TPSB2

TPSB2
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	1A0L, 2BM2, 2FPZ, 2FS8, 2FS9, 2FWW, 2FXR, 2GDD, 2ZA5, 3V7T
Identifiers
Aliases	TPSB2, TPS2, tryptaseB, tryptaseC, tryptase beta 2 (gene/pseudogene), tryptase beta 2
External IDs	OMIM: 191081; MGI: 96942; HomoloGene: 55729; GeneCards: TPSB2; OMA:TPSB2 - orthologs
Gene location (Human)
Chr.	Chromosome 16 (human)
End	1,230,184 bp
Gene location (Mouse)
Chr.	Chromosome 17 (mouse)
End	25,588,072 bp
RNA expression pattern
	Top expressed in
	gastric mucosa; ; gallbladder; ; right lung; ; mucosa of transverse colon; ; skin of leg; ; body of stomach; ; urinary bladder; ; fundus; ; subcutaneous adipose tissue; ; skin of abdomen;
	Top expressed in
	dermis; ; lip; ; Ileal epithelium; ; lactiferous gland; ; foreskin; ; muscle of thigh; ; extraocular muscle; ; skin of back; ; ankle; ; gastric mucosa;
	More reference expression data
	n/a
Gene ontology
Molecular function	peptidase activity; serine-type peptidase activity; protein binding; hydrolase activity; serine-type endopeptidase activity;
Cellular component	extracellular region; extracellular matrix; extracellular space; collagen-containing extracellular matrix;
Biological process	proteolysis;
	Sources:Amigo / QuickGO
Orthologs
	64499
	17229
	ENSG00000197253
	ENSMUSG00000033825
	P20231
	P21845
	NM_024164
	NM_010781
	NP_077078
	NP_034911
	Wikidata
View/Edit Human	View/Edit Mouse

Tryptase beta-2, also known as tryptase II, is an enzyme that in humans is encoded by the TPSB2 gene.^[5]

Function

Tryptases comprise a family of trypsin-like serine proteases, the peptidase family S1. Tryptases are enzymatically active only as heparin-stabilized tetramers, and they are resistant to all known endogenous proteinase inhibitors. Several tryptase genes are clustered on chromosome 16p13.3. These genes are characterized by several distinct features. They have a highly conserved 3' UTR and contain tandem repeat sequences at the 5' flank and 3' UTR which are thought to play a role in regulation of the mRNA stability. These genes have an intron immediately upstream of the initiator Met codon, which separates the site of transcription initiation from protein coding sequence. This feature is characteristic of tryptases but is unusual in other genes. The alleles of this gene exhibit an unusual amount of sequence variation, such that the alleles were once thought to represent two separate genes, beta II and beta III. Beta tryptases appear to be the main isoenzymes expressed in mast cells, whereas in basophils, alpha-tryptases predominate. Tryptases have been implicated as mediators in the pathogenesis of asthma and other allergic and inflammatory disorders.^[5]

References

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000197253 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000033825 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ ^a ^b "Entrez Gene: tryptase beta 2 (gene/pseudogene)".

