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:I'll be much more inclined to agree on the significance and relevance once the paper has been peer reviewed and approved for publication. Until then, there arguably aren't any "findings" we can reliably source to Bloom (since it's [[WP:SELFPUB]]). [[User:Bakkster Man|Bakkster Man]] ([[User talk:Bakkster Man|talk]]) 14:14, 7 July 2021 (UTC)
:I'll be much more inclined to agree on the significance and relevance once the paper has been peer reviewed and approved for publication. Until then, there arguably aren't any "findings" we can reliably source to Bloom (since it's [[WP:SELFPUB]]). [[User:Bakkster Man|Bakkster Man]] ([[User talk:Bakkster Man|talk]]) 14:14, 7 July 2021 (UTC)
:CutePeach, you really need to keep your talk page discussions focused on ''actual'' article text and cite ''actual'' reliable sources, rather than just commenting generally and offering your opinion of the state of affairs. All the text in the paragraph is reliably sourced, as far as I can see. If there is text that is wrong or should be reworded, propose an alternative and give reliable sources. That's how it works. If you do continue to soapbox on these pages, then I think I shall be asking for admin intervention. It isn't productive to turn these pages into a forum where two sides debate Covid 19's origins for themselves. -- [[User:Colin|Colin]]°[[User talk:Colin|<sup>Talk</sup>]] 14:25, 7 July 2021 (UTC)
:CutePeach, you really need to keep your talk page discussions focused on ''actual'' article text and cite ''actual'' reliable sources, rather than just commenting generally and offering your opinion of the state of affairs. All the text in the paragraph is reliably sourced, as far as I can see. If there is text that is wrong or should be reworded, propose an alternative and give reliable sources. That's how it works. If you do continue to soapbox on these pages, then I think I shall be asking for admin intervention. It isn't productive to turn these pages into a forum where two sides debate Covid 19's origins for themselves. -- [[User:Colin|Colin]]°[[User talk:Colin|<sup>Talk</sup>]] 14:25, 7 July 2021 (UTC)
::{{re|Bakkster Man}}, I hear you, but this case is similar to the Pangolin paper which did not provide any supporting data, which we have discussed before without resolution [https://en.wikipedia.org/w/index.php?title=Talk:COVID-19_pandemic&diff=prev&oldid=1021048778#Suggestion_#5]. This is a matter of [[Data publishing]], and many journals today require supporting data, yet the authors of these papers haven’t responded to anyone on why they deleted their sequence data. If Bloom’s paper passes peer review, it will mount pressure on the SMALL journal to retract Wuhan University researcher’s paper, which will give us another sentence to add. We will also have more to write about the phylogenetic analysis, but not more than a sentence, as it's not transformative. This incident shows how hungry the scientific community is for data, which the Chinese Government continues withholding, which is why I and other editors have countered other editors here claiming Bloom’s findings aren’t significant or relevant to the subject of this page. [[User:CutePeach|CutePeach]] ([[User talk:CutePeach|talk]]) 15:03, 7 July 2021 (UTC)
::{{re|Colin}} perhaps you’ve missed parts of the discussion here about the [[WP:V]] of the phrase {{u|Thucydides411}} added to the Independent Investigations part of the article, and the little "failed verification" tag that {{u|ProcrastinatingReader}} added to it? I would edit it out myself, but I don't want to get maligned and banned in ANI or ARE. This is a seriously egregious case of [[WP:OR]] which goes to show what the larger problem is here. [[User:CutePeach|CutePeach]] ([[User talk:CutePeach|talk]]) 15:03, 7 July 2021 (UTC)


== Cnet article ==
== Cnet article ==

Revision as of 15:03, 7 July 2021


Origins of COVID-19: Current consensus

  1. There is no consensus on whether the lab leak theory is a "conspiracy theory" or a "minority scientific viewpoint". (RfC, February 2021)
  2. There is consensus against defining "disease and pandemic origins" (broadly speaking) as a form of biomedical information for the purpose of WP:MEDRS. However, information that already fits into biomedical information remains classified as such, even if it relates to disease and pandemic origins (e.g. genome sequences, symptom descriptions, phylogenetic trees). (RfC, May 2021)
  3. In multiple prior non-RFC discussions about manuscripts authored by Rossana Segreto and/or Yuri Deigin, editors have found the sources to be unreliable. Specifically, editors were not convinced by the credentials of the authors, and concerns were raised with the editorial oversight of the BioEssays "Problems & Paradigms" series. (Jan 2021, Jan 2021, Jan 2021, Feb 2021, June 2021, ...)
  4. The consensus of scientists is that SARS-CoV-2 is likely of zoonotic origin. (January 2021, May 2021, May 2021, May 2021, June 2021, June 2021, WP:NOLABLEAK (frequently cited in discussions))
  5. The March 2021 WHO report on the origins of SARS-CoV-2 should be referred to as the "WHO-convened report" or "WHO-convened study" on first usage in article prose, and may be abbreviated as "WHO report" or "WHO study" thereafter. (RfC, June 2021)
  6. The "manufactured bioweapon" idea should be described as a "conspiracy theory" in wiki-voice. (January 2021, February 2021, May 2021, May 2021, June 2021, June 2021, June 2021, June 2021, July 2021, July 2021, July 2021, August 2021)
  7. The scientific consensus (and the Frutos et al. sources ([1][2]) which support it), which dismisses the lab leak, should not be described as "based in part on Shi [Zhengli]'s emailed answers." (RfC, December 2021)
  8. The American FBI and Department of Energy finding that a lab leak was likely should not be mentioned in the lead of COVID-19 lab leak theory, because it is WP:UNDUE. (RFC, October 2023)
  9. The article COVID-19 lab leak theory may not go through the requested moves process between 4 March 2024 and 3 March 2025. (RM, March 2024)

Last updated (diff) on 15 March 2024 by Novem Linguae (t · c)

Why declare a "consensus" on the origin, given that all options are still open

Pre-break

As a scientific researcher (not a virologist), I feel puzzled to understand the hurry that Wikipedia editors have in declaring the virus to have a zoonotic origin.

Partly, this phenomenon is fueled by the unexplainable hurry that Andersen et al., 2020 had in trying to defend the zootonic origin immediately in March 2020. Then, the dominant segments of the international community (including WHO), arguably and justifiably fearing that a man-made likelihood would ignite racial biases, released bold statements in defending such premature hypotheses of a natural origin.

However, recent investigations by multiple expert bodies raise several questions on the hypotheses by Andersen et al., 2020. Especially, the work based its judgement on a series of assumptions that to date are not validated despite considerable research efforts during the last year (e.g. traces of intermediate hosts, etc).

When we talk about the likelihood of an event, we should be aware of the axioms of probability. Following Bayesian principles, a prior probability (i.e. natural origin hypothesis) should be altered following new observations (i.e. deriving a posterior probability).

My question for the Wiki editors is: one year after the publication by Andersen et al., - are there any new supportive evidences to validate its assumptions, or - are there more evidences to the contrary, i.e. that sampled evidence does not validate its assumptions?

As the question was retorical (it is obvious that researchers have now more questions and doubts given new data), then, at least the article should also alter its pitch. E.g. in the tone: The origin of the virus was initially thought to be zoonotic, but further recent evidences fell short in validating the initial assumptions. As such, the true origin of the virus outbreak remains unknown and diverse investigations are either planned, or ongoing.

In addition, personally I feel the pitch of the current article is a bit childish in essense. Because the virus can be both zoonotic and released from a lab, e.g. one possible likelihood out of many: a researcher taking a sample from a bat violates the safety protocols and gets infected. In that sense, stating the origin as "either zoonotic or conspiracy" seems uncomprehensible. The article does not differentiate a core concept: the biological origin of the virus (hypothesis: a bat virus), from the origin of the outbreak independent on the origin of the virus (hypothesis: a natural bat virus accidentally infecting a lab staff in Wuhan).

2003:C0:6F31:7E57:745F:555:D36D:8B88 (talk) 21:33, 31 May 2021 (UTC) 2003:C0:6F31:7E57:745F:555:D36D:8B88 (talk) has made few or no other edits outside this topic. [reply]

The above is all WP:OR. You can claim to be whoever you want, but here on Wikipedia we rely on reliable sources. Papers published in peer-reviewed journals by virologists and experts in infectious diseases seem to agree that the virus very likely has a zoonotic origin. We report that. That this happens not to be the point of view of some politicians and that it is being promoted unduly (by cherry-picking [circumstantial, at best] "evidence" to fit a conclusion: the anti-scientific method) is misinformation, and you appear to have fallen prey to it. Researchers asking for more thorough investigation (including to more thoroughly determine a likely zoonotic origin, ex. [3]) does not change that. In any case, we follow, not lead, the reliable sources, and so far I haven't found a single credible paper which argues for the lab leak. RandomCanadian (talk / contribs) 21:58, 31 May 2021 (UTC)[reply]
@RandomCanadian Why did you revert the statement attributed to Biden, cited to Reuters? Your edit comment makes no sense in this context. It is relevant for the Biden Administration section that he has stated his national security staff does not believe there is sufficient information to assess one theory to be more likely than the other. It is not stated in wikivoice. Terjen (talk) 23:23, 31 May 2021 (UTC)[reply]
@Terjen: The problem is that while Biden's statement is notable (and I left it there), the reasons behind it make it so that too much text is being spend describing this. See WP:UNDUE, particularly the bit about WP:PROPORTION - we can mention the reports without giving them too much attention. RandomCanadian (talk / contribs) 00:17, 1 June 2021 (UTC)[reply]
@RandomCanadian We can condense the sentence to reduce the text while restoring their attributed significant viewpoint that there is insufficient evidence to determine either hypothesis to be more likely. Terjen (talk) 00:58, 1 June 2021 (UTC)[reply]
@RandomCanadian Having addressed your concerns about spending too much text, I suggest reintroducing the sentence as "stating his national security staff says there is insufficient evidence to determine either hypothesis to be more likely." Terjen (talk) 20:12, 1 June 2021 (UTC)[reply]
 Done Terjen (talk) 01:58, 3 June 2021 (UTC)[reply]
On the other hand, it appears we give this way too little weight given its coverage in WP:RS press. Terjen (talk) 00:59, 1 June 2021 (UTC)[reply]
@Terjen: The problem with that particular suggestion is that the popular press are reporting a (notable, but political) view which is very much at odds with that of the scientific literature, which is mostly giving short shrift to it. Hence we need to balance the coverage of science vs politics, and ideally not unduly report the view of politicians (who are not qualified to do such things) on scientific matters. We can mention the most significant events (objections to WHO report, letter in Science, Biden) without quoting them for opinions. Note that if we quote Biden saying that there's not enough evidence, we also need to quote scientists saying that the evidence we do have points to a natural origin entirely consistent with previous outbreaks. RandomCanadian (talk / contribs) 01:30, 1 June 2021 (UTC)[reply]
We could follow with a viewpoint based on e.g. this NYT article on President Biden’s call for a more rigorous investigation, with scientists cautioning against expecting an answer in the three-month time frame, and although becoming more open to expressing uncertainties about the origins of the virus, still noting the lack of direct evidence for a lab leak. Terjen (talk) 01:52, 1 June 2021 (UTC)[reply]
I am not really sure that you are fully aware of the scientific discourse regarding the origin of the virus. The world's top-most scientific authorities recently sent a letter to the Science Magazine (published May 2021, link https://science.sciencemag.org/content/372/6543/694.1) asking for an investigation on the origin and stating that "Yet more investigation is still needed to determine the origin of the pandemic. Theories of accidental release from a lab and zoonotic spillover both remain viable. Knowing how COVID-19 emerged is critical for informing global strategies to mitigate the risk of future outbreaks.". The authors are leading scientists from MIT, Harvard, Stanford, Cambridge, Yale, including the world's most knowledgeable experts on coronaviruses, and Science is the ultimate scientific venue. Please explain to the readers, what do Wiki editors know better than the experts in the field, given that you jumped into the conclusion of a zoonotic origin? Because, there is NO consensus among the scientific community in 2021 on the origin, contrary to the initial beliefs in 2020. At the current shape, this article is pure POV, unless it is rewritten from scratch to balance its tone in the form of "The scientific community has not reached a consensus on the origin of the virus".
P.s.: The letter of the scientists is not an isolated opinion letter, but came as a consequence of several research papers questioning the virus' origin. For an instance: https://onlinelibrary.wiley.com/doi/full/10.1002/bies.202000240
2003:C0:6F31:7E57:9595:5CD6:5CFE:6A9C (talk) 08:25, 1 June 2021 (UTC)[reply]
Thought I'd point out this opposing essay, written in response to the one you've cited. [4] Bakkster Man (talk) 12:06, 1 June 2021 (UTC)[reply]
A response to a scientific work is fine, and a healthy way of treating disagreements through scientific argumentation. What is not fine, is WP taking a side on the discussion (fanatically supporting the zoonotic version), while the experts have not reached a consensus. I assume there is no sane editor here, independent of his/her seniority that pretends to have the expertise of arguing against the 18 respected scientists from Harvard, MIT, Stanford, etc. (top-most authorities in the field) who leave the leak version on the table, and heavily criticize the WHO investigation as biased. 2003:C0:6F31:7E57:A506:11F9:ECEA:43E4 (talk) 13:11, 1 June 2021 (UTC)[reply]
Perhaps we need to step back and figure out which facets of this question we're discussing, because it's easy to talk past one another. If we're talking about 'fanatical support', specifically meaning going to the extent of stating there has been no meaningful science performed or rational reason to believe the lab leak is possible/likely, then we probably agree. If we're talking about whether the majority of scientists believe that the virus was most likely natural in origin (even if that turns out to be wrong), and whether such a significantly held majority opinion is notable even though inconclusive, then we might disagree.
One of my major concerns (in both directions) is not overstating people's actual opinions, by reading something else into them. We've seen it with the recent Fauci comments, we've seen it with the Tedros comments, and we seem to be seeing it now with Baric and the Science letter: “I really believe that the genetic sequence for sars-CoV-2 really points to a natural-origin event from wildlife”.[5] I've found it better to discuss specifics, like what should actually change on the article, rather than broad strokes like "the Science letter is a monolithic opinion, the signers are the top in their field, and it was based on a particular paper in BioEssays" that don't appear to accurately reflect the sources. Bakkster Man (talk) 13:57, 1 June 2021 (UTC)[reply]
The specifics would be: rephrase all sections where the zoonotic origin is qualified as being the overwhelming consensus of the scientific community. Change to a smoother pitch, e.g. "While many scientists believe a zoonotic origin is the most likely outcome, others have declared that both a lab leak and a zoonotic spillover are viable options." 2003:C0:6F31:7E13:6D15:D6AC:83A6:6D0D (talk) 20:36, 1 June 2021 (UTC)[reply]
(edit conflict)The paper by Deigin (from that Twitter group) and Segretto is about a view (possible "genetic manipulation", involving furin cleavage sites [present in many other natural viruses]) widely held to be discredited by most relevant experts (Deigin does not appear to have any valid scientific credentials in any case, and is aslo part of a Twitter group who've been actively promoting misinformation about the origin of COVID...). The paper in Bioessays is, as the journal name implies, an essay and not a review paper, so a rather weak source for an exceptional claim. In addition, the claim it makes, that of genetic manipulation, had already been ruled out before it was even published by Andersen et al. (an influential paper cited by more than 1400 fellow scientists), see this (written by three [micro-]biologists), which explicitly (like many other more recent sources, including the WHO report) states:

In a Nature Medicine study, Kristian Andersen et al. 18 categorically refute the idea that the virus has been engineered, based on the comparative analysis of coronavirus genomic data. [...] Other epidemiologists have also publicly discredited theories that the virus emerged from a laboratory environment, although it cannot be ruled out entirely, highlighted by the active discussion triggered by the Nature Medicine study on PubPeer 20 and elsewhere.

So, the "paper" you cite is not really a credible paper (as I was saying, "there are no credible papers") nor can it be cited to support anything but the opinions of its authors (since it is an essay), whose view is not significant enough and is already discredited anyway. As to the Science letter, you're not giving all of the context behind that one, either (some signatories, such as Baric, support a more thorough investigation [to make all this nonsense distraction stop?] while also agreeing that the origin is most likely zoonotic). Also, per the same FEBS paper I was just citing:

Whether the now-infamous seafood market is the site that ‘patient zero’ or the index case became infected remains inconclusively known, but the scientific consensus on the origin of SARS-CoV-2 is that, like other coronaviruses, it evolved naturally and was transferred to humans via an animal.

This is also in agreement with many more recent reports in the press (scientific or popular), for example:
  • Taylor, Adam. "Analysis | The Wuhan lab-leak theory is getting more attention. That's because key evidence is still missing". Washington Post.
  • Beaumont, Peter (2021-05-27). "Did Covid come from a Wuhan lab? What we know so far". The Guardian.
  • Maxmen, Amy (2021-05-27). "Divisive COVID 'lab leak' debate prompts dire warnings from researchers". Nature. doi:10.1038/d41586-021-01383-3.
So I suggest you go read that (and look for scientific papers on PubMed, not Twitter) before arguing for false balance based on an extremely dubious paper. RandomCanadian (talk / contribs) 13:19, 1 June 2021 (UTC)[reply]
In addition the whole thing about an "engineered" furin cleavage site (as promoted in that essay you cite) is bollocks, see Talk:Severe_acute_respiratory_syndrome_coronavirus_2#Rarity_of_Furin_Cleavage_Site_is_inaccurately_described_here for some credible sources on that. RandomCanadian (talk / contribs) 13:30, 1 June 2021 (UTC)[reply]

Yet several of those papers claiming the lab leak origin at not peer reviewed, plus their authors are known cranks who advocated against masks and vaccines. See here.--49.195.5.107 (talk) 12:01, 1 June 2021 (UTC)[reply]

Incorrect, the BioEssays journal is peer-reviewed. Personal allegations against scientists outside their technical work are not an argument we should seriously consider. Especially, given that the Science letter authors are the most respected scientific authorities in the field. 2003:C0:6F31:7E57:A506:11F9:ECEA:43E4 (talk) 13:05, 1 June 2021 (UTC) 2003:C0:6F31:7E57:A506:11F9:ECEA:43E4 (talk) has made few or no other edits outside this topic. [reply]
Reviewed or not, it's an essay which argues for a discredited position. RandomCanadian (talk / contribs) 13:19, 1 June 2021 (UTC)[reply]

David Gorski has a look at the lab leak idea on Science-Based Medicine [6]. The start of the article is great:

whenever there is a major outbreak, epidemic, or pandemic of infectious disease, one conspiracy theory always—and I do mean always—arises. That conspiracy theory is that the causative microbe was developed in a laboratory and/or escaped a laboratory. HIV, H1N1, the original SARS, Ebola virus, every single one of them gave birth to such conspiracy theories.

