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Collagen, type III, alpha 1

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COL3A1
Available structures
PDBOrtholog search: PDBe RCSB
Identifiers
AliasesCOL3A1, EDS4A, collagen type III alpha 1, collagen type III alpha 1 chain, EDSVASC, PMGEDSV
External IDsOMIM: 120180; MGI: 88453; HomoloGene: 55433; GeneCards: COL3A1; OMA:COL3A1 - orthologs
Orthologs
SpeciesHumanMouse
Entrez
Ensembl
UniProt
RefSeq (mRNA)

NM_000090
NM_001376916

NM_009930

RefSeq (protein)

NP_000081

NP_034060

Location (UCSC)Chr 2: 188.97 – 189.01 MbChr 1: 45.35 – 45.39 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

Collagen alpha-1(III) chain is a protein that in humans is encoded by the COL3A1 gene,[5][6] which is located on chromosome 2.

Function

Collagen alpha-1(III) chain is a precursor to collagen III,[7] a protein that is found in extensible connective tissues such as skin, lung, and the vascular system, frequently in association with type I collagen. Although alternate transcripts have been detected for this gene, they are the result of mutations; these mutations alter splicing, often leading to the exclusion of multiple exons.[8]

Type-III collagen is a fibrous scleroprotein in bone, cartilage, dentin, tendon, bone marrow stroma and other connective tissue; it yields gelatin on boiling.

Scleroprotein is a simple protein found in horny and cartilaginous tissues and in the lens of the eye.

Clinical significance

Mutations in this gene are associated with type III and IV Ehlers-Danlos syndrome and with aortic and arterial aneurysms.

See also

Further reading

Template:PBB Controls

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000168542Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026043Ensembl, May 2017
  3. ^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  4. ^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
  5. ^ Janeczko RA, Ramirez F (Oct 1989). "Nucleotide and amino acid sequences of the entire human alpha 1 (III) collagen". Nucleic Acids Res. 17 (16): 6742. doi:10.1093/nar/17.16.6742. PMC 318382. PMID 2780304.
  6. ^ Superti-Furga A, Gugler E, Gitzelmann R, Steinmann B (Jun 1988). "Ehlers-Danlos syndrome type IV: a multi-exon deletion in one of the two COL3A1 alleles affecting structure, stability, and processing of type III procollagen". J Biol Chem. 263 (13): 6226–32. PMID 2834369.
  7. ^ Mayne, Richard; Burgeson, Robert E. Structure and Function of Collagen Types. Academic Press, Inc. ISBN 0-12-481280-5.
  8. ^ "Entrez Gene: COL3A1 collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)".