Miller JS, Moxley G, Schwartz LB (1990). "Cloning and characterization of a second complementary DNA for human tryptase". J. Clin. Invest. 86 (3): 864–70. doi:10.1172/JCI114786. PMC 296804. PMID 2203827.
Hallgren J, Lindahl S, Pejler G (2005). "Structural requirements and mechanism for heparin-dependent activation and tetramerization of human betaI- and betaII-tryptase". J. Mol. Biol. 345 (1): 129–39. doi:10.1016/j.jmb.2004.10.029. PMID 15567416.
Sommerhoff CP, Bode W, Matschiner G, et al. (2000). "The human mast cell tryptase tetramer: a fascinating riddle solved by structure". Biochim. Biophys. Acta. 1477 (1–2): 75–89. doi:10.1016/s0167-4838(99)00265-4. PMID 10708850.
Huang C, Li L, Krilis SA, et al. (1999). "Human tryptases alpha and beta/II are functionally distinct due, in part, to a single amino acid difference in one of the surface loops that forms the substrate-binding cleft". J. Biol. Chem. 274 (28): 19670–6. doi:10.1074/jbc.274.28.19670. PMID 10391906.
Caughey GH, Raymond WW, Blount JL, et al. (2000). "Characterization of human gamma-tryptases, novel members of the chromosome 16p mast cell tryptase and prostasin gene families". J. Immunol. 164 (12): 6566–75. doi:10.4049/jimmunol.164.12.6566. PMID 10843716.
Vanderslice P, Ballinger SM, Tam EK, et al. (1990). "Human mast cell tryptase: multiple cDNAs and genes reveal a multigene serine protease family". Proc. Natl. Acad. Sci. U.S.A. 87 (10): 3811–5. doi:10.1073/pnas.87.10.3811. PMC 53993. PMID 2187193.
Guida M, Riedy M, Lee D, Hall J (2000). "Characterization of two highly polymorphic human tryptase loci and comparison with a newly discovered monkey tryptase ortholog". Pharmacogenetics. 10 (5): 389–96. doi:10.1097/00008571-200007000-00002. PMID 10898108.
Gerhard DS, Wagner L, Feingold EA, et al. (2004). "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928. PMID 15489334.
Blom T, Hellman L (1993). "Characterization of a tryptase mRNA expressed in the human basophil cell line KU812". Scand. J. Immunol. 37 (2): 203–8. doi:10.1111/j.1365-3083.1993.tb01757.x. PMID 8434231.
Pallaoro M, Fejzo MS, Shayesteh L, et al. (1999). "Characterization of genes encoding known and novel human mast cell tryptases on chromosome 16p13.3". J. Biol. Chem. 274 (6): 3355–62. doi:10.1074/jbc.274.6.3355. PMID 9920877.
Caughey GH (2002). "New developments in the genetics and activation of mast cell proteases". Mol. Immunol. 38 (16–18): 1353–7. doi:10.1016/S0161-5890(02)00087-1. PMID 12217407.
Akin C, Soto D, Brittain E, et al. (2007). "Tryptase haplotype in mastocytosis: relationship to disease variant and diagnostic utility of total tryptase levels". Clin. Immunol. 123 (3): 268–71. doi:10.1016/j.clim.2007.02.007. PMC 1949411. PMID 17449330.
Strausberg RL, Feingold EA, Grouse LH, et al. (2002). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Sommerhoff CP, Bode W, Pereira PJ, et al. (1999). "The structure of the human betaII-tryptase tetramer: fo(u)r better or worse". Proc. Natl. Acad. Sci. U.S.A. 96 (20): 10984–91. doi:10.1073/pnas.96.20.10984. PMC 34230. PMID 10500112.
Daniels RJ, Peden JF, Lloyd C, et al. (2001). "Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16". Hum. Mol. Genet. 10 (4): 339–52. doi:10.1093/hmg/10.4.339. PMID 11157797.
Trivedi NN, Tamraz B, Chu C, et al. (2009). "Human subjects are protected from mast cell tryptase deficiency despite frequent inheritance of loss-of-function mutations". J. Allergy Clin. Immunol. 124 (5): 1099–1105.e4. doi:10.1016/j.jaci.2009.07.026. PMC 2783561. PMID 19748655.
Pereira PJ, Bergner A, Macedo-Ribeiro S, et al. (1998). "Human beta-tryptase is a ring-like tetramer with active sites facing a central pore". Nature. 392 (6673): 306–11. doi:10.1038/32703. PMID 9521329.
Wu C, Ma MH, Brown KR, et al. (2007). "Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening". Proteomics. 7 (11): 1775–85. doi:10.1002/pmic.200601006. PMID 17474147.

This article incorporates text from the United States National Library of Medicine, which is in the public domain.

This article on a gene on human chromosome 16 is a stub. You can help Wikipedia by expanding it.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000197253 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000033825 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[entrez-5] "Entrez Gene: tryptase beta 2 (gene/pseudogene)".

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v t e Endopeptidases: serine proteases/serine endopeptidases (EC 3.4.21)
Digestive enzymes	Enteropeptidase Trypsin Chymotrypsin Elastase Neutrophil Pancreatic
Coagulation	factors: Thrombin Factor VIIa Factor IXa Factor Xa Factor XIa Factor XIIa Kallikrein PSA KLK1 KLK2 KLK3 KLK4 KLK5 KLK6 KLK7 KLK8 KLK9 KLK10 KLK11 KLK12 KLK13 KLK14 KLK15 fibrinolysis: Plasmin Plasminogen activator Tissue plasminogen activator Urinary plasminogen activator
Complement system	Factor B Factor D Factor I MASP MASP1 MASP2 C3-convertase
Other immune system	Chymase Granzyme Tryptase Proteinase 3/Myeloblastin
Venombin	Ancrod Batroxobin
Other	Acrosin Prolyl endopeptidase Pronase Proprotein convertases 1 2 Prostasin Reelin Subtilisin/Furin/S1P4 Sedolisin/TPP1 Streptokinase Cathepsin A G

v t e Enzymes
Activity	Active site Binding site Catalytic triad Oxyanion hole Enzyme promiscuity Diffusion-limited enzyme Cofactor Enzyme catalysis
Regulation	Allosteric regulation Cooperativity Enzyme inhibitor Enzyme activator
Classification	EC number Enzyme superfamily Enzyme family List of enzymes
Kinetics	Enzyme kinetics Eadie–Hofstee diagram Hanes–Woolf plot Lineweaver–Burk plot Michaelis–Menten kinetics
Types	EC1 Oxidoreductases (list) EC2 Transferases (list) EC3 Hydrolases (list) EC4 Lyases (list) EC5 Isomerases (list) EC6 Ligases (list) EC7 Translocases (list)

Function

References

Further reading