Read the whole article. This is how real experts handle that sort of stuff, and this is the attitude Wikipedia should take. Use Gorski as a source, ignore all the ignoramuses, be they named Biden or Wade, and all those people who have nothing except opinions. --Hob Gadling (talk) 13:50, 1 June 2021 (UTC)[reply]

See also WP:ARSEHOLES - opinions are just that. RandomCanadian (talk / contribs) 14:05, 1 June 2021 (UTC)[reply]
I’m not sure “Here! Just use this relatively obscure blog!” is the appropriate response to this... Science-Based Medicine =/= science based medicine. Horse Eye's Back (talk) 14:21, 1 June 2021 (UTC)[reply]
SBM isn't "obscure" AFAICS. Although, as I've said, we should use better sources if available (recognising that many of them do not waste their time with this shit). RandomCanadian (talk / contribs) 14:28, 1 June 2021 (UTC)[reply]
Thats why I said “relatively obscure.” I don’t mean to hate on them but its just a very odd response to say "Use Gorski as a source, ignore all the ignoramuses, be they named Biden or Wade, and all those people who have nothing except opinions.” I don’t care how great Gorski is thats just not right and not how things are done here. I would also note that the vast majority of what Gorski writes on the blog is explicitly presented as his opinion, its just not on the same level as good peer reviewed work (whether it be by Gorski et al or anyone else). Horse Eye's Back (talk) 14:32, 1 June 2021 (UTC)[reply]
I broadly agree. He's presenting the skeptic's point of view, which is not necessarily the same as WP:NPOV or the majority's point of view. And, as I've suggested elsewhere, it can be viewed as being in opposition with the WHO study we have (as of late) cited as indicative of the majority view, not in agreement with it. At least, for the quote it's used for. Bakkster Man (talk) 14:47, 1 June 2021 (UTC)[reply]
"From the very beginning, the general scientific hypothesis has been that, while it is possible that SARS-CoV-2 escaped from a lab, it’s far more likely that it had a natural origin." seems to be in broad agreement with the WHO report, at least as a conclusion. Of course, we have better sources than Gorski for that, and the rest goes better in the article about misinformation to debunk the misinformation, as I've said. RandomCanadian (talk / contribs) 14:50, 1 June 2021 (UTC)[reply]
Note that I didn't say it couldn't be used as a source which was WP:NPOV, only that the the two weren't so synonymous that we could pick any quote from the article and claim it was WP:NPOV. Notably the "in essence, a conspiracy theory" quote proposed at COVID-19 misinformation.
Otherwise, I think we agree: we have better sources than Gorski for that. We have good WP:SCHOLARSHIP to cite for most of our claims, and Gorski's debunking is most useful for the context surrounding the who/what/when/where/why of misinformation spread, leaving those strong MEDLINE secondary sources to describe what is actually misinformation. Bakkster Man (talk) 15:01, 1 June 2021 (UTC)[reply]
not how things are done here Actually, ignoring laymen's takes (Biden and Wade are laymen) when we have sources written by scientists working in the field the article is about is exactly how things are done here. Of course, if there are sources which are even better than Gorski, we should use those, but we should not use pieces written by people who are not professional medical scientists, since they are worse than Gorski. Science-Based Medicine is categorized as a reliable source in WP:RSP, and they are experts on medical fringe topics, which this is. Wade is just an expert on writing books the scientists he quotes in them disagree with, and Biden is just someone who was more popular than a <accurate but very unencyclopedic expletive deleted> last year. Why anyone would be interested in what they think on this subject is beyond me.
Also, Gorski analyzes exactly those sources that fervent lab-leak proponents, fervent the-lab-leak-idea-is-plausible proponents, fervent the-lab-leak-idea-is-not-fringe proponents and fervent fence-sitting proponents have been pushing here for weeks. What he writes is not just a soundbite, like an out-of-context Fauci quote some journalist decided to amplify. It is a thorough analysis of the most crucial sources on the lab leak idea, and that makes it better than the usual boring, shallow, superficial show-of-hands crap which will tell you only who likes the idea and who does not, and maybe how much they like or dislike it, but ignores the actual reasoning behind the positions. Quoting the reasoning will be useful to those readers who are smart enough to decide based on reasoning instead of just following or opposing whatever the majority says, following or opposing whatever the Republicans say, or whoever else, depending on one's taste.
The "it's just the skeptic POV" reasoning is a trope everybody who edits fringe articles knows well: "homeopathy does not work? that's just what the skeptics say!" Skeptics are just scientists who look at fringe ideas instead of ignoring them. Dismissing them because they can be pigeonholed as skeptics is just a red herring. Reliable source is reliable. --Hob Gadling (talk) 15:20, 2 June 2021 (UTC)[reply]
I believe that we are facing a couple of orthogonal arguments that overlap in the previous posts, which is a good indication of the complexity of the issue. The first reaction I see is avoiding the direct opinion of a large number of scientists that ask for a thorough investigation and state that a leak is a viable option. This reputation of these 18 leading scientists is in my understanding a clear argument in that "there is no clear consensus on the origin of the virus by the scientific community".
The second point I find problematic is trying to give a false sense of "a majority of scientists" supporting the zoonotic nature. The correct statement would be that "initially there were more scientists supporting the zoonotic option compared to those opposing it", however, we are referring to a very small minority of voices compared to the whole spectrum of relevant scientists in the world (few dozens of supporters, fewer opposers, and the absolute majority undeclared). What is interesting to see that the recent trend is for more opposers to raise their questions, given that the arguments of the supporters do not clearly hold as more data coming out.
The third point is asking for "publications" in support of a lab leak. Such a line of reason is flawed because we cannot have a team of virologists drawing conclusions on a potential leak from a lab without access to the site, analyzing local samples, etc., which China is denying access to. Raising questions is the most that doubters can do in the absence of an investigation.
The last point is trying to frame opposers, or doubters, as "discredited" individuals, fools, or crazy conspiracists. The ironic point is that such non-scientific personal allegations are done by the side which fanatically believes to be the "holder of ethics and truth". It is clear that the nervousness arises because the long-believed zoonotic "truth" is being seriously questioned in the last two months, by all stakeholders, scientists, activists, politicians, supranational organizations, etc.
The bottom line is: There is no scientific consensus on the origin of the virus, and to date very little is known on the exact details of the spread of the virus. Wikipedia should reflect this and not fanatically support a zoonotic origin, which unlike in 2020, does not anymore convince the scientific community in 2021.

2003:C0:6F31:7E57:A506:11F9:ECEA:43E4 (talk) 14:34, 1 June 2021 (UTC)[reply]

"large number of scientists" - 18 is not a "large number"; and that statement would also be inconsistent with the lack of scientific papers which view the lab leak favourably. "The third point is asking for "publications" in support of a lab leak." - yes, exactly, see WP:V and WP:VNT (and avoid your personal WP:OR criticism). "There is no scientific consensus on the origin of the virus" - outright wrong; again, see the cited sources. RandomCanadian (talk / contribs) 14:39, 1 June 2021 (UTC)[reply]
Could you please share what is your personal threshold for the smallest number of top-scientists that qualify for your definition of a significant cohort? 2003:C0:6F31:7E57:745F:555:D36D:8B88 (talk) 17:57, 1 June 2021 (UTC)[reply]
The burden of proof is on you to show that there is a "significant amount" of scientists who disagree with the consensus statement. That can only be done by presenting verifiable, peer-reviewed papers which show that this is actually seriously disputed within the scientific community, not by making WP:SYNTH as to what is a significant number (especially not when some of the signatories of that letter don't even agree that a lab leak is likely, ex. Baric). As I've said, all of the sources I have found say that the scientific consensus is a natural, zoonotic origin, as with previous CoVs. If this were truly disputed, it should be trivial for you to find credible sources in quality journals which put forward a contrasting view. RandomCanadian (talk / contribs) 18:24, 1 June 2021 (UTC)[reply]
The 18 scientists among the most respected authorities in the field and the top institutions are in my understanding a "significant amount" of scientists. The letter co-signed by all of them states that "Theories of accidental release from a lab and zoonotic spillover both remain viable.". As a result, either we deduce that there is no consensus on the origin of the virus, as these scientists explicitly claim; or we have to accept they are an irrelevant part of the scientific community (despite being top professors and researchers at Harvard, Stanford, MIT, Yale, etc.). As they further iterate "We must take hypotheses about both natural and laboratory spillovers seriously until we have sufficient data.". I see two options i. you and/or other editors apparently are more informed and knowledgeable than these top scientists and have done a better screening of the related publications, or ii. that the related work does not conclusively support your stance. In any case, it is of paramount importance to highlight the fact that the community has not reached a consensus on the origin of the virus. Attempts to shortcut a conclusion at WP are really hard to comprehend. 2003:C0:6F31:7E57:A506:11F9:ECEA:43E4 (talk) 19:24, 1 June 2021 (UTC)[reply]
The alternative conclusions are that A) you are trying to take one (WP:PRIMARY) letter and use it to override all of the other sources on the topic; B) you are disregarding sources which don't fit with your narrative (for example, the documented reactions from some signatories saying that they believe a natural origin to still be the more likely hypothesis, and that their signing of the letter was more a call for further, more thorough investigations); C) you are not able to produce a WP:SECONDARY review paper which agrees with this assessment because it doesn't exist and D) you are full well aware of our policies against soapboxing, and you are doing it nonetheless. Since we, on Wikipedia, are biased, towards academic, peer reviewed litterature, and since you have failed to provide sources which disagree with the fact that a natural origin is still the scientific consensus, well then it is not possible to change the existing article text in that aspect. Again, it should be trivial, if they exist, for you to provide us a peer-reviewed review paper which makes clear that a lab leak is a serious hypothesis and not merely an "extremely unlikely but not ruled out yet" one. Failing that, you can go right back to other sites. RandomCanadian (talk / contribs) 19:33, 1 June 2021 (UTC)[reply]
Ignoring all your personal allegations and moving to the point: Does this letter express the stance of a relevant segment of the scientific community? If yes, then why twist the fact that the scientific community has not reached a consensus? I do not deny the existence of opposing views and publications on all sides (admittedly few more peer-reviewed on the zoonotic side). However, opposing views are at the core of any disputed theory with no consensus and no evidence to support any version. I do not comprehend why should we give you more publications (although I actually gave one above), only because you do not fancy considering the explicit stance of 18 top scientists in the field as relevant. A significant fraction of the scientific community is not accepting the consensus on the zoonotic version anymore in 2021, as these top scientists *explicitly* stated in the Science letter. Should we reason a consensus by our personal and amateur analyses of virology publications, or agree to use directly the explicit statements of a relevant part of the scientific community which explicitly deny that a consensus on the zoonotic origin is reached. 2003:C0:6F31:7E57:A506:11F9:ECEA:43E4 (talk) 19:50, 1 June 2021 (UTC)[reply]
Take a moment, and read all the previous comments, where the concerns about that letter (including it being a primary source, and so on so forth) are already addressed; and where reliable sources which explicitly state what the scientific consensus is are provided. I'm not going to reply further until your comments show evidence that you've actually done that, rather than being evidence that you're not listening. RandomCanadian (talk / contribs) 20:00, 1 June 2021 (UTC)[reply]
I have already read the above comments, but they do not directly target the point. You and other peers defended the zoonotic origin and cite papers supporting that stance. The existence of zoonotic supporters (scientists and editors) is not the dispute here. What we argue is whether there is only one view (zoonotic) that is shared by the overwhelming majority of the scientific community, or whether there are two, or more. The science letter is a direct primary source by a fraction of the community that categorizes more than one option as viable. It is direct support for the argument that the community (by its own explicit declaration) has not reached a consensus. As it is evident that a consensus has not been reached, I propose rephrasing the article from a one-sided "zoonotic fan-club" pitch, to a more balanced and accurate tone, e.g. "While many scientists believe a zoonotic origin is the most likely outcome, others have declared that both a lab leak and a zoonotic spillover are viable options."

2003:C0:6F31:7E13:6D15:D6AC:83A6:6D0D (talk) 20:51, 1 June 2021 (UTC)[reply]

Nobody is arguing that there are not two competing views. What is argued is that one of these views falls under WP:FRINGE (i.e., it is a view which significantly departs from the consensus of experts within the relevant field). See this for more details and how we need to handle this. In short: politics = fine, can be mentioned, due to notability; science = care taken to not unduly legitimise a small minority opinion. RandomCanadian (talk / contribs) 20:53, 1 June 2021 (UTC)[reply]
Our disagreement is then rooted in your characterization of 18 top scientists as promoters of WP:FRINGE, by "supporting a view that departs from the consensus of the experts in the relevant field". However, WP:FRINGE is not applicable as there is no consensus in the first place, from which to depart. As these scientists define the notion of "field experts" by virtue of their prestige and expertise, then by definition they cannot depart from themselves. 2003:C0:6F31:7E13:6D15:D6AC:83A6:6D0D (talk) 21:51, 1 June 2021 (UTC)[reply]
@2003:C0 For what it's worth, I'm also a scientific researcher at a R1 university in the US, and the talk among my friends and colleagues (professors, research scientists, post docs, in a variety of scientific fields; very smart left-leaning people with PhD's, though no virologists) is that the lab leak is plausible. Some think lab leak is more likely, and some think zoonotic is more likely (I'm in the zoonotic camp, but barely). Lab leak is simply not a fringe idea anymore. RandomCanadian, you would be well-served to just go any science department at the nearest university and ask around; I think you would be surprised at what you hear. We see a dichotomy: scientifically minded laypeople tend to dismiss the lab leak because it was outside the overton window until recently, but actual scientists with PhD's are open to the idea, because they know the messy and uncertain way that science and the academic system works. 24.18.126.43 (talk) 22:50, 1 June 2021 (UTC)[reply]
Then your friends propably also think it plausible that HIV, H1N1, the original SARS, Ebola virus were lab-leaked? It does not matter what your friends believe when they sit in their armchairs. It does not even matter what the people who actually look at the evidence and are actually competent to look at the evidence believe. Only the results of their investigations matter. The better the job they do, the less their beliefs will influence those results. --Hob Gadling (talk) 15:28, 2 June 2021 (UTC)[reply]
No, professors and research scientists that I know do not find it plausible that those other viruses are lab leaked. They do find it plausible that SARS-COV2 was lab leaked. 24.18.126.43 (talk) 01:13, 4 June 2021 (UTC)[reply]
When your friends are finished strutting and boasting their perfectly ordinary and boring academic accomplishments which make them par with a few Wikipedia editors (or maybe it is you who is doing the boasting for them), you can tell them that as soon as they do actual science which shows that the lab leak is plausible, publish it in an academic journal, and get it accepted as mainstream, Wikipedia can use their results. Until then, bye. --Hob Gadling (talk) 10:39, 4 June 2021 (UTC)[reply]
Hob, I know you are doing your best to combat misinformation. That is an admirable goal. There is a lot of misinformation surrounding covid19, and there are a lot of obnoxious anti-science people who latched onto the lab leak theory for the wrong reasons. But you're on the wrong side on this one; currently the scientific consensus is that lab leak is a plausible hypothesis (not certain, not most likely, simply plausible). Now I'm sure you have all sorts of wikipedia policies to counter whatever I say, perhaps by redefining "scientific consensus" in some wikipedia legal manner, or playing games about which sources count in wikipedia and which don't. I'm not equipped to argue with you about this; surely you know more about wikipedia than me and would easily win. But I've been honest with everything I've said here so far. I ask you to take a moment and honestly think about your position in light of all of the new information that has come out over the last several months. 24.18.126.43 (talk) 08:43, 5 June 2021 (UTC)[reply]
Except that's already what is in the article: the lab leak is possible, but deemed unlikely by scientists. I don't see what else needs to be changed. RandomCanadian (talk / contribs) 13:17, 5 June 2021 (UTC)[reply]
You mentioned "all sorts of wikipedia policies", but you do not seem to understand that they are there for very good reasons. A scientist's opinion is always based not only on scientific expertise, but also on personal political, religious, and ideological motives and on what the media choose to tell them. Your IP address shows that you are in the US. At the moment, the US media are permanently firing against China, using the lab leak idea as a weapon. (As an aside, I despise authoritarian governments like the Chinese one, but the reasoning used against them should be sound.) So, how can you know that the reason your friends think like that is purely scientific and not influenced by the peculiar US parochialities? Do you know what scientists in other countries think? Scientists' opinions are simply not reliable enough as sources for Wikipedia. Remember, they are something that needs to be filtered out by scientific methods! That is why Wikipedia demands secondary scientific sources instead of just people who are equipped with academic grades, but get the same media-preselected information as everybody else, answering "what is your take on this" questions.
There is a consensus about anthropogenic global warming. I guess you heard the number 97% at some time. That was one of several studies looking into the question. It was determined not by asking scientists what they think, but by looking at what scientific studies said. This is how scientific consensus is determined. Also, this article is called Investigations into the origin of COVID-19 and not Opinions on the origin of COVID-19.
We have good sources for "possible, but unlikely", but "plausible" is vague. Is something plausible if it is "possible, but unlikely"? Or does it need to be more than a distant possibility? You sounded as if you are using the second definition. The word "plausible" is not good enough to convey an exact meaning. So we will keep the "possible, but unlikely" wording, as RandomCanadian says. --Hob Gadling (talk) 05:50, 6 June 2021 (UTC)[reply]
(edit conflict)Your misunderstanding of that letter is still apparent. Supporting further investigations is not fringe. Using a letter, which some of the signatories said themselves is being used for misinformation by people promoting the lab leak, to argue that the lab leak is not "extremely unlikely", is misleading, AND fringe under the sense of the policy. As for your WP:OR of what constitutes consensus and what does not, it is irrelevant, since we do not allow original research. There are sources, from after that letter, given here, from reputable popular and scientific newspapers (Guardian, WaPo, Nature) which explicitly describe the current position as that of a consensus. That you think it isn't one, is, as I have said, irrelevant, since per WP:NPOV, only the opinions of sources matter. RandomCanadian (talk / contribs) 22:56, 1 June 2021 (UTC)[reply]
We have reliable sources backing that some influential scientists have found the WHO-China report's dismissal of the lab leak hypothesis difficult to accept and have become more willing to voice an undecided position on the origin of the virus. Such as this recent article by Carl Zimmer in New York Times. Terjen (talk) 23:15, 1 June 2021 (UTC)[reply]
That brings us back to WP:SCHOLARSHIP, WP:SCIRS (or MEDRS, nearly same thing) and the description given at WP:MEDFAQ ("Why can't I use articles from the popular press?" - replace medical with "scientific" or "biomedical" and the same concerns still apply). There is a tension between academic sources and the popular press. How we deal with that is a difficult question, but policy suggests we should give precedence to academic sources. RandomCanadian (talk / contribs) 23:23, 1 June 2021 (UTC)[reply]
In this case, it's not really a concern that readers may make incorrect medical decisions based on scientists' assessment of the origin of the virus. New York Times science journalist Carl Zimmer is well qualified to take the pulse on the scientific community. Terjen (talk) 23:53, 1 June 2021 (UTC)[reply]
MEDRS sources (in this case, review articles in high-quality journals) are what are needed to determine the scientific consensus. There's no reason to put popular press articles above MEDRS sources, particularly when the popular press is expressing views that are explicitly contradicted by the highest-quality MEDRS sources. -Thucydides411 (talk) 13:12, 2 June 2021 (UTC)[reply]
Please submit your strongest WP:MEDRS source that as required by WP:RS/AC directly says there is a scientific consensus. Terjen (talk) 20:15, 6 June 2021 (UTC)[reply]
There are many sources which say that explicitly. The strongest source among those already identified (I haven't found anything so far which contradicts this) would be the article in Nature by Maxmen et al. (a reputable scientific publisher). The alternative would be asking us to prove a negative (that there are no papers which dispute this). Alternatively, we can also make clearer the distinction between scientists and politicians (as reported here - interesting read). RandomCanadian (talk / contribs) 20:40, 6 June 2021 (UTC)[reply]
Hold on: The Maxmen article in Nature does not directly say there is a scientific consensus, as required by WP:RS/AC. It mentions consensus twice, but these refer to consensus in strategies for health management and consensus among powerful countries. For us to state there is a scientific consensus, it should be trivial to provide solid articles explicitly stating it. If not, we shouldn't be among the first to make the claim. Terjen (talk) 21:19, 6 June 2021 (UTC)[reply]
A sampling:
  • a few scientists believe that SARS-CoV-2 emerged through laboratory manipulations of SARS-CoV-like coronaviruses... Most researchers agree that bats or pangolins are the primary reservoirs of coronaviruses, but the transmission route of SARS-CoV-2 to humans from this primary reservoir is still under study [7]
  • All human CoVs have zoonotic origin and are capable of transmission among mammalian hosts; however, most CoVs originate in bats and are transmitted to humans through domestic animals (Forni et al., 2016; Su et al., 2016). Thus, bats are considered the natural host and primary reservoir of human CoVs (Cui et al., 2019). [8]
Worth noting, it appears that most sources simply leave the possibility of a lab origin unmentioned unless specifically countering such claims, suggesting such claims of majority perspective are accurate (as WP:RS/AC suggests). I'd be interested if a similarly strong source contradicting the claim that those favoring the lab hypothesis as likely (not merely 'viable' or 'possible') were a minority could be found. Bakkster Man (talk) 20:56, 6 June 2021 (UTC)[reply]
There is no mention of consensus in the samples. Per WP:RS/AC "any statement in Wikipedia that academic consensus exists on a topic must be sourced rather than being based on the opinion or assessment of editors." Terjen (talk) 21:28, 6 June 2021 (UTC)[reply]
If we interpret that to mean the source must say the word 'consensus' explicitly, then I'm not opposed to "most"/"few". Bakkster Man (talk) 21:53, 6 June 2021 (UTC)[reply]

