nyholt DR, Painter JN, et al. (2009). "Common variants in the trichohyalin gene are associated with straight hair in Europeans". Am. J. Hum. Genet. 85 (5): 750–5. doi:10.1016/j.ajhg.2009.10.009. PMC 2775823. PMID 19896111.
• Vrontou S, Petrou P, Meyer BI, et al. (2003). "Fras1 deficiency results in cryptophthalmos, renal agenesis and blebbed phenotype in mice" (PDF). Nat. Genet. 34 (2): 209–14. doi:10.1038/ng1168. PMID 12766770.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
• Kimura K, Wakamatsu A, Suzuki Y, et al. (2006). "Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes". Genome Res. 16 (1): 55–65. doi:10.1101/gr.4039406. PMC 1356129. PMID 16344560.
• Docherty SJ, Kovas Y, Petrill SA, Plomin R (2010). "Generalist genes analysis of DNA markers associated with mathematical ability and disability reveals shared influence across ages and abilities". BMC Genet. 11: 61. doi:10.1186/1471-2156-11-61. PMC 2909150. PMID 20602751.{{cite journal}}: CS1 maint: unflagged free DOI (link)
• Gattuso J, Patton MA, Baraitser M (1987). "The clinical spectrum of the Fraser syndrome: report of three new cases and review". J. Med. Genet. 24 (9): 549–55. doi:10.1136/jmg.24.9.549. PMC 1050267. PMID 3118036.
• van Haelst MM, Maiburg M, Baujat G, et al. (2008). "Molecular study of 33 families with Fraser syndrome new data and mutation review". Am. J. Med. Genet. A. 146A (17): 2252–7. doi:10.1002/ajmg.a.32440. PMID 18671281.
• Nagase T, Kikuno R, Ishikawa K, et al. (2000). "Prediction of the coding sequences of unidentified human genes. XVII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 7 (2): 143–50. doi:10.1093/dnares/7.2.143. PMID 10819331.