Arbitrary break

reply to the preceding comment by Terjen
Conspiracy theories and speculations about the origins of SARS-CoV-2 are not quite as innocent as they might seem. In addition to fuelling existing political tensions and racist bigotry, the active promotion of the lab leak by some "aggressive proponents" has lead to the bullying of scientists (including the creation of attack pages, subsequently speedily deleted, here!) and to more difficulties in collaborations (already difficult) with Chinese ones... We ought not to give these people more credence than what they have in academic sources. The article by Zimmer, nevertheless, also makes clear (in it's header, at that) that while scientists support more thorough investigations (which kind of scientist would not?), they also still agree that "the so-called lab leak theory is unlikely". So, we have multiple sources, from a broad spectrum (newspapers to WP:PRIMARY letters to WP:SECONDARY reviews to in-depth investigations like that by the WHO) saying that scientists A) support investigations (the WHO report also supports this!) [not necessarily related to the lab leak, see for ex. [9]) but B) do not consider the lab leak to be likely. I don't know what more we need to make an accurate article which satisfies NPOV - scientists agree that the matter needs further investigation, but that a lab leak is not a likely scenario (hence, it is still fundamentally at odds with the prevailing view within the scientific community - as evidenced by the quotes from many scientists - so gets treated under WP:FRINGE (which is a broader definition than that of the regular meaning of the word "fringe")). RandomCanadian (talk / contribs) 00:41, 2 June 2021 (UTC)[reply]
The intention of WP:Fringe is to avoid that Wikipedia becomes the validating source for non-significant subjects or a forum for original research, which doesn't restrict us from representing other significant views than what some may consider the "prevailing" one. The Carl Zimmer article substantiates undecided as a significant viewpoint among scientists: "After long steering clear of the debate, some influential scientists have lately become more open to expressing uncertainties about the origins of the virus. If the two most vocal poles of the argument are natural spillover vs. laboratory leak, these new voices have added a third point of view: a resounding undecided." The article documents a range of views rather than a consensus, including quoting Yale immunologist Akiko Iwasaki stating "There’s so little evidence for either of these things, that it’s almost like a tossup." Terjen (talk) 01:49, 2 June 2021 (UTC)[reply]
You are proposing to ignore a perspective supported clearly by a significant segment of the scientific community by an explicit letter, and instead propagate a consensus stance, only because it serves a subjectively perceived social good. However, advocating anti-fringe for the sake of a social justice warrior's agenda is not in line with scientific rigors of truth above all. It is very evident and well supported that the community has no consensus on the origin of the virus. Automated dry replies of the form "No, that is not true.", ignoring the explicit content of a letter by 18 top scientists do not help this dicussion. Furthermore, you are misreading the letter at Science, which explicitly states that "We must take hypotheses about both natural and laboratory spillovers seriously until we have sufficient data.". On the contrary, you imply that the letter states a leak is extremely unlikely, which in my reading of the letter is incorrect.
2003:C0:6F31:7E13:9595:5CD6:5CFE:6A9C (talk) 11:52, 2 June 2021 (UTC)[reply]
You, on the other hand, look like exactly all of the other lab-leak SPAs, and you are also engaging in WP:OR by interpreting a WP:PRIMARY source (the letter). WP:PRIMARY explicitly says "Any interpretation of primary source material requires a reliable secondary source for that interpretation.". We prefer WP:SECONDARY sources, and these say that 1) the scientific consensus is still "natural origin" - sources already provided above - and 2) that the letter is being misused by aggressive proponents of the lab leak (such as you and your Twitter friends) - quote: "Nonetheless, some aggressive proponents of the lab-leak hypothesis interpreted the letter as supporting their ideas.". In addition, many note that all of this diplomatic finger-pointing is needless distraction from the actual problem, which is dealing with the virus right here right now (where it came from is actually a purely "academic" debate now - it won't help with fighting it), preventing future zoonotic viral outbreaks (these happen all the time. Recent example: Influenza A virus subtype H10N3), and improving biosecurity rules - all measures which require collaboration. Reliably sourced statements from high-quality secondary sources, and not selective context-less reading of primary sources, is what is required. Until you've demonstrated a willingness to look for better sources and stop engaging in WP:OR, I'm not going to feed into your feedback loop (nor tolerate your ad hominems - calling my a "social justice warrior" implies a lot more things about you than you might think). RandomCanadian (talk / contribs) 12:34, 2 June 2021 (UTC)[reply]
I never supported the lab leak theory in any of my statements or comments (although supporting it is as honorable as opposing it IMHO, as long as it serves the truth), I just insisted that scientists believe it to be a viable hypothesis. However, your expressed opposition to one side of the argument makes you biased and unqualified to treat this topic impartially. I find the remaining personal insults unworthy of any further consideration.
Instead, I have the right to demand (sadly not from you anymore) that the truth about the scientific community's lack of consensus be reflected in this article. The sources on the divide of the scientific opinions are crystal clear. Demanding more sources is pure idiocy and POV. By definition, there can be no consensus after the publicly expressed disagreements of the most respected experts in the field. We cannot re-interpret the meaning of consensus to fit our POV. Please accept it and save our precious time. 2003:C0:6F31:7E13:E5AE:EE25:F808:60 (talk) 14:00, 2 June 2021 (UTC)[reply]
By definition, there can be no consensus after the publicly expressed disagreements of the most respected experts in the field. We cannot re-interpret the meaning of consensus to fit our POV. Which viewpoint do you believe is being disagreed with by the letter, and where in the letter was it expressed? The value and necessity of meaningful investigation, the likelihood of the multiple unconfirmed possibilities, or both? On a related note, have you considered creating an account? Bakkster Man (talk) 16:10, 2 June 2021 (UTC)[reply]
To clarify my point: There is no consensus in ruling out a lab leak as a fringe theory, or as an extremely unlikely hypothesis that is discredited by scientists. For a segment of the scientific community, it is a viable hypothesis that deserves serious consideration and consequently further investigation. In contrast, the current article version in a bold manner gives the impression of the leak as a discredited fringe theory with no support in terms of its viability from serious scientists.
The letter is not very long (4 paragraphs) and can be read in the blink of an eye [1]
P.s.: I deleted an account years ago when WP started to be time-consuming :( This intervention broke my self-oath of not interfering, to the bad luck of RandomCanadian ;) 2003:C0:6F31:7E13:E5AE:EE25:F808:60 (talk) 18:12, 2 June 2021 (UTC)[reply]
Well, then please create a new one, it is simple and it helps communication and warnings to be issued. Forich (talk) 22:57, 3 June 2021 (UTC)[reply]
To clarify, when I'm referring to the lab leak being 'fringe', I'm referring to WP:FRINGE/ALT. This doesn't mean it's ruled out, only that it's adherents are a minority. And when I say adherents, I mean those who believe the lab origin is not merely possible, but likely. And not even all the signers of the Science letter even fit that definition of an 'adherent', as Ralph Baric signed specifically regarding the thoroughness of investigation: Baric had also signed Relman’s letter in Science, but he told me that his concerns had been with the W.H.O.’s failure to conduct a thorough, transparent review of biosafety measures at the Wuhan Institute of Virology. “I really believe that the genetic sequence for sars-CoV-2 really points to a natural-origin event from wildlife,” he said.[10]
Of course, that distinction is difficult to get right and make clear. I do think the article is better now than it was a few months ago, but that doesn't mean there isn't still room for improvement. But the first question is, do we agree that belief that the lab leak origin is a likely origin is a minority opinion among scientists? Bakkster Man (talk) 19:02, 2 June 2021 (UTC)[reply]
That the lab leak origin is a viable and serious hypothesis is an explicit stance by a "segment" of the scientific community. Whether this "segment" represents the majority, or the minority of "opinions" is for me hard to assess. In particular, as a serious on-site investigation has not been conducted, the lack of empirical evidence in support of the original zoonotic hypothesis (e.g. the failure of finding any intermediate host carrying the exact SARS-COV-2 genetic information despite tens of thousands of sampled animals, etc.) is making the number of doubters increase on a daily basis. My very personal assessment is that while in 2020 most scientists assumed the virus has a natural origin, in 2021 a critical mass of scientists apparently has doubts. 2003:C0:6F31:7E13:E5AE:EE25:F808:60 (talk) 19:56, 2 June 2021 (UTC)[reply]
We agree on "viable and serious", so all we disagree on is whether the article as written current does that. If you compare to the start of the year, I'd argue we do a much better job of that (in part because, at the time, it wasn't agreed that an accidental lab leak was "viable and serious"). So now it's the tough job of assessing the sources to verify what we're writing is credible. Like you said, while it's hard to assess prevalence, most credible sources say the opinion that natural origin is more likely is the majority. If that changes, then we will change (like when the WHO published their report giving "viable and serious" investigation into an accidental lab leak).
I'd like to propose an alternate explanation of the change we're seeing publicly in statements. It may not be an increase in 'doubters' of a natural origin, and instead because there's no longer an implied connection to the loudest, most conspiratorial voices in the room (ie. Trump) that had a chilling effect last year. The NYT found some who felt that way: Some scientists attributed the shift in part to the fact that the more extreme proponents of a lab leak hypothesis, like Mr. Navarro, had drowned out the more measured discussions of how lab workers could have accidentally carried the virus outside. And like anything, we need to be able to source it reliably. So the same as I wouldn't ascribe that motivation to all the people speaking out, we also can't ascribe it to failure to find the animal source. Not without a source. Hope that helps clarify things, and let me know if you have any specific items you think could be improved (supported by sources). Bakkster Man (talk) 20:29, 2 June 2021 (UTC)[reply]
We don't "interpret" consensus. We "report" what reliable, secondary sources say and what they say about consensus. Recent scientific papers and newspapers, as cited multiple times above, note that the scientific consensus is still a zoonotic origin. Hence we report that, per WP:NPOV and WP:NOR, while leaving a minor mention of alternative scenarios, per WP:FRINGE and WP:DUE. End of. The only arguing that should be there is about the credibility of sources and how to accurately represent the subject based on the credible sources. Everything else is a waste of everyone's time. RandomCanadian (talk / contribs) 18:45, 2 June 2021 (UTC)[reply]
On a lighter note, RandomCanadian sounds like he would watch the first chapters of the Lost TV series and conclude with a serious face that there is consensus on why those people are in the island.  :) On a serious note, we are witnessing an interesting case in which the scientific sources overstate the confidence of their results and the news sources do the contrary. It is a rare turning of events because normally scientists will say "taking cofee is correlated to health metrics in this tiny sample of people" and news sources will say "Scientists find that consuming cofee extends life". Forich (talk) 21:55, 2 June 2021 (UTC)[reply]
watch the first chapters of the Lost TV series and conclude with a serious face that there is consensus on why those people are in the island. Not necessarily problematic, so long as it's reliably sourced and we update if/when the majority opinion changes. Exactly what WP:FRINGE/ALT says, btw: should still be put into context with respect to the mainstream perspective. ;)
Maybe reframing things away from 'scientific consensus' to 'mainstream perspective' will be more palatable, at least for some. Bakkster Man (talk) 22:26, 2 June 2021 (UTC)[reply]
WP:RS/AC is very clear on this: "A statement that all or most scientists or scholars hold a certain view requires reliable sourcing that directly says that all or most scientists or scholars hold that view." Editors' determination that the majority opinion is X, in the absence of sources directly saying "the majority opinion is X", constitutes WP:OR. Stonkaments (talk) 02:50, 3 June 2021 (UTC)[reply]
the scientific sources overstate the confidence of their results and the news sources do the contrary By using the word "overstate", you are saying that your own opinion is in between. Put more neutrally and taking you out of the picture: the scientific sources are more confident about the zoonotic origin than the news sources. Wikipedia editors can think what they want, but Wikipedia articles take the position of the more reliable sources. They do not reflect the position of the editors who happen to write the article. --Hob Gadling (talk) 07:47, 3 June 2021 (UTC)[reply]
What is the strongest WP:RS directly substantiating the claim of scientific consensus per WP:RS/AC? Terjen (talk) 04:05, 3 June 2021 (UTC)[reply]
This states it directly, as quoted above. There are then reliable newspapers which echo this. If I look through enough academic papers I might find some which make this statement too (but that's a time consuming exercise), but many of them simply don't mention anything but a natural origin scenario so this makes me think of the scenario at WP:FRINGELEVEL where "Fringe theories may be excluded from articles about scientific topics when the scientific community has ignored the ideas." and also WP:FALSEBALANCE ("plausible but currently unaccepted theories should not be legitimized through comparison to accepted academic scholarship"). RandomCanadian (talk / contribs) 04:35, 3 June 2021 (UTC)[reply]
The provided source is from June 2020, while the letter of the 18 renowned scientists, stating that the leak is a viable and serious hypothesis, was released on May 2021. How can a one-year old publication be used as a proof of consensus, while there exist an explicit consensus-disrupting declaration that is less than 1 month old? 2003:C0:6F22:6318:4DC0:7EF:B535:FEB6 (talk) 11:41, 3 June 2021 (UTC)[reply]
Could we look at removing the term "conspiracy theory" from this article? Saying this implies that some avenues of investigation are inappropriate. Valid hypotheses should treated with more respect. 2601:844:4000:F910:E8E4:1C40:DCB:D45A (talk) 12:37, 3 June 2021 (UTC)[reply]
You've been given sources, recent ones at that (in addition to scientific papers), which explicitly state what the scientific consensus is, and some which also explicitly state that some theories, such as the claims the virus is man-made, are conspiracy theories. You are not allowed to interpret primary sources to claim that there is no such thing, per WP:NOR and WP:PRIMARY. The only references to "conspiracy theory" I see in this article are:
  1. "A number of conspiracy theories have also been promoted about the origins of the virus.[17][20][21]"
  2. "Nonetheless, in the context of global geopolitical tensions,[46] the origin is still hotly debated,[47] and, early in the pandemic, conspiracy theories spread on social media claiming that the virus was bio-engineered by China,[48] amplified by echo chambers in the American far-right.[49] Other conspiracy theories promoted misinformation that the virus is not communicable or was created to profit from new vaccines.[50]"
Both of these seem correct. RandomCanadian (talk / contribs) 14:08, 3 June 2021 (UTC)[reply]
The consensus claimed by a paper in 2020 does not imply that there is still a consensus in 2021, by pretending that nothing has changed in the scientific opinion between 2020 and 2021. The correct formulation would be that "Until June 2020, existing sources indicated a consensus on the zoonotic origin of the virus among the scientific community. In contrast, recent declarations in 2021 by leading field scientists consider a lab leak to be a viable and serious hypothesis." 2003:C0:6F22:6318:8D4D:4AEF:DE89:7EC3 (talk) 14:38, 3 June 2021 (UTC)[reply]
The page does not refer to the possibility of an inadvertent lab leak as a conspiracy. I've cleaned up the one paragraph from 'bio-engineering' to 'bio weapon' specifically to ensure that this is accurately reflected and can't be confused. The conspiracy theories the article refers to (Winnipeg Lab source, biological weapon, non-communicable, designed to sell vaccines) are not the "viable and serious hypothesis" you're referring to. Bakkster Man (talk) 14:42, 3 June 2021 (UTC)[reply]
The paper titled "COVID-19 breakthroughs: separating fact from fiction" published 5 June 2020 in the FEBS Journal was proclaimed offered by RandomCanadian in response to a request for the strongest WP:RS directly substantiating the claim of scientific consensus. It explicitly states "the scientific consensus on the origin is SARS-CoV-2 is that, like other coronaviruses, it evolved naturally and was transferred to humans via an animal" but also that the virus emerged from a laboratory environment "cannot be ruled out entirely." Unfortunately, reviewing research related to the origin of the virus is not a primary focus of the paper, but limited to a single section and only a few sources. Instead, the paper discusses a range of topics such as using Ibuprofen to manage symptoms, the protective role of nicotine, whether SARS-CoV-2 linger on surfaces, the effect on ethnic minorities, impact on children, and variation in mortality rate. Is this paper really the best we have to substantiate a scientific consensus? Terjen (talk) 22:12, 3 June 2021 (UTC)[reply]
@Terjen: I never said it was the strongest, I said it was one source among many, and I've also given many recent newspapers which confirm this. Quote-mining scientific papers isn't my forte, and it's a time consuming process. However, in the absence of sources which explicitly dispute the presence of a consensus, we're stuck with those which do say there is one, personal interpretations of primary sources to the contrary notwithstanding. RandomCanadian (talk / contribs) 22:21, 3 June 2021 (UTC)[reply]
You responded with this paper upon my request for the strongest WP:RS. If there is a consensus among scientists, it should be trivial to substantiate it. Terjen (talk) 22:33, 3 June 2021 (UTC)[reply]
Re "in the absence of sources which explicitly dispute the presence of a consensus, we're stuck with those which do say there is one." No, if we only have weak sources suggesting there is a consensus, we're free to ignore them and avoid making claims about a consensus. Terjen (talk) 22:38, 3 June 2021 (UTC)[reply]
I wouldn't call the Guardian, NYT, or Nature or scientific journals, "weak sources". WP:FRINGELEVEL says that if scientific sources ignore an hypothesis, it's likely that it isn't the prevalent one. This, very recent paper, in Lancet Resp Med, has "The most plausible origin of SARS-CoV-2 is natural selection of the virus in an animal host followed by zoonotic transfer." This is entirely consistent with the lab leak being a fringe theory, as per the sources (in the post just below) which explicitly say that there is a scientific consensus. If you disagree, start a bloody RfC so we can get stop talking past each other. RandomCanadian (talk / contribs) 23:09, 3 June 2021 (UTC)[reply]
My primary concern is not the lab-leak hypothesis, but that we shouldn't present the origin question as settled science. However, regarding WP:FRINGELEVEL saying that if scientific sources ignore a hypothesis it may be excluded, even the article you offered upon my request for the strongest WP:RS doesn't ignore the lab-leak hypothesis, but states that it "cannot be ruled out entirely." Terjen (talk) 00:20, 4 June 2021 (UTC)[reply]
Ok, final reply about the IP's OR definition of "consensus". Free to look at these, recent sources, which say it explicitly:
There are others, recent and older, which show that despite the politics this hasn't changed at all in the scientific community. In any case, consider this a final warning about engaging in WP:OR. RandomCanadian (talk / contribs) 15:51, 3 June 2021 (UTC)[reply]
Empty sentimental threats in the absence of arguments, cannot stop anyone from asking the truth to be written impartially. As I repeated multiple times, there is no ultimate consensus on the origin of the virus among the scientific community, because the finest members of the research community (18 elite-most scientists from Harvard, MIT, Stanford, Yale, etc.) have recently openly declared (see cited Science letter) that both a leak and a zoonotic spillover are viable hypotheses. Citing outdated publications from 2020, or random collections of opinion articles at newspapers as a proxy of an alleged consensus, cannot overrule the explicit declaration of scientists themselves. Imagining a consensus of a scientific community, against the explicit declaration of the most important elitary segment of this very same community makes no sense. 2003:C0:6F22:6318:8D4D:4AEF:DE89:7EC3 (talk) 16:17, 3 June 2021 (UTC)[reply]
I'm hesitant to join this rather spirited discussion -- but I must say that you seem to be reading what you want to read in that Science letter (which offers opinion only, no evidence). In actual published data, scientists have been saying the same thing all along -- that all evidence to date indicates that SARS-CoV-2 was not purposefully manipulated, and the notion that the pandemic resulted from a laboratory accident is not necessary to explain the pandemic. The media, on the other hand, have followed the opinion pendulum back and forth, from logic to fringe and back again. DoctorJoeE review transgressions/talk to me! 16:39, 3 June 2021 (UTC)[reply]
Thanks for your comment DoctorJoeE and sorry for having to witness emotionally loaded comments. I agree with you that a significant segment of the scientific community has actually expressed opinions, or published articles in favor of a zoonotic origin of the virus. What we disagree is on whether there is a full consensus by the community that the zoonotic origin as the only viable hypothesis, as the article portraits. The letter I cited explicitly state that both hypotheses, zoonotic or lab leak, are viable hypotheses that should be taken seriously and investigated. As a result, the question is whether this explicit declaration of an important segment of the research community, make the consensus argument still hold (i.e. can a community have a consensus if its most notable members publicly disagree)? Why is this important at all: because if a scientific consensus on a zoonotic origin does not exist and the lab leak is now considered as a viable hypothesis (hypothesis means an open option, as long as we know more), it should not be treated at this article as a fringe and discredited theory with links to conspiracy. 2003:C0:6F22:6318:8D4D:4AEF:DE89:7EC3 (talk) 18:04, 3 June 2021 (UTC)[reply]
whether there is a full consensus by the community that the zoonotic origin as the only viable hypothesis, as the article portraits Why should anyone take you seriously when you can't even bother to correctly reproduce what the article is saying? It does not say, and did not when you wrote the above, that the lab leak idea is "not viable", it says it is "extremely unlikely". When something is not viable, it cannot be extremely unlikely at the same time, only impossible. --Hob Gadling (talk) 11:32, 4 June 2021 (UTC)[reply]
Are we referring to the same letter[2]. Citing "Theories of accidental release from a lab and zoonotic spillover both remain viable." and "We must take hypotheses about both natural and laboratory spillovers seriously until we have sufficient data.". You are misreading the letter, in the section you refer to the authors criticize the WHO report that deduced a leak as "extremely unlikely" without a thorough consideration. I think you owe me an apology for jumping into aggressive language, instead of investing 60 more seconds to read the letter. 2003:C0:6F1E:B606:A481:48C2:80CC:AF51 (talk) 14:39, 4 June 2021 (UTC)[reply]
I guess you are talking to me and not to the other IP, and I guess you are the same person as the other IP. Therefore I added one more colon to your indentation to make that clearer.
I was not talking about any letter, I was talking about "the article". By which I mean the Wikipedia article Investigations into the origin of COVID-19, the Talk page of which we are on. You could have inferred this from the fact that I said "the article" and not "the letter". You had written whether there is a full consensus by the community that the zoonotic origin as the only viable hypothesis, as the article portraits. So, you claimed that the Wikipedia article Investigations into the origin of COVID-19 said that the zoonotic origin is the only viable hypothesis, didn't you? I explained to you that it does not, and you can check if by clicking on the link Investigations into the origin of COVID-19 and searching for the word "viable". Now you are talking about some "letter" I was supposed to have been talking about. Well, I wasn't. In case you still have not got it, I was talking about the Wikipedia article Investigations into the origin of COVID-19. --Hob Gadling (talk) 14:55, 4 June 2021 (UTC)[reply]
I implied the Science article, i.e. the letter, assuming that the context was derivable from the previous thread exchanges but sorry about the confusion in case you read only my latest comment in isolation. In that case, unless you have any point against my summarization of the letter, then I believe your concern is addressed. 2003:C0:6F1E:B606:A481:48C2:80CC:AF51 (talk) 17:30, 4 June 2021 (UTC)[reply]
Still does not make any sense. Is there anybody who says "there is a full consensus by the community that the zoonotic origin as the only viable hypothesis"? The letter doesn't, the Wikipedia article doesn't. None of the editors here does. But you claim that there is disagreement about this question. Where do you get that? The lab leak has always been considered viable, but extremely unlikely, by the consensus. That is still the case. --Hob Gadling (talk) 20:38, 4 June 2021 (UTC)[reply]
See this ANI thread for further action. @DoctorJoeE: Your sum-up seems about almost an indirect quote of thie first paper I list here, "Other strategies, more speculative than those listed above, have been used to suggest that SARS-CoV-2 came from a laboratory accident at the Wuhan Institute of Virology (Rogin, 2020). The evidence indicates that SARS-CoV-2 was not purposefully manipulated (Andersen et al., 2020). Moreover, the notion that the SARS-CoV-2 pandemic resulted from a laboratory accident at the Wuhan Institute of Virology (Rogin, 2020) is not necessary to explain the pandemic."... RandomCanadian (talk / contribs) 16:43, 3 June 2021 (UTC)[reply]
Hello; I've been lurking here for a while and find the discussion on consensus interesting, so I decided to create an account. I wanted to note that there have been two very recent articles that explicitly address this, (both from today). As a quote from a prominent scientist: '“We can’t even begin to talk about a consensus other than a consensus that we don’t know,” said David Relman, a Stanford University microbiologist. “We have nothing like the amount of data we need.”' https://www.washingtonpost.com/world/asia_pacific/coronavirus-bats-china-wuhan/2021/06/02/772ef984-beb2-11eb-922a-c40c9774bc48_story.html And as a take-away 'The scientific consensus had been smashed to smithereens.' https://www.vanityfair.com/news/2021/06/the-lab-leak-theory-inside-the-fight-to-uncover-covid-19s-origins Sorry about the formatting. Chvko (talk) 18:26, 3 June 2021 (UTC)[reply]
Welcome, Chvko! The two relevant quotes (as I see them) from those two articles are as follows:
WaPo: Many scientists say the most likely path is that the virus spread in nature and jumped from animals to humans. But that belief is largely based on how other coronaviruses have originated, not what is known about this case.
VF: There are reasons to doubt the lab-leak hypothesis. There is a long, well-documented history of natural spillovers leading to outbreaks, even when the initial and intermediate host animals have remained a mystery for months and years, and some expert virologists say the supposed oddities of the SARS-CoV-2 sequence have been found in nature.
These aren't the only sources making such evaluations, of course, but it helps to include them here for ease of discussion. Bakkster Man (talk) 18:46, 3 June 2021 (UTC)[reply]
I believe the most relevant quotes are the ones that Chvko highlighted (welcome!). That is two more solid sources disputing the existence of any scientific consensus at present. The Vanity Fair article also provides additional context for how problematic the notion of scientific consensus has become in this politicized debate: In April 2021, in an editorial in the journal Infectious Diseases & Immunity, Shi resorted to a familiar tactic to contain the cloud of suspicion enveloping her: She invoked scientific consensus, just as the Lancet statement had. Stonkaments (talk) 02:04, 4 June 2021 (UTC)[reply]

A big source of confusion is that the word "origin" is an umbrella term. If we break down its components, one can arrange them in order of how fast evidence comes up regarding it, after an epidemic. This is more or less the order:

  1. The causative agent is discovered
  2. The index case is epidemiologically traced
  3. A likely reservoir is discovered by genomic analysis
  4. A likely evolutionary history is reconstructed from molecular genetic analyses
  5. The intermediate host is discovered
  6. The actual animal that hosts the inmediate virus ancestor of the virus is found in the wild

The word consensus can be safely applied to parts 1-3 above. Lots of uncertainty remain for part 4. Parts 5 and 6 are total mysteries, still. But this is normal in most epidemics. What word best summarizes the whole origin? I do not know. Forich (talk) 20:01, 3 June 2021 (UTC)[reply]

In addition, the content of the article is confusing because the title refers to the "origin of COVID-19" and the first sentence states the "origin of SARS-CoV-2", which in my understanding are orthogonal concepts: the former questions "how was the first human infected?" and the second "how did the virus evolve?". If such orthogonal questions are raised, even opposing hypotheses can funnily co-exist, e.g. the origin of SARS-CoV-2 can be a natural evolution, while the origin of COVID-19 can be a lab leak from that natural virus? This highlights the need for editing the article from multiple angles. 2003:C0:6F1E:B606:3D8B:135E:DBC:48EA (talk) 21:24, 3 June 2021 (UTC)[reply]
@Forich: 2. The index case is epidemiologically traced Is it actually the case that there is consensus on this? I was under the impression that one of the major reasons why we don't have a clear resolution to resolve the lab question is the lack of a definitive index case. From the article: The earliest human cases of SARS-CoV-2 were identified in Wuhan, but the index case remains unknown. This doesn't mean particular details can't be evaluated for likelihood or ruled out, but I think it's worthwhile to confirm that there is not yet an index case identified. Bakkster Man (talk) 21:34, 3 June 2021 (UTC)[reply]
As far as I can see, 1. is obvious; 2 is not solved yet and likely won't be for a while; there is a rather clear consensus for 3 (likely reservoir = bats); I'm seeing papers about 4 ([11][12][13], so I guess that is also pretty much consensus. So that leaves 5-6. 6 took 14 years for SARS-CoV... Anyway, my two cents is that there will likely be some more time before we get a definitive answer on this, so likely we'll be dealing with disruption related to this, for a while... RandomCanadian (talk / contribs) 21:46, 3 June 2021 (UTC)[reply]
Agree with RandomCanadian, but since the pangolin evidence was found to have holes I would be cautious in calling it consensus. This is my best effort to summarize part 4: According to the WHO report, one of these reconstructed steps was that RaTG13 was found to have 96.2% genetic similarity with SARS-CoV-2. However, they qualify that by saying "Although SARS-CoV-2 is closely related to RaTG13, only one of the six critical amino acids sites [in the RBD of the S protein] is identical between the two viruses. A second step was that pangolin viruses were found to have some of the parts needed to complete the evolution, but the WHO summarizes the results from this line as inconclusive by saying "Although some researchers thought these observations [similar amino acids to the RBDs of pangolins] served as evidence that SARS-CoV-2 may have originated in the recombination of a virus similar to pangolin-CoV with one similar to RaTG13, others argued that the identical functional sites in SARS-CoV-2 and pangolin-CoV-GDC may actually result from coincidental convergent evolution". Andersen summarized the advances on the reconstruction of the evolutionary history of SARS-CoV-2, in this tweet: "The 'natural' version of this actually has a lot of evidence to it by now - we continue to see more and more of the pieces that make up the puzzle of SARS-CoV-2's evolutionary origin. The problem is - it's a big puzzle.". If the puzzle is big and the main reconstructed steps have not been conclusive determined, we should be cautios to say that a lot of progress has been made on this front, in my opinion.. Forich (talk) 22:23, 3 June 2021 (UTC)[reply]
@Bakkster Man:, good point. I used index case as the first identified patient, which is well-known who he is (dec 8 case according to WHO, or Dec 1 according to primary sources). As far as we know, he is the most likely candidate to have been infected by the animal source. On your point I've seen molecular clock studies that use a "root" case, which is previous than the index case. That would be what you are thinking, in case of a single introduction point, and tracing the clock of the variability observed in december, it is hypothetized that the index case from Dec 8 does not coincide with the root case, which probably happened late November 2019 or a few days earlier. That root would still be unknown, and therefore you are absolutely right. Forich (talk) 22:29, 3 June 2021 (UTC)[reply]
@Forich: You're right, index case just means first identified in a given population. That could be the first human ever, or just the first for a given localized cluster. But I think we agree, in this case we're talking about the global 'root' case, not just the currently identified Wuhan index case. Bakkster Man (talk) 22:47, 3 June 2021 (UTC)[reply]

Arbitrary break 2

I see we are currently having edit wars over the use of the word consensus. Please read a related discussion on [[14]] for further insights. My proposal is to agree that:

  1. There is consensus on these aspects of the umbrella term "origin": i) The causative agent of COVID-19; ii) The Wuhan index case; iii) The likely reservoir suggested by genomic analysis
  2. There is not consensus on these aspects: iv) The likely evolutionary history suggested by reconstructions from molecular genetic analyses; v) The intermediate host; vi) The animal that acts as reservoir to hosts the inmediate virus ancestor actually caught in the wild by zoologists.

Pinging the editors involved with a call to calm down the war: @Shibbolethink:, @Adoring nanny:, @CutePeach:

Aspects v) and vi) from the list above should not be realisticly expected to have a consensus soon. So we should be aware that having uncertainty on them doesn't undermine the possibility of having an overall consensus on the umbrella term "origin". Forich (talk) 16:39, 19 June 2021 (UTC)[reply]

Yes I'm very interested in using BRD in this, and not edit warring. That's why we have ongoing discussions about this on this very talk page! But I think your point 2 is a non-sequitur. We don't need all virologists to agree on those things to say "the consensus among virologists is that a zoonotic origin is more likely." We just need sources showing a consensus is that the zoonosis is more likely. And we have that, as shown here and elsewhere.--Shibbolethink ( ) 16:43, 19 June 2021 (UTC)[reply]
So, to be very specific about the wording to use in relation to the evolutionary history suggested by reconstructions from molecular genetic analyses, please bring the most reliable sources (MEDRS and Primary research only, no news sources) that summarize our current state of understanding. Let's keep it short and use at most three (3) sources. Forich (talk) 16:42, 19 June 2021 (UTC)[reply]
I also disagree with your point 1 section ii -- We do not have consensus in the scientific community about that index case. That is just the earliest case we have. No reason to believe the virus actually emerged in Wuhan at this point, or that this man in November was the first infected. Could have been Hubei province. Could have been Yunan. And our molecular clock analyses show that it could have been mid-October. As I go into extreme depth about in your linked thread! And as I recently added to WP:LABLEAK.--Shibbolethink ( ) 16:47, 19 June 2021 (UTC)[reply]
Yo do realize that your observation that there is no consensus on the index case goes against your proposal to state that "there is consensus on origin"? I am confused on why you bring this, but I appreaciate your honesty in being objective. Forich (talk) 22:10, 19 June 2021 (UTC)[reply]
@Shibbolethink: I stand by my point 2, which really boils down to lacking consensus on the likely molecular history from ancestor to SARS-CoV-2. The other aspects of finding the animals in the wild should not be of concern to reach the word consensus. Your point that scientists use words that suggests consensus, and using them near the word "origin" lacks context. In some of those papers, they use origin to refer to the disease, in other to the pandemic, in others to the animal source, in others to the place of the initial outbreak, etc. I am sure I can pick apart any mention you bring of the word origin in top sources, to its contextual specific meaning. If we are going to use it loosely, as in the lead, I stand that having a precise summary of the molecular studies of the evolutionary history is the missing piece of the puzzle that can tilt our language to consensus. If we can not prove that that literature has settled on a likely origin, I strongly oppose that we say "there is consensus on origin". Forich (talk) 16:59, 19 June 2021 (UTC)[reply]
Do you have any specific policy or source-based points to argue against the very well-written and extensively researched WP:NOLABLEAK? Or the many similar arguments made on this page? We are approaching WP:SATISFY territory with the amount of times this has been brought up without any new actual points or evidence. Because even after my own pre-wiki assessment of the landscape of scientific writing, reading that essay is what lead me to believe the "wikipedia-relevant" policy-interpretation would be that the MEDRS consensus is "zoonosis is more likely" even though the accidental lab leak is "possible." And so we must follow WP:RSUW and talk about the "zoonosis is more likely" a lot and the "lab leak is possible" a little. Which is what we do, I'm happy about the state of this article because of that. It's proportional WP:DUE weight.--Shibbolethink ( ) 17:06, 19 June 2021 (UTC)[reply]
@Shibbolethink:, you say We do not have consensus in the scientific community about that index case. Be aware that index case, by defintion, is whatever person we know to have been infected first, a fact that is always certain. You seem to refer to the root of the initial outbreak, the person that according to the molecular clocks, should be the real index case. We agree that we have no consensus on the root of the initial outbreak. Can you elaborate on why lacking consensus about it can be bothersome for the overall understanding of the origin? My honest take on it is that it is unimportant whether the index case is the Dec 8 case from the WHO report, or someone else two approximately three weeks before that. The real root case, if it is not too far away (in time and place) from the index case can be dismissed as small nuisance, IMHO. Forich (talk) 17:09, 19 June 2021 (UTC)[reply]
I think you may be confused about what I'm saying in that comment. That december 8 person is not even the earliest infection recorded anymore, although he may still be the earliest "confirmed" infection, I haven't checked in a few days. We want to avoid a Gaetan Dugas situation, most of all, prematurely calling someone an index case in the absence of more evidence. Here's what I'm concerned you may be doing (tell me if I'm wrong). It appears as though the argument you're forming is that since there are elements of the origin that have no consensus at this point (index, location, etc), that means that we cannot have a consensus about the zoonosis being the most likely scenario. But this is not a fair analysis. E.g. one can be reasonably sure that a large outbreak of food poisoning came from the Golden Corral on the corner of Main st. and Washington ave. without knowing whether it was the egg salad or the coleslaw to blame. This ambiguity and issue is why following WP:MEDRS is key here. We follow what the sources tell us, not our own original research. It's not our place to start playing epidemiologist here. Tell me if I'm misreading. --Shibbolethink ( ) 17:19, 19 June 2021 (UTC)[reply]
Also, just wanted to say, the SARS-1 zoonosis event occurred very far away from the city where most early infections occurred At least 1,200 kilometers away, I believe quite a bit more. Similar travel between rural and urban settings occurred with several Ebola outbreaks and MERS outbreaks. See the sections in WP:NOLABLEAK marked "Wuhan was likely not the origin" and "Viruses typically cross over rurally, then are first detected in cities". SO it is still very viable that the actual "patient zero" was infected pretty far geographically from Wuhan.--Shibbolethink ( ) 17:24, 19 June 2021 (UTC)[reply]
This is a second commentary that, if true, would constitute push back against the "there is consensus" on the origin, which I thought you were supporting. I am confused, but thanks for being careful to add comments from all sides, even if they counter your own point Forich (talk) 22:20, 19 June 2021 (UTC)[reply]
To clarify the point on context. Suppose a paper that has H0: zoonotic origin and Ha: human origin in the context of having diseases emerging from animals, versus being circulating in the species without being recognized (as occurred with hepatitis C). If it says "zoonotic origin is more likely" it has a specific meaning in relation to Ha. Now suppose a second paper has Ha: 100% synthetic virus. The same words "zoonotic origin is more likely" has different connotations. A third paper can be about the animal source of the initial outbreak in Wuhan, and it can have: H0: zoonotic animal source, vs Ha: the source was another human that brought the disease to the market. The same words "zoonotic origin is more likely" mean different things in this third paper.Forich (talk) 17:25, 19 June 2021 (UTC)[reply]
And do you have any evidence that this is what has occurred over at WP:NOLABLEAK? From my re-read just now, I believe the context in those sources is appropriate for how they're being used.--Shibbolethink ( ) 17:31, 19 June 2021 (UTC)[reply]
You seem to want my opinion on this specific framing:
  • H0: zoonotic origin
  • Ha: the virus started in an animal, at some point downstream it was manipulated in a lab by humans, then at some point later it somehow got to infect the Dec 8 index case in Wuhan
For this specific framing, I oppose saying we have consensus on "zoonotic origin is more likely". I can change my mind if you bring a specific source that says otherwise, of course. Forich (talk) 17:36, 19 June 2021 (UTC)[reply]
My opinion on the WP:NOLABLEAK essay is this one. I am prepared to comment on every source mentioned there, you want me to do it for any specific one? Isn't its talk page a more apt place to have that discussion. If I have time, I'll do it there and bring the link here. Forich (talk) 17:47, 19 June 2021 (UTC)[reply]
In response to @Shibbolethink:'s commentary above (We follow what the sources tell us, not our own original research. It's not our place to start playing epidemiologist here. Tell me if I'm misreading.) that the standard you are proposing regarding the use of phrases taken out of context may lead to pointy edits that favor the lab leak hypothesis, such as using papers that speak of the Furin Cleavage Site being "inserted" or the virus having "escaped" in papers talking about a particular property of viruses regarding vaccination or treatments. I erroneusly did one edit like that myself (I apologize) to prove the point, but now I realize it was semi-vandalic and the crux of the point can be made here at the talk page in a less rude way. Forich (talk) 22:01, 19 June 2021 (UTC)[reply]
To avoid this getting unproductive or circular, I'll repeat my proposal:
To be very specific about the wording to use in relation to the evolutionary history suggested by reconstructions from molecular genetic analyses, please bring the most reliable sources (MEDRS and Primary research only, no news sources) that summarize our current state of understanding. Let's keep it short and use at most three (3) sources. Forich (talk) 22:05, 19 June 2021 (UTC)[reply]

:

This appears high on a Google Scholar search with keywords "SARS-Cov-2 evolution*":

Despite these recent discoveries, several fundamental issues related to the evolutionary patterns and driving forces behind this outbreak of SARS-CoV-2 remain to be fully characterized[3]
In the meantime of this discussion, I want to bring here the wording use by the New York Times in a recent piece: "having jumped from animals to humans, the explanation favored by most experts on coronaviruses." [4]. It is simple and I have no problems if we borrow it to the lead of this article. It is similar to the compromise proposed here (see last part of diff

, but without the "vast majority" part and withouth the too-general "origin" word. Anyone disagrees? Forich (talk) 16:49, 20 June 2021 (UTC)[reply]

The quote you give only says that "several issues remain to be fully characterized". Yes, there are plenty of unresolved questions, but that doesn't mean there isn't consensus on some aspects. I also don't understand why you're using a paper from June last year for this and then also don't accept statements from June last year that there is consensus (or even more recent papers that say the same thing). For context, the paragraph preceding that quote begins "Coronaviruses are naturally hosted and evolutionarily shaped by bats [4,5]. Indeed, it has been postulated that most of the coronaviruses in humans are derived from the bat reservoir [6,7]." and then continues "Although the specific route of transmission from natural reservoirs to humans remains unclear [5,13], several studies have shown that pangolins may have provided a partial spike gene to SARS-CoV-2; the critical functional sites in the spike protein of SARS-CoV-2 are nearly identical to those identified in a virus isolated from a pangolin [16–18]." That also indicates this particular paper might be a bit dated on this aspect since there are doubts about the links of pangolins to this. In any case, it's clear it is suggesting a natural origin, although it doesn't specifically mention zoonosis directly. RandomCanadian (talk / contribs) 21:32, 20 June 2021 (UTC)[reply]
The Tang et al (2020) article being outdated for being from June 2020 is a solid objection to using it to settle our debate on the current state of knowledge, and I have striked through its mention. I'd like us to discuss the exact wording and context used by much recent papers on this aspect of origin (evolutionary history reconstructed from molecular genomics). Myy conjecture after a couple of hours of perusing the literature is that none of the articles in top journals says or even dare to hint that there is "consensus". I invite all editors to participate in bringing the source and quotes that will helps us judge whether the conjecture is wrong. Forich (talk) 19:25, 21 June 2021 (UTC)[reply]
This argument seems outdated since the article no longer has the words "consensus" in that context. I personally am happy with "echoing the assessment of most virologists" or "echoing the explanation favored by most virologists." To me, the distinction is meaningless between these and "echoing a consensus of..." at least for our purposes here. But I understand the distinction may mean something to you, and that is fine. Building consensus is about compromise! I think it would be WP:UNDUE and skating WP:FRINGE/WP:NPOV problems to replace the current statements of "most virologists favor explanation X" with an extremely detailed and fraught run down of what there is and isn't agreement on. Could we have that elsewhere in the article? Yes! In the section Investigations_into_the_origin_of_COVID-19#Direct_zoonotic_transmission in particular I think that would be appropriate. But it is not a substitute for proper summarizing, which is what the statements in question are doing. We still need that.--Shibbolethink ( ) 19:36, 21 June 2021 (UTC)[reply]
I am perfectly happy with your message, and with the current wording. Apologize my nit picking on the word consensus, I am in the middle of writing a book chapter on likelihood assesments in science and it has made me a bit intolerant to reading tiny inaccuracies in that area. Forich (talk) 19:46, 21 June 2021 (UTC)[reply]
I endorse the wording change as well. Arguably more clear, since (as this discussion shows) the word 'consensus' can be interpreted pretty differently. The important concept is most virologists and most likely, not the specific word 'consensus'. Bakkster Man (talk) 20:15, 21 June 2021 (UTC)[reply]

Sorry if what I write here is verbose. I am not a paid contributor to wikipedia, and thus I'm able neither to check this page regularly nor contribute directly to the actual article.

Firstly, to deal with the use of the "consensus". Some level of expertise is apparently needed to deal with these articles. Science is at its core about the falsification of hypotheses. Anyone remotely familiar with this topic (eg. any university or above experience) should grasp this concept. Although Wikipedia has the goal of reporting on consensus where such a thing exists, any editor involved with science-focused articles must have this understanding going in, in order to assure that their edits and arbitrations do not misrepresent the very topic they are reporting on. I think it goes without saying that I strongly object to the suggestion of any "consensus" existing among the experts in related fields, which include not only virologists, but also geneticists, biochemists, biologists, bioinformaticians and all other experts who are involved with the process of gaining understanding on the origins of the virus. I would go on to respectfully suggest to any editor reading this who has previously recommended that some actual "consensus" should be described in these articles humbly excuse yourself from any involvement beyond preventing vandalism and the like.

Secondly, on hypothesis. A hypothesis is not a "conspiracy theory". A hypothesis is falsifiable. It is not the job of any editor here to chime in with their non-expert opinions about which hypotheses are "conspiracy theories" and which are not. I strongly disagree with the use of the phrase "conspiracy theories" in the first paragraph of this article. It is juxtaposed in such a way that leads a non-expert reader to correlate "several other explanations" with "conspiracy theories". The topic is notable for far-reaching reasons, and the fact that conspiracy theories are out there is in no way central to all inquiry into the question. In fact, considering the profound implications of the question at hand, any such mention should probably be left out of the lede altogether. The process of scientific discovery is not something that is helped by zealotry, quite the contrary. In direct reply to the solution offered directly above this comment, any use in this article of phrases like '"most virologists"' should be used with extreme caution. Lengths should be taken here to assume an especially strong stance of neutrality because this topic is very new, and hence very little literature exists beyond that which either forwards a hypothesis or provides argument in the form of conjecture. The later is now unusually ubiquitous most likely due to authors' and publishers' immediate concerns separate from any actual elucidation of the origins of the virus. In this spirit, I strongly disagree with the wording "most scientists say" in the lede. The lede, first and foremost, should emphasize that this is an open scientific question. An imperfect, but less objectionable wording would be something like "The origins ... remain an open question in relevant areas of research ... among the various proposed hypotheses ... natural origins is favored by a majority of scientists at this time." In other words, it is our job to show that it's an open question. Period.

Last, a quick acknowledgement to the topic of anonymous posts and other such contributions. I am grateful (as we all should be) to the anonymous IP user who started this thread. In their first reply, it appears that user RandomCanadian completely missed the valid points of that post and accused the IP account of "original research". Assuming good faith but with an understanding of what was written, that reply was absurd. (Please do not read the following as a personal attack in any form, I am only using the poor judgement of a certain editor as an example.) Being an established editor (and perhaps a paid one) on wikipedia does not make one an expert. Non-expert RandomCanadian (for example) should not be in a position to judge what constitutes a "credible paper". The very fact that RandomCanadian as of May 2021 couldn't find a single peer-reviewed source authored by an expert that argued towards a lab-origin shows at the very least that they don't have access to a basic database of journal articles, and probably that they don't have the relevant experience or skills to contribute to this article without doing far more harm than good. I think that, at least to anyone with the slightest bit of when maintaining a nuanced understanding of human social affairs, it should be quite apparent why there is a notable dearth of registered users here who are openly experts on this field. Very few principle investigators, post-docs or even grad students want to involve themselves publicly in such a forum, as the constant competition for grants from the likes of the NIH and other agencies is a strong motivator to remain anonymous. Assuming good faith as always.KristinaLu (talk) 02:00, 29 June 2021 (UTC)[reply]

References

  1. ^ https://science.sciencemag.org/content/372/6543/694.1
  2. ^ https://science.sciencemag.org/content/372/6543/694.1
  3. ^ Tang, Xiaolu; Wu, Changcheng; Li, Xiang; Song, Yuhe; Yao, Xinmin; Wu, Xinkai; Duan, Yuange; Zhang, Hong; Wang, Yirong; Qian, Zhaohui; Cui, Jie; Lu, Jian (2020-06-01). "On the origin and continuing evolution of SARS-CoV-2". National Science Review. 7 (6): 1012–1023. doi:10.1093/nsr/nwaa036.
  4. ^ Zimmer, Carl; Gorman, James (2021-06-20). "Fight Over Covid's Origins Renews Debate on Risks of Lab Work". The New York Times.

"deliberate bioengineering of the virus has been ruled out"

@RandomCanadian: What sources support the claim that "deliberate bioengineering of the virus has been ruled out" for both the bio-weapon conspiracy theory and accidental release from gain-of-function research? Numerous reliable sources contradict this, stating that the accidental release of a virus engineered via gain-of-function research is still a viable hypothesis.[15][16][17][18] Stonkaments (talk) 19:50, 16 June 2021 (UTC)[reply]

The Science source does not say that. Firefangledfeathers (talk) 19:58, 16 June 2021 (UTC)[reply]
The citation provided (Andersen et al 2020)[19] says: "It is improbable [emphasis added] that SARS-CoV-2 emerged through laboratory manipulation..." That is very different from ruling out bioengineering definitively, and it should not be attributed broadly to "experts", as it comes solely from the conclusion of one primary source. I believe we should update the article to more accurately represent and attribute these claims. Stonkaments (talk) 20:02, 16 June 2021 (UTC)[reply]
The Buzzfeed source does not say that. Firefangledfeathers (talk) 20:04, 16 June 2021 (UTC)[reply]
I am not eager to dig through your third and fourth sources, knowing the first two didn't check out. If you continue to contend that the sources state "that the accidental release of a virus engineered via gain-of-function research is still a viable hypothesis" by experts, could you please provide quotes? Firefangledfeathers (talk) 20:06, 16 June 2021 (UTC)[reply]
Buzzfeed clearly discusses the gain-of-function hypothesis as viable, in comparison with the bioweapon theory which they note most experts dismiss as a conspiracy theory. They write: "More elaborate versions of the theory suppose that scientists at the WIV or another lab in the city were engaged in well-intentioned but risky 'gain of function' experiments, genetically modifying a bat coronavirus to study the changes that would make it more likely to infect people. Suspicion has fallen on Shi because she had earlier collaborated on related experiments run by Ralph Baric, a virologist at the University of North Carolina, Chapel Hill. Baric’s team spliced the spike protein from one of Shi’s bat coronaviruses, which it uses to latch on to the cells it infects, into another coronavirus that had been adapted to infect mice. Shi has denied running any similar gain-of-function experiments since that research was published in 2015. But secrecy surrounding research at the WIV and other labs means that speculation about this possibility continues." Stonkaments (talk) 20:12, 16 June 2021 (UTC)[reply]
Mentioning the theory and stating that speculation continues does not equate to a statement that contradicts that the theory "has been ruled out by experts". Firefangledfeathers (talk) 20:15, 16 June 2021 (UTC)[reply]
It's implied, no? When they discuss the bioweapon theory, they clearly say it is regarded as a conspiracy theory by most experts. The fact that they don't make the same statement about the gain-of-function leak theory implies that it does not have the same level of opposition from experts. Regardless, it appears that editors won't put much weight on any sources that aren't published scientific journals, so it's a moot point. Stonkaments (talk) 20:27, 16 June 2021 (UTC)[reply]
Buzzfeed and Vox are not WP:RSes for matters of science, they are trumped by a consensus of literature sources. That Science letter-to-the-editor does not mention "gain-of-function," "engineering" or "deliberate" in any way. It does not support your claims here. The MedPageToday link is an opinion piece written by an Anesthesiologist, so not in any way a relevant expert. The burden is on you, Stonkaments, to provide evidence and gain consensus on the deletion of content you're putting forward, given that we have a small consensus from various editors contributing to that section. And the bar of this is high, given the many MEDRSes we have cited here to support the statement in question. So far, I don't think you've met that bar.--Shibbolethink ( ) 20:05, 16 June 2021 (UTC)[reply]
Ok, here's another source published in a scientific journal[20], which says: "The leak scenario involves researchers tinkering around with a virus, perhaps in gain of function experiments..." This clearly shows that accidental escape from gain-of-function research has not been ruled out. Stonkaments (talk) 20:07, 16 June 2021 (UTC)[reply]
That is one version of the lab leak theory. There are other versions. The fact that many versions co-exist does not mean that they have equal probability. Experts have largely ruled out that version, as shown by the sources we have in that section, and most of all, based on the many sources over at WP:NOLABLEAK. --Shibbolethink ( ) 20:11, 16 June 2021 (UTC)[reply]
New Scientist also is not a very reputable journal, given its very poor stats on SciMago, so it would be WP:UNDUE for us to give it much credence, as per WP:RSUW. It's very very far from a MEDRS or high-quality RS. That article is basically an opinion piece. Honestly might as well be published in Medical Hypotheses. --Shibbolethink ( ) 20:17, 16 June 2021 (UTC)[reply]
Per WP:RS/AC: "A statement that all or most scientists or scholars hold a certain view requires reliable sourcing that directly says that all or most scientists or scholars hold that view. Otherwise, individual opinions should be identified as those of particular, named sources." Are there any sources that directly say that most experts have ruled out a virus engineered via gain-of-function research? Otherwise any such claim would be WP:SYNTH, and we need to attribute it narrowly to the individual sources making the claim. Stonkaments (talk) 20:19, 16 June 2021 (UTC)[reply]
From the WHO report: We did not consider the hypothesis of deliberate release or deliberate bioengineering of SARS-CoV-2 for release, the latter has been ruled out by other scientists following analyses of the genome. citing [21]. We've had this discussion before, several times. Worth noting two things: the text specifically says that it's deliberate bioengineering for release that was ruled out. Later discussion concluded that the diagram they presented for the scenario included only general viral mutations unavoidable with replication, not "Adaptation, transmissibility increase". I think there's room for us to either reword this to be more clear, or make a note or comment in the article or its code describing this so we can avoid repeating the discussion (at least, due to that lack of context in the article, someday we'll have actual new info to replace it). Bakkster Man (talk) 20:50, 16 June 2021 (UTC)[reply]
And this is exactly the "scientific consensus statement in RS" we need. The WHO, upon examining all of the evidence available to the, "did not consider" the hypothesis because it "has been ruled out by other scientists". Sure, people may disagree with that - and that's their right. But when the WHO (a RS) states in no uncertain terms that they believe the issue has a consensus among scientists such that they don't even need to go over it, then that's about the strongest source for a "scientific consensus" statement in WP voice you can get. -bɜ:ʳkənhɪmez (User/say hi!) 20:58, 16 June 2021 (UTC)[reply]
Yes, I think it's significant that they only say that deliberate bioengineering for release was ruled out. The article previously included the wording "for release", but it has been lost in recent edits, so at the very least that should be restored (and probably clarified/reworded−I initially found the meaning of the phrase "for release" unclear without the additional context). Also, the latter half of the sentence ("with remaining investigations considering the possibility of a collected natural virus inadvertently infecting laboratory staff during the course of study") implies that only a natural virus lab escape scenario is being investigated, but that is contradicted by one of its cited sources (the New Scientist article), which discusses the gain-of-function lab leak possibility. Stonkaments (talk) 21:34, 16 June 2021 (UTC)[reply]
New Scientist isn’t really an academic science journal. As to whether any science articles have ruled out engineering - yes, this is the conclusion of the first major work on this topic, Andersen et al [22], which remains the authoritative work on the issue, cited approvingly and over 1,500 times. Surely if you’re arguing on this page about this topic you’re at least aware it exists. -Darouet (talk) 21:45, 16 June 2021 (UTC)[reply]
Yes, I mentioned Andersen et al above. They did not in fact rule out bioengineering; they say: "It is improbable [emphasis added] that SARS-CoV-2 emerged through laboratory manipulation..." Stonkaments (talk) 21:49, 16 June 2021 (UTC)[reply]
@Stonkaments: see again Talk:Investigations into the origin of COVID-19#Later discussion for discussion on the somewhat fuzzy middle ground of GoFR relating to the WHO report. Bakkster Man (talk) 21:48, 16 June 2021 (UTC)[reply]
I should have read the sources I cited more thoroughly. Frutos et al. (recent review paper, after the WHO report) says the following three things, very clearly:

The only remaining rational option for the origin of SARS-CoV-2, is that of a naturally occurring virus circulating in the wild which came into contact with humans.

There is consensus within the scientific community to consider that SARS-CoV-2 has not been engineered and is a naturally occurring virus.

And

Considering that SARS-CoV-2 is a naturally occurring virus, the main question is then to understand how such a virus can come into contact with humans and cause a major pandemic.

I think that seals the deal as far as "deliberate engineering" is concerned. Frutos is quite clear that the scenario found unlikely [but not ruled out] is the "accidental infection of laboratory staff working on naturally occurring Sarbecoviruses". He also spends quite a lot of time refuting many of the claims about deliberate engineering, under section 1.1. Unless you can find an equally good source (review paper focused on the origin of the virus in a reputable journal) which says otherwise, but given that my attempts so far (not much progress because it's a waste of time when we keep getting bombarded with Buzzfeed, WSJ and the like) haven't come up with anything promising, with most scientific papers giving short shrift or entirely ignoring any controversy about the topic. RandomCanadian (talk / contribs) 22:00, 16 June 2021 (UTC)[reply]
If I'm not mistaken, the Frutos source is just prior to the publication of the WHO report, and I didn't see a direct reference to it on a quick search. Doesn't mean it's not a solid source that can improve a lot of our citations, though. Bakkster Man (talk) 22:08, 16 June 2021 (UTC)[reply]
@Bakkster Man: For your convenience, here is a direct mention: (section 1.5) "This hypothesis has been considered as “extremely unlikely” by the official WHO investigation team" RandomCanadian (talk / contribs) 22:18, 16 June 2021 (UTC)[reply]
Thanks. I suspect that was between preliminary findings and full report, hence the lack of a citation at the bottom. Bakkster Man (talk) 22:27, 16 June 2021 (UTC)[reply]
Thank you for the link; it's hard to keep up on all the separate threads of this discussion! This Nature article[23] was cited as a good, reliable summary of the current state of understanding, and they provide yet another example showing that the possibility of an engineered virus lab leak hasn't been ruled out. They say: "In theory, COVID-19 could have come from a lab in a few ways. Researchers might have collected SARS-CoV-2 from an animal and maintained it in their lab to study, or they might have created it by engineering coronavirus genomes....There is currently no clear evidence to back these scenarios, but they aren’t impossible." Stonkaments (talk) 22:07, 16 June 2021 (UTC)[reply]
I think the Nature article is referring to claims made by others, not necessarily the WHO's evaluation. Bakkster Man (talk) 22:11, 16 June 2021 (UTC)[reply]
I think that's right, but of course we mustn't rely solely on the WHO. If other scientists still consider the engineered virus lab leak hypothesis viable, and the WHO itself only ruled out deliberate engineering for release, that should inform how we present the information. Stonkaments (talk) 22:20, 16 June 2021 (UTC)[reply]
We should present the information in proportion to its presentation in scientific peer-reviewed literature. Over at WP:NOLABLEAK, you'll see that most scientific studies in reliable peer-reviewed well-regarded journals portray the GoFR theory as not worth considering. It doesn't matter what a small minority of non-virologist scientists think. This is analogous to climate change, where some non-climate-trained scientists have fringe theories, that we don't really cover in any considerable depth. that's what WP:RSUW tells us to do.--Shibbolethink ( ) 22:23, 16 June 2021 (UTC)[reply]
@Stonkaments: I broadly agree. While the WHO is one of our most authoritative sources and the best starting place (IMO), if we have other strong (but contradictory) WP:SCHOLARSHIP sources then we shouldn't wikivoice this and instead move it to the WHO section. Maybe I've missed it in all the chaos around the topic, but I believe we've only got some non-virological journal articles (in vivo being the strongest IIRC) proposing this alternative. I'm somewhat hesitant to support adding a section on the idea if that's the best source we have and we'd have to make very clear that it's a WP:FRINGE view, but I'm not necessarily 100% opposed to it. If you think it could be well sourced, NPOV, and recognize FRINGE; I welcome you to start sandboxing it in a new section of User:Bakkster_Man/Origin Sandbox and I'll lend a hand to see if we can get it to a reasonable state for an RfC-type discussion. Bakkster Man (talk) 13:44, 17 June 2021 (UTC)[reply]

Stonkaments, I think where we're getting confused here is the conflation of "ruled out" with "impossible." That's not really how scientific theories work. A theory can be, for all intents and purposes, be "ruled out" but still technically "possible." Basically nothing, no conspiracy, no absurd theory in science is "impossible." It's "possible" that aliens will land tomorrow and declare the entire human race to be an experiment into the efficacy of balogna in preventing Alzheimer's, but it isn't very probable. Likewise, the genetic engineering GoFR theory cannot be described accurately as "impossible," but our sources indicate it is so improbable, so extremely unlikely, that most relevant experts have ruled it out as not worth considering. That's why the article is written the way it is.--Shibbolethink ( ) 22:17, 16 June 2021 (UTC)[reply]

I see your point, and I agree with the distinction. But which sources are you referring to, that so strongly dismiss the GoFR theory? Because the only two sources cited in the article for the claim about bio-engineering being ruled out are: 1) The WHO report, which only rules out bioengineering for deliberate release; and 2) Andersen et al, which is quite dated at this point and merely calls the lab manipulation theory "improbable". Stonkaments (talk) 22:27, 16 June 2021 (UTC)[reply]
What about purple cows in Arkansas Frutos et al. (cited and quoted above)? RandomCanadian (talk / contribs) 22:31, 16 June 2021 (UTC)[reply]
They found no evidence for the GoFR theory. That is not enough to support the broad claim that experts have ruled it out, especially when other sources show that others have not ruled it out. Stonkaments (talk) 23:13, 16 June 2021 (UTC)[reply]

Serial passage and the phrase "deliberate engineering of the virus has been ruled out by experts"

Does no one editing this article have even a cursory understanding of current genetic engineering techniques?

Segreto, R., Deigin, Y., McCairn, K. et al. Should we discount the laboratory origin of COVID-19?. Environ Chem Lett (2021). https://doi.org/10.1007/s10311-021-01211-0

Sirotkin K, Sirotkin D. Might SARS-CoV-2 Have Arisen via Serial Passage through an Animal Host or Cell Culture?: A potential explanation for much of the novel coronavirus' distinctive genome. Bioessays. 2020;42(10):e2000091. doi:10.1002/bies.202000091

Just because a secondary source claims that something has been ruled out does no make it so. One needs to read other secondary sources before making such a strong claim. If those other sources are ignored, there is a problem.KristinaLu (talk) 02:24, 29 June 2021 (UTC)[reply]

Even the first source you cite accepts that zoonotic transmission is the consensus: The near-consensus view of the origin of SARS-CoV-2 is a natural zoonosis (Zhu et al. 2020; Wu et al. 2020b; Zhou et al. 2020b). Bats are thought to be the natural reservoir for SARS-related coronaviruses (SARS-r CoVs) (Li et al. 2005; Wang et al. 2006) and have been identified as the ancestral source from which severe acute respiratory syndrome coronavirus (SARS-CoV) evolved (Janies et al. 2008; Sheahan et al. 2008). And their conclusion was the amount of peculiar genetic features identified in SARS-CoV-2′s genome does not rule out a possible gain-of-function origin, which should be therefore discussed in an open scientific debate. While I am not a virologist, much of the paper appears to be discussing theoretical possibilities rather than actually showing that there is any real chance that what they are suggesting actually happened. Hyperion35 (talk) 19:43, 29 June 2021 (UTC)[reply]
Claiming near-consensus means there is a consensus is like saying somebody's near-win of an election means they won. Terjen (talk) 22:23, 29 June 2021 (UTC)[reply]
It was the manuscript's wording not Hyperion's! I agree, it's like saying "near-homologous." You either are or you aren't, there is no "near." But overall this manuscript is not useful for our purposes, given that not a single working virologist was involved in its authorship, it is entirely an opinion piece, and it was published in a journal that is not reliable for extremely controversial virology claims.--Shibbolethink ( ) 22:30, 29 June 2021 (UTC)[reply]
@Hyperion35:Thanks for the quote, you made my point for me. Genomic evidence does not rule out the possibility that the virus was engineered.KristinaLu (talk) 22:46, 30 June 2021 (UTC)[reply]
I also cannot rule out the possibility that Christina Hendricks will come knocking on my door to declare her everlasting love for me. However, this possibility, while not technically impossible, can probably be safely declared to be highly unlikely. Hyperion35 (talk) 15:53, 1 July 2021 (UTC)[reply]
@KristinaLu: See WP:NOLABLEAK section: Against bio-engineering or gain of function particularly "Passaging in animals" and "Passaging in a petri dish".
There are fundamental problems vis a vis the Synonymous/Non-synonymous ratio [24] and the presence/location of O-linked glycans on the spike protein. These are a few of the pieces of evidence among many that make virologists like myself conclude (with a fair amount of certainty, but not 100%) that neither engineering nor large-scale lab passaging of the virus likely occurred prior to the outbreak. --Shibbolethink ( ) 22:30, 29 June 2021 (UTC)[reply]
@Shibbolethink: The section cites a self-published source. The article sourced is apparently not even on a preprint server. Are you the author of this? If so, please stop trying to insert your unpublished material into Wikipedia.KristinaLu (talk) 22:18, 30 June 2021 (UTC)[reply]
KristinaLu I linked you to a user space essay. Reliable source requirements do not apply to user space in the way that they apply to article space. --Shibbolethink ( ) 22:21, 30 June 2021 (UTC)[reply]
Sure. But right now we are on the talk page of an actual article. In other words, your self-authored POV that isn't even up on biorxiv can't be considered when deciding on whether the sentence in question stays in this article. Again, this article needs to remain neutral. You yourself agree that the question at hand isn't entirely falsifiable based on current evidence. Therefore, just by an epistemological argument alone the sentence needs to be cut.KristinaLu (talk) 22:37, 30 June 2021 (UTC)[reply]
my Reddit post is A) not the basis for that claim and B) based on inline cited secondary sources which are themselves part of the basis for this sentence. The sentence in this article is based on cited WP:RS sources. which of those sources do you have a problem with? Or are you saying your original research is the reason for why it should be cut?--Shibbolethink ( ) 22:41, 30 June 2021 (UTC)[reply]
I don't need to have a problem with any of the sources in order for the sentence to be removed.. The issues is that you know that other published, peer-reviewed sources exist, and you are choosing to ignore them.KristinaLu (talk) 00:06, 1 July 2021 (UTC)[reply]
Which source am I ignoring? The Segreto et al piece in Env Chem Letters? That article is not a RS for this question. A) none of its authors have any training in virology. B) that journal is not very reliable for peer-reviewing any publication about virology, given that the words "virus" and "virology" do not appear in its descriptions or any Web of Science index search terms. See also evaluations of the journal's content areas of expertise and impact [25] [26] [27]. Its editors are not experts in this field, so they are not as able to determine what is and is not good scientific reasoning in the field of virology as subject-area journals (Journal of Virology, Medical Reviews of Virology, or Current Opinion in Virology) or broad-topic journals (e.g. Nature, Science). The editors of Env Chem Lett also are likely not as good at picking high-quality peer reviewers for the same reason. Overall, these are the reasons why that piece is not a RS for these extremely controversial claims.--Shibbolethink ( ) 00:31, 1 July 2021 (UTC)[reply]

@KristinaLu: could you please take this argument to the other section of this page about this exact thing. And examine the arguments made there and respond to them. Because repeatedly addressing this claim is a huge drain on wiki resources.--Shibbolethink ( ) 22:51, 30 June 2021 (UTC)[reply]

@Shibbolethink:I created this talk section. It is based on the lab technique know as serial passage. It is original in its content. Please do not change the title of this section again. The other arguments are irrelevant to this one. Thank you.KristinaLu (talk) 23:59, 30 June 2021 (UTC)[reply]

You do not own this section. Anyone can change the talk heading, because we all own this talk section, together. An informative and useful neutral heading is required. See WP:TALKHEADING.--Shibbolethink ( ) 00:03, 1 July 2021 (UTC)[reply]

@Shibbolethink:As soon as you admitted yourself that laboratory manipulation of the virus is not 100% ruled out, you have roundly lost this argument. The sources do not agree.KristinaLu (talk) 23:59, 30 June 2021 (UTC)[reply]

Don't treat this as a debate to WP:WIN. It's not AGF and runs afoul of wiki policy. This is a discussion. See my comments above in the other section re: "ruled out" vs "100% impossible." Something can be ruled out by scientists without being 100% impossible. It happens all the time.--Shibbolethink ( ) 00:03, 1 July 2021 (UTC)[reply]
@Shibbolethink:This is simple. Do you, or don't you agree that the peer-reviewed academic sources I have provided directly conflict with the sentence in question?KristinaLu (talk) 00:27, 1 July 2021 (UTC)[reply]
As I explained above, the Segreto et al source is not reliable for evaluating the veracity of the sentence in question.--Shibbolethink ( ) 00:31, 1 July 2021 (UTC)[reply]
To address the Bioessays publication, many of the same criticisms apply as the Env Chem Letters paper. But it is even worse given that it is not an actual research journal. It is a hypotheses journal. [28] AKA papers published there do not actually have to be backed up by direct evidence. You can just publish commentary or essays without in-line citations and without anyone evaluating the actual verifiability of your claims. The source in question is not a review. It isn't a research article. It's a commentary and proposed hypothesis. For these reasons (and the reasons for the Env Chem Letters paper as described above), that Bioessays paper is not a reliable source to evaluate the veracity of the sentence in question.--Shibbolethink ( ) 00:51, 1 July 2021 (UTC)[reply]
I guess we can take your silence to mean that you agree. It seems like we are all in agreement that there are peer-reviewed academic sources that directly conflict with the sentence in question.KristinaLu (talk) 02:35, 1 July 2021 (UTC)[reply]
Putting words in another editor's mouth is incredibly bad form. Just FYI, that sort of behavior comes across as a failure to AGF and it makes people question whether there is any point, or really any reasonable possibility, of having a productive conversation with you. There is nothing wrong a rather large difference with between asking do you agree with me on this statement? and asserting that another editor agrees with you when it seems obvious from their comments that they do not. Hyperion35 (talk) 16:00, 1 July 2021 (UTC)[reply]
@Shibbolethink: and @Hyperion35:, please answer the following question directly. (It's a yes or no question.) Do you, or don't you agree that the peer-reviewed academic sources I have provided directly conflict with the sentence in question?KristinaLu (talk) 18:07, 1 July 2021 (UTC)[reply]
@KristinaLu:, that is not a yes or no question. It is also not really a relevant question. Shibbolethink has already addressed multiple problems with the sources you have provided, including the fact that one of your sources is not even peer-reviewed. I have also addressed the content of one of your sources. I am deply concerned that you may be either misunderstanding what other editors are telling you, or you appear to be possibly misrepresenting other editors' comments and views. I am also concerned because your comments come across as trying to "win" an argument, and because you appear to be attempting to justify an a priori assumption. Hyperion35 (talk) 18:49, 1 July 2021 (UTC)[reply]
@Hyperion35:Actually, it is a direct yes or no question. The question as to whether the sources are WP:RS is another question. Surely, you can admit to the futility of multiple editors arguing several points at once and not directly addressing an explicit point. I again ask that you and @Shibbolethink: answer the following: Do you, or don't you agree that the peer-reviewed academic sources I have provided directly conflict with the sentence in question?KristinaLu (talk) 23:14, 1 July 2021 (UTC)[reply]

Shibbolethink I agree with KristinaLu that the statement should be edited to reflect the WP:OPINIONs of the "experts" cited in the references provided - using WP:INTEXT attribution. We have statements from Ralph Baric and David Baltimore countering the premise of the statement [29] [30], outweighing all MEDRSs published on the subject to date. The Proximal Origin paper should either be removed for WP:FALSEBALANCE or juxtaposed with the Relman et al Science letter for proper WP:BALANCE, given all the reasons discussed above [31]. CutePeach (talk) 01:58, 1 July 2021 (UTC)[reply]

Do you have any WP:RSes that show that their opinions are notable and that including them would be affording due weight? Because I am aware of no such sources. It is frankly difficult to find any RSes that even mention the names "Yuri Deigin" or "Rossana Segreto." And even if you could find such RSes, we would need to figure out what would be "proportional coverage" of these minority views. From my cursory searches of the literature recently, I could not find a single mention of these 2 publications in any review articles published in scientific journals, or frankly even in any news-based RSes (See Altmetric: [32] [33]).--Shibbolethink ( ) 17:38, 1 July 2021 (UTC)[reply]

Some potential consensus proposals, based on my read of how we ended up with the text we have currently.

  • Text originally came from the WHO report wording: We did not consider the hypothesis of deliberate release or deliberate bioengineering of SARS-CoV-2 for release, the latter has been ruled out by other scientists following analyses of the genome. One possibility would be to specifically attribute this statement to the WHO.
  • Remove all evaluation of likelihood from this section, as it is the only one of the four WHO-evaluated explanations listed in this section. This would better match the original intention of providing an entirely neutral description of the possibilities to avoid confusion when referring to one or the other, with any evaluation happening elsewhere.
  • Add section specifically for lab engineering, where it can be more neutrally described as a fringe perspective without affecting the discussion of the lab leak section we're discussing currently.

Suggestions could be taken individually or together. Each of them carry some RS, NPOV, and DUE concerns in varying measures, but framing the discussion this way may help us better find a consensus. Bakkster Man (talk) 18:06, 1 July 2021 (UTC)[reply]

@Bakkster Man:Thank you for your suggestions. I would like to point out a bit of a semantic issue here, that is around the term "engineered". There are common lab protocols in which a virus (or bacteria) can be altered, where by convention the literature may not directly use the term "engineered". For the sake of clarity to non-experts, perhaps the word "engineered" should be avoided. We can also remove anything presuming any intent by those who might have altered the virus (eg. if serial passage was used in order to facilitate the evolution of a SARS-like bat CoV so that other mammalian cell lines could be readily infected for the sole purpose of well-intentioned medical research). In other words, the section could deal with two possibilities, that someone working in the lab was infected with a virus that was either:
a) Naturally occurring and being studied by the lab, the first infected person being infected by a virus very close to that found in a host animal in vivo in a non-laboratory setting
or
b) Had been intentionally altered in some way (regardless of the nature of said intent), perhaps by serial passage as this is the method of alteration most commonly suggested in existing literature.KristinaLu (talk) 18:33, 1 July 2021 (UTC)[reply]
I really think "intentionally manipulated" or "laboratory manipulation" are the best terms to encompass both genomic engineering (CRISPR etc) and serial passaging.--Shibbolethink ( ) 19:18, 1 July 2021 (UTC)[reply]
Agree.KristinaLu (talk) 23:05, 1 July 2021 (UTC)[reply]
I mean since we have a few non-WHO sources which also support the sentence in question about deliberate engineering (or laboratory manipulation is another way to say it), I do not think it would be appropriate to change this sentence to be only about the WHO. I also think the word "engineering" is appropriate since it is how most lay people think about this topic. I would also accept "laboratory manipulation" personally. I agree that passaging also should count, but I would say that it is also intentional. A virus will not passage in a novel species or cell line without human intervention. Somebody needs to actually take liquid from one petri dish (or nostril) and put it into another. That's intent. Calling passaging "non-intentional" just further obfuscates the language. But, again, our sources also support the idea that a passaged virus is not very likely. Including the Kristian Andersen piece, which directly answers the question of cell culture and lab animal passaging. [34] They go into detail about the glycans, the cleavage site, the lack of any evidence of reverse genetics. And the mutation rate. Also worth saying that, although this is OR, several papers have shown how the virus changes in cell culture, and no such changes were observed in the initial sequence. [35] This just adds to the low likelihood of manipulation via any kind of cell culture. We had a whole discussion about this recently, and the WHO source mentions "manipulation." To my reading, that includes "passaging." So again, I think it is quite clear from our sources that "laboratory manipulation" has been ruled out, including any passaging experiments. Seriously we've talked about this several times before. Search the talk page archives here and Talk:COVID-19 misinformation. Bakkster Man Do you remember that conversation we were having about what the WHO report had about lab manipulation? And its diagrams? Anyway, all of which to say, I'm quite convinced the MEDRSes and RSes (BEST SOURCES) have ruled out passaging as well. We don't need to relitigate old wounds a zillion times around this when no new sources have been provided to overturn that consensus formed on this talk page.--Shibbolethink ( ) 19:05, 1 July 2021 (UTC)[reply]
@KristinaLu: Some of this came from previous discussion in Talk:Investigations into the origin of COVID-19#Later discussion, primarily about the WHO report's description and conclusions. Particularly Figure 5 from the WHO Report's "Possible Pathways of Emergence" section, which shows "evolution" in the lab pathway, but not "Adaptation, transmissibility increase." As mentioned in the above discussion section, this seems to allow for some incidental variation as is unavoidable in viral replication, but doesn't include gain-of-function (and possibly not even serial passage).
Expanding beyond the WHO-evaluated hypothesis just makes it trickier to delineate the various related hypotheses. Not everyone refers to the same set of circumstances as a 'lab leak', which is part of why I suggested splitting the description here between what the WHO evaluated, and what scientists like Baltimore said remains plausible (if unlikely). What I think needs to be avoided is implying that the WHO's report evaluated GoFR (for example) as 'extremely unlikely', when they actually did rule it out beforehand. And, unfortunately, they weren't explicit enough regarding serial passage to know if they considered it ruled out explicitly, or only malicious design as a bioweapon. Also unfortunately, we don't have really high quality journal sources describing the proposed serial passage or GoFR pathways (something I agree with others on the two sources you listed originally). Which isn't to say we can't include them, but without mainstream secondary sources that does point to their being WP:FRINGE/ALT] and described as non-mainstream appropriately. Bakkster Man (talk) 19:09, 1 July 2021 (UTC)[reply]
Regarding secondary sources, both the Andersen et al and the WHO-China are themselves in effect primary sources. A degree of nuance is needed here because we are dealing with everything still being at the stage of hypothesis. It should be pointed out that both of these sources which are widely cited in this particular article have been widely criticized themselves. In order to understand these circumstances surrounding our sources one particularly needs to take note of the statements made by Dr. Ralph S. Baric, among many others.KristinaLu (talk) 00:16, 2 July 2021 (UTC)[reply]
I see your point now. The WHO-China source is actually a secondary source on this topic. It doesn't even deal with the possibility that the virus may have been passaged. For reference, here's the sentence of the WHO-China report:
"We did not consider the hypothesis of deliberate release or deliberate bioengineering of SARS-CoV-2 for release, the latter has been ruled out by other scientists following analyses of the genome."
Their source for this is Andersen et al source.
The language in this article at this time is:
"Based on the available genomic evidence, deliberate engineering of the virus has been ruled out by experts, with remaining investigations considering the possibility of a collected natural virus inadvertently infecting laboratory staff during the course of study."
@Bakkster Man:I suggest it read as follows:
According to the joint WHO-China report, the likelihood of "deliberate bioengineering of SARS-CoV-2 for release" has been ruled out based on genomic evidence. Other sources call for further investigation into the possibility that a virus may have infected laboratory staff during the course of study. Sentence about a collected natural virus inadvertently vs laboratory manipulation.
Looking forward to your input.KristinaLu (talk) 00:55, 2 July 2021 (UTC)[reply]
@KristinaLu: I'm broadly in favor of this, it's pretty close to the original text of the section when added. I don't think the "other sources... further investigations" sentence is needed if we explain infection with a naturally collected virus. My one issue (and possibly that of Shibbolethink) is that we would need to have another section describing the possibility of serial passage and/or GoFR. The question is: do we have enough reliable sources to consider that a credible explanation, or is it also considered ruled out? We might be somewhat in between: call "deliberate bioengineering of SARS-CoV-2 for release" ruled out conclusively, and use less definitive words for the unlikelihood or lack of evidence for serial passage/GoFR. Bakkster Man (talk) 14:08, 2 July 2021 (UTC)[reply]
Bakkster Man, KristinaLu, I have a problem with the phrase "for release."
There is no difference, viral genomic evidence-wise, and Andersen et al-wise (as well as other experts' assessments) between engineering "for release" and engineering "for lab experiments."
We must also follow the consensus on the report's name as found elsewhere on this talk page: "WHO-convened report."
We also have several other experts and groups who have more precisely said "there is no evidence for" laboratory manipulation. I think that is the more accurate statement anyway. See these sources as well [36](secondary source reviewing Andersen and others) [37] (expert opinions determining same)[38][39]. It isn't just the WHO report we're relying on. So it may be better to say:
Many experts have dismissed laboratory manipulation as a plausible origin, due to a lack of supporting evidence, and the overwhelming evidence in favor of a natural origin.[citations]
It's also not appropriate to use "thread-mode," as discussed in WP:HOWEVER. These sources are not disagreeing, so we should A) not depict them as if they are, and B)not directly juxtapose them even if they were disagreeing. One can have ruled out deliberate bioengineering, and still support further investigation. So I would oppose the wording "Other sources" and prefer something like "Multiple scientists and government officials have called for further investigation into the possibility of a natural virus released accidentally from a laboratory."
--Shibbolethink ( ) 15:17, 2 July 2021 (UTC)[reply]
Although we are on a talkpage here, what actually goes in the article needs to follow WP:NOR. Because we are dealing with a singular source here, and because leaving out "for release" would clearly change the meaning of what was said in the report, some such wording needs to be included.KristinaLu (talk) 20:06, 2 July 2021 (UTC)[reply]
  • I am not sure what this is all about. Can the source in question be used on the page? Yes, it can, simply because it does not claim anything extraordinary or fringe. It say (Abstract) there is still no clear evidence of zoonotic transfer from a bat or intermediate species. Yes, sure, no one found the specific population of bats where this virus came from, patient zero, or an intermediate host (if any). It say The search for SARS-CoV-2′s origin should include an open and unbiased inquiry into a possible laboratory origin. Yes, sure, such opinion was expressed by many people in many publications. An inquiry is always good. What's the problem? "Serial passage"? Let me quote user Shibbolethink above: These are a few of the pieces of evidence among many that make virologists like myself conclude (with a fair amount of certainty, but not 100%) that neither engineering nor large-scale lab passaging of the virus likely occurred prior to the outbreak Here are some key words: "large-scale" and "likely". Translation: some artificial selection or "small-scale" passage could of course occur. My very best wishes (talk) 18:45, 1 July 2021 (UTC)[reply]
I think you may misunderstand what I mean when I say "large-scale." The "small-scale" alternative would be indistinguishable from an accidental release of a natural virus. Any time we put a virus in cell culture, it mutates a bit. A very small number of "passaging generations" could conceivably remain undetected and indistinguishable from natural virus. To me, it is equivalent to a natural virus that's just being kept in the lab. It's just being kept in the lab in a different way (in a bat blood sample versus made clonal in cell culture but not adapted). But overall, to a virologist, that distinction doesn't matter. Both are equally likely, and neither are very likely. Both are more likely than GoFR (including serial passage). And both are less likely than a zoonotic event. It hasn't truly "adapted" in the case of small-scale passaging. And if it had been "cell culture adapted" then it would be detectable via cell culture adaptation mutations. And that's what has been ruled out. It's not a useful distinction (passaged but not adapted versus just bat blood in a freezer), and no RSes make that distinction.--Shibbolethink ( ) 19:16, 1 July 2021 (UTC)[reply]
@My very best wishes:I would like to mention a few things that Shibbolethink left out.
1) RNA viruses have the highest mutation rates known. More than DNA viruses, more than any known bacterium. Even if a SARS-like bat CoV was only intentionally passaged in vivo in a lab setting in live animal hosts, given that the WIV could easily have had as long as 6 years to manipulate the virus, surely some significant change could occur. The preceding is WP:SYN, but I would be happy to verify with sources. In lay terms, the suggestion that no significant change would occur in 6 years of serial passage through ferrets or cats is absurd.
2) Several other mammal species have receptors that are so similar to human ACE2 that convention in scientific literature is to actually refer to them as ACE2 (See: Sarkar & Guha, "Infectivity, virulence, pathogenicity, host-pathogen interactions of SARS and SARS-CoV-2 in experimental animals: a systematic review"[[40]]). We can see in fact that COVID has not only spread in various feline species but also widely in mink farms, with mink species being members of the family Mustelidae as are ferrets. Ferrets have notably been used in laboratories to study SARS, so one can easily imagine (WP:OR) that such a scenario would have existed at WIV, where serial passaging of SARS-like bat CoVs is known to have occurred.
3) There is nothing to rule out some combination of in vivo and in vitro serial passage of a SARS-like bat CoV having occurred at WIV.KristinaLu (talk) 23:45, 1 July 2021 (UTC)[reply]
KristinaLu This is the challenge. The WHO does not appear to have considered 6 years of serial passage as a possibility in their lab scenario. That would have certainly been labeled in their figure with "adaptation and transmissibility increase". Hence the need to split any section so that we can describe the scenario the WHO evaluated (no serial passage), from any scenario which other sources evaluated (serial passage/GoFR). Bakkster Man (talk) 14:08, 2 July 2021 (UTC)[reply]
@Bakkster Man:Thanks very much for bringing things into focus. I definitely agree that this section be split up between the scenario the WHO described (being attributed that that source) on the one hand, and then other scenarios (intentional manipulation and escape of "natural" virus) on the other hand. (I think that goes along with what you're suggesting here?) As for the "adaptation and transmissibility increase" figure I will try to take a look in order to better respond when I have time. Thanks again!KristinaLu (talk) 08:34, 3 July 2021 (UTC)[reply]
@KristinaLu: Yes, that would be essentially what I'm proposing. The current paragraph should stay as the WHO-scenario, and whether we add a second paragraph depends if there are sufficient reliable (and WP:SCHOLARSHIP) sources to describe another scenario. Last I checked, we're light on those. Any you can find would be great. Bakkster Man (talk) 11:59, 4 July 2021 (UTC)[reply]

When did I suggest "that no significant change would occur in 6 years of serial passage through ferrets or cats" ? Certainly it would. The issue is that 6 years of passage in an animal model would A) also significantly screw up the synonymous/non synonymous ratio of SNPs in the genome, B) adapt to that animal model, and C) /very likely/ be attenuated in humans as a result. --Shibbolethink ( ) 00:35, 2 July 2021 (UTC)[reply]

What we have is a) something far less deadly than SARS (ie. potentially somewhat attenuated) and b) something that transmits readily between people (as we would see with something that was passaged through an animal host with similar ACE2 receptors). Your statements about SNPs are of course WP:OR. As far as I know that point would only be relevant for passage through cell culture. Of course, we don't have a wild-type genome for comparison anyway (since the WIV hasn't released the genomes of the SARS-like bat CoVs they were working with) so all of this goes beyond the scope of any relevant discussion here.KristinaLu (talk) 01:39, 2 July 2021 (UTC)[reply]

The other problem with your message has to do with your description of the mutation rate. what matters is not just the raw mutagenic incidence of the polymerase, but also the population level fixation rate of the quasi-species "cloud" of viral genomes that is generated in the process of growing and passaging the virus. the polymerase is generating polymorphism in each single virion, but this doesn't tell us how often we will actually /see/ a mutation, or detect it. it tells us only how often such a mutation is generated. Many such "errors" will result in a non functional virus, so called Defective Interfering Particles (DIPs). So when we want to assess how often the viral genome /detectably/ changes, we must sample the population over time and examine the overall diversity of sequences. and what you find if you do that in RNA viruses is that the smaller the quasi species population size, the slower the fixation rate. Because smaller virus quasi-species populations are less stable, so it takes longer to have a mutation stick around enough to become a minority variant and "fix" and even longer for it to become the predominant sequence. it helps to think about the virus in these passaging experiments as a sort of quasi species cloud, not mutating in one direction, but outwards. in all directions.

I also provide a pretty good slot machine analogy in my Reddit post along these same lines.

It may also be useful to know, this is why genetic drift in lab settings is often negligible, and why passaging experiments are so costly and laborious. Yes, your virus is mutating, but it isn't "fixing" mutations. To overcome this, you need as many possible animals as you can get, so that your have as many viral generations as possible, and also as genetically diverse an animal population as possible, so that you're providing consistent selection pressure. All so that you can try and counteract this drift problem. It quickly becomes a feasibility issue, and you realize that viruses mutate much faster in nature because they have way way more animals and transmission events to work with. I'm definitely/quite/ sure that you could not take RaTG-13 and make it into SARS-CoV-2 in 6 years. It stretches beyond the bounds of credulity.--Shibbolethink ( ) 01:00, 2 July 2021 (UTC)[reply]

Who said anything about RaTG-13? I am sure you are perfectly aware that WIV had (and may still have) quite a few SARS-like bat CoVs besides RaTG-13, and most of the data has not been released. Who knows what exactly Shi Zhengli was working on. She wouldn't have wanted to get scooped, so why would she have made anything available to anyone but maybe a collaborator?KristinaLu (talk) 01:56, 2 July 2021 (UTC)[reply]
In science, the best way to avoid being "scooped" is to publish information, not hide it. Leaving aside that little logical flaw, the rest of this "reasoning" is even worse. Who knows what exactly Shi Zhengli was working on she was working on space aliens, it must be aliens! You can't prove that she wasn't working on aliens! Maybe SARS-COV-2 is really an alien virus!!!11!!! Why does Wikipedia insist on censoring the alien virus hypothesis?

In all seriousness, do you actually do know what Shi was working on? Do you have any evidence that WIV or Shi had access to bat coronaviruses more closely related to SARS-COV-2 than RaTG-13? Because otherwise what are saying is no more or less verifiable than claiming that Shi was working on extraterrestrial viruses. Hyperion35 (talk) 20:31, 2 July 2021 (UTC)[reply]

I know, I know. All of this is such an unimaginable stretch for you... The idea that this bat virus emerged in a place with no bats, that just so happened to be the location of China's only level IV lab that just so happened to have the worlds largest collection of viruses... from bats. Only an unreasonable crazy person would ever imagine that there might be some connection there.
So here we have established that you can't snark, which is OK. As for the WIV, it is well documented that they were working with SARS-like bat CoVs before the outbreak of SARS-CoV-2. I can provide (their own) peer-reviewed sources but I haven't yet because I was under the impression that nobody here was contesting that fact.KristinaLu (talk) 08:24, 3 July 2021 (UTC)[reply]
The idea that this bat virus emerged in a place with no bats, that just so happened to be the location of China's only level IV lab that just so happened to have the worlds largest collection of viruses... from bats. It's worth remembering that we don't actually know that SARS-CoV-2 emerged in Wuhan. It was first noticed in Wuhan, and that was the location of one of the first big superspreading events, but we haven't identified the index case to say with certainty where it first infected humans. We do cover this topic in the article, by the way, explicitly pointing out the Wuhan/Yunnan distance. But the lab isn't the only explanation for that distance, of course. Bakkster Man (talk) 11:59, 4 July 2021 (UTC)[reply]
@Bakkster Man:Maybe I should make my position clear, since bias and retaining NPOV is always crucial on Wikipedia. The above that you quoted was sarcastic of course. It was in response to another editor referencing aliens in a post directed at me. My point was that calling hypotheses conspiracy theories can be just as silly and counterproductive as actual conspiracy theories themselves.
It's worth remembering that we don't actually know that SARS-CoV-2 emerged in Wuhan. Yes. That is indeed worth remembering. It is also worth remembering that transparency and open discussion are of primary importance to the scientific process (as I'm sure you realize).KristinaLu (talk) 18:38, 4 July 2021 (UTC)[reply]
@Hyperion35:No, you are incorrect that In science, the best way to avoid being "scooped" is to publish information, not hide it. That's a crude and inaccurate generalization. That's true when a lab is only interested in publishing the data it found, but not necessarily if they hope to do something with said data. It depends on the PI, some are extremely secretive, some less so. Take the situation where a research group "gets lucky" (or is in an unusually good position) and ends up having sole access to some data. If said data happens to be particularly useful (and especially if it's low-hanging fruit) in the same types of experiments that the research group specializes in, it might be years before said data is available to the public (which includes other researchers).
In the future please ask for clarification on what I write before assuming that my posts are "illogical" or "lack reasoning". Thanks!KristinaLu (talk) 20:32, 4 July 2021 (UTC)[reply]


For sources on any of the above, you can check out the Reddit post on my user page, where I provide inline citations. I'm also happy to try and explain this with a whiteboard sometime, it's a very confusing part of virology.

For example, really confusing point: quasi-species are only really relevant to RNA viruses in the lab setting, due to the much much much smaller virus population size. Once you get enough hosts together, neutral mutations stop mattering as much, the error threshold increases, and genetic drift becomes more relevant. here's one of the field-defining articles on this, from back in 2002 [41]. I link to a lot more stuff about this topic in my Reddit post. --Shibbolethink ( ) 01:35, 2 July 2021 (UTC)[reply]

all of the above is original research, but this seems a good time to remind everyone that WP:OR does not apply to talk space. I'm not arguing any of the above belongs in article space. not only because it's OR, like the rest of this thread (including most of the other comments in this section), but also because it's WP:UNDUE.--Shibbolethink ( ) 01:47, 2 July 2021 (UTC)[reply]

"Consensus among virologists"

What source describes the situation among virologists as a "consensus"? Adoring nanny (talk) 15:38, 19 June 2021 (UTC)[reply]

Here are 4 discussions on this very talk page about that:

Why not re-engage in any of those instead of making this new section? We want to avoid WP:BADGER, it becomes very time consuming.--Shibbolethink ( ) 16:55, 19 June 2021 (UTC)[reply]

Ok, re-engaged with the "fantically shoving" one. Adoring nanny (talk) 17:57, 19 June 2021 (UTC)[reply]
You're free, as ever, to present peer-reviewed journal articles which argue that the lab leak is more than unlikely or (to quote a recent one) "unnecessary to explain the pandemic". Until then, it's likely that this is just going to be a big time sink, especially if the quality of sources used to support the assertion that there is no consensus is nothing better than news reports. RandomCanadian (talk / contribs) 18:01, 19 June 2021 (UTC)[reply]
My source is the Nature ref you brought to the table. See the other section. Adoring nanny (talk) 21:50, 19 June 2021 (UTC)[reply]
@Adoring nanny: The Nature piece (this one, I presume) does not support that the lab leak is anything but a minority opinion. Here, clearly: "Most scientists say SARS-CoV-2 probably has a natural origin, and was transmitted from an animal to humans. However, a lab leak has not been ruled out, [...]". In addition, it's a "news explainer", not a peer-reviewed review paper, so while it is useful for many things, I don't see why we would use it to dispute a claim which it does not dispute, especially when we have a better source (such as the Frutos paper, quoted at a couple of places already) which makes the distinction quite clear enough... RandomCanadian (talk / contribs) 19:49, 20 June 2021 (UTC)[reply]
Just going through some other refs in the lead: A pneumonia outbreak associated with a new coronavirus of probable bat origin [42]. "Probable" is not a consensus. Similarly, Benvenuto [43]: "probably trasmitted from bats after mutation conferring ability to infect humans." Again, "probably". A statement that something is "probably" true is not the same as a statement that it is true . . . and is certainly not the same as a consensus that it is true. Adoring nanny (talk) 20:04, 20 June 2021 (UTC)[reply]
I think you may be confused about what the article currently says. All we ever say is that the lab theory is "unlikely" and that the natural zoonosis theory is "likely." We never say that one or the other is "true." The 'consensus' is the same, it's an agreement of probabilities. Not an agreement on what is "true" and what is "false." If you can find a place where we do say that, I would love to change it as well, because I agree that would be wrong.--Shibbolethink ( ) 14:32, 21 June 2021 (UTC)[reply]
I'm confused about how anyone can consider it unlikely. Dr. Redfield, one of the few people in the world to head a BSL-4 lab, has pretty much said the contrary, that it's not unusual for respiratory pathogens to infect the worker. In fact, we have proof of this from the original SARS leak from a Beijing lab, twice. It's only logical to assume if that virus had the transmission ability of this one, it very well could've caused a pandemic. Furthermore, if you look at the totality of events, from China's lack of transparency, lack of an intermediate host, the unusual prowess of the virus' transmission rate, and the fact that it started in a city with a lab that just so happened to be studying the exact species of virus that we know had a history of questionable safety protocols. It's almost against logic to dismiss the theory as "extremely unlikely", and continues to baffle me. Edit0r6781 (talk) 00:18, 24 June 2021 (UTC)[reply]
Hello! Our job at wikipedia is to summarize the best available sources, not to make our own calls on likelihood. THat's why we say "extremely unlikely." It's what the sources say. I would urge you to look at WP:5P and, in particular, WP:V. But welcome to wiki!--Shibbolethink ( ) 00:28, 24 June 2021 (UTC)[reply]
Edit0r6781 You might also want to take a look at this for an in-depth-but-not-technical-tone review of the subject. Also addresses the concerns about China: Both forms of the lab leak hypothesis share one element, namely constant finger pointing at the Chinese for being less than enthusiastic and cooperative about letting investigators into the Wuhan Institute of Virology to try to determine if a lab leak happened. This is, of course, not surprising and not in and of itself evidence for a lab leak. China is an authoritarian regime, and such regimes tend to be secretive. As for the fact it "started" in a city, that's dubious: see sources cited here under the "Wuhan was likely not the origin" bulletpoint). RandomCanadian (talk / contribs) 00:55, 24 June 2021 (UTC)[reply]
Wikipedia defines Scientific consensus as Consensus generally implies agreement of the supermajority, though not necessarily unanimity.. This means that in a survey of 100 scientists, if 51 agree on A and 49 agree on B, the phrase "most scientist agree on A" is TRUE but the phrase "there is consensus on A" is FALSE. Forich (talk) 19:40, 21 June 2021 (UTC)[reply]

Two kinds of laboratory leak? Confusion of terms

There are lots of sources recently talking about the origins of COVID. Media changes day by day, and I think people here have read sources, so I am not citing any particular source. I want to share my reading of the theories

  1. zoonosis / natural origin - the COVID virus came from an animal, perhaps a bat, which transmitted during a chance encounter to an unknown but typical person visiting the wilderness. That human then passed the virus on to other humans, starting the epidemic.
  2. laboratory leak, evil scientist engineers the virus - this is the conspiracy theory for which there are not reliable sources supporting, but which a lot of reliable sources name for the purpose of denying. It says that Chinese scientists working with the Illuminati artificially created the virus for complicated reasons.
  3. laboratory leak, zoonosis A virologist, perhaps in a Wuhan research laboratory, is studying COVID-19 and accidentally becomes infected by this natural virus perhaps by zoonosis. As COVID-19 is contagious, this scientist spreads the zoonotic, natural, non-engineered infection.

As I am looking at very popular media sources and the conversation on Wikipedia. I see sources in support of zoonotic origin, and I see sources and wiki conversation against "laboratory leak" but I think in context that means "leak of an engineered virus". Is there a distinction between "lab leak - mad science" versus "lab leak - zoonosis"? When sources are exploring laboratory leak, is my reading accurate that there are crazy and non-crazy lab leak theories, and that many media sources are themselves confused about distinguishing them? Or am I just confused? Blue Rasberry (talk) 18:17, 19 June 2021 (UTC)[reply]

I will share some sources, but there are so many more, and these are just examples but not representative. There is this paper
  • Bloom, Jesse D.; Chan, Yujia Alina; Baric, Ralph S.; Bjorkman, Pamela J.; Cobey, Sarah; Deverman, Benjamin E.; Fisman, David N.; Gupta, Ravindra; Iwasaki, Akiko; Lipsitch, Marc; Medzhitov, Ruslan; Neher, Richard A.; Nielsen, Rasmus; Patterson, Nick; Stearns, Tim; van Nimwegen, Erik; Worobey, Michael; Relman, David A. (2021-05-14). "Investigate the origins of COVID-19". Science. 372 (6543): 694.1–694. doi:10.1126/science.abj0016.
and this commentary from the lead author
In the original letter and the opinion piece a month later, the author still frames the issue as if a lab accident cannot be a zoonotic cause. To me, a scientist who for any reason contracts a zoonotic infection is still a zoonotic origin of disease. I do not mean to do original interpretation here, but I find it hard to understand the source material. Blue Rasberry (talk) 18:25, 19 June 2021 (UTC)[reply]
@Bluerasberry: There are some scientific sources which mention this. In the list here, a few make the explicit difference between the "engineered virus" nonsense and the "natural virus accidentally released". The most comprehensive is this recent review, (compare section 1.1 with 1.5), as well as of course the WHO report. Regarding misinformation, and politics, there is of course much confusion between the possible (but unlikely) and the bullshit scenario - this highlights the issue rather well, IMHO:

This matters for the lab-leak theory. A headline such as "Biden Orders Investigation into Wuhan Lab-Leak Theory" does not discriminate between the credible version of that theory and the conspiratorial version. The crucial differences between these two theories are therefore likely to be lost to a reader who – as many do – simply reads a headline and then shares the article.

Most scientific sources, however, seem to be in agreement that no. 1 of the three scenarios you identify is the most likely, and many recent papers seem to be exploring details about this. For example, the paper I added here talks about closely related strains found in bat samples, and many sources which I tried to make a census of (before losing motivation by being bombarded with the same kind of non-scientific sources which are good for politics but useless for science), here, also seem to give short shrift to the "it came via a lab" idea. This makes the argument that "Moreover, the notion that the SARS-CoV-2 pandemic resulted from a laboratory accident at the Wuhan Institute of Virology (Rogin, 2020) is not necessary to explain the pandemic." RandomCanadian (talk / contribs) 18:35, 19 June 2021 (UTC)[reply]
(edit conflict) An opinion letter isn't much of a source. RandomCanadian (talk / contribs) 18:35, 19 June 2021 (UTC)[reply]
@RandomCanadian: I took some of your sources from User:RandomCanadian/The_origins_of_COVID-19:_literature_review and processed them in meta:Wikicite for profiling in Scholia, both of which are projects I develop. Thanks for the response and research compilation. I was looking at your list and was unsure if all the sources you listed actually address COVID origins, because you have notes for some and not for others. Blue Rasberry (talk) 19:20, 19 June 2021 (UTC)[reply]
@Bluerasberry: As I said, I've checked some, but then I lost motivation. The profile on Scholia seems to not contain some important papers, including this one. RandomCanadian (talk / contribs) 19:28, 19 June 2021 (UTC)[reply]
@RandomCanadian: I added The proximal origin of SARS-CoV-2 (Q87830056). If I could more easily identify which papers have origin of COVID-19 (Q103224114) as main subject (P921) then I might tag more, but I will not ask you to take up a project you put down. Your documentation is interesting though, that must have taken a lot of effort. Blue Rasberry (talk) 19:42, 19 June 2021 (UTC)[reply]
@Bluerasberry: Thanks! The project is not abandoned (I do add new papers when I fall upon them), it's just on hold until I find more reason to put up the same kind of effort which led to its creation. As for doing this kind of thing, it's just a very standard keyword search strategy, as commonly employed in most forms of serious academic research (I had to do the same kind of thing, and document it quite thoroughly, for some musicology papers rather recently - the difference between searching for mendelssohn AND "organ sonata" on JSTOR and other databases and searching for covid AND origin on PubMed is not particularly substantial). RandomCanadian (talk / contribs) 22:10, 19 June 2021 (UTC)[reply]

Bluerasberry please can you add these PMIDs to your Wikicite project: 32786014, 33194988, 33200842, 33531884, 32773024, 33786037, 34046923, 33910809 and 34141073. CutePeach (talk) 10:54, 21 June 2021 (UTC)[reply]

@Bluerasberry: Don't. None of these are in credible journals as far as I can see (I haven't checked all of them, but the first few don't seem to), none of their authors are credible virologists, and they're all WP:PROFRINGE nonsense. @CP Why are you suggesting those when they've already been discussed multiple times on talk pages and dismissed? RandomCanadian (talk / contribs) 12:08, 21 June 2021 (UTC)[reply]
@RandomCanadian: please allow Bluerasberry to use his own critical thinking in selecting sources. You do not want to give him the impression that you WP:OWN this page. We are all WP:HERE to build this encyclopedia together. Tagging Loganmac [44]. CutePeach (talk) 08:58, 23 June 2021 (UTC)[reply]
Oh, come on. You and RandomCanadian are both telling Bluerasberry what to do. You said please, but RC gave reasons for the request. Don't pretend that RC's request takes away BR's choice or is in any way worse or more WP:OWNy than yours. --Hob Gadling (talk) 05:52, 24 June 2021 (UTC)[reply]

Early Chinese Virus sequencing deleted

This preprint has just been published: https://www.biorxiv.org/content/10.1101/2021.06.18.449051v1

It claims the Chinese deleted some of the original sequencing. Let's see what happens with the peer review but it's been shared widely by some prominent virologists.

If the original virus sequences from Wuhan were indeed deleted scientific consensus might change rather dramatically.

Also this preprint includes some interesting bibliography of cases predating the Wuhan Market outbreak. Not sure if those sources (including reputable sources such as the Lancet) are being included in origin related articles.

-- {{u|Gtoffoletto}}talk 13:29, 23 June 2021 (UTC)[reply]

Something to watch for in the future, if and only if this passes through peer review and gets published. Regarding the pre-December cases, even this paper only cites news sources. While we don't cite them on this article, we do at COVID-19 pandemic. Bakkster Man (talk) 14:41, 23 June 2021 (UTC)[reply]
"China deleted early coronavirus data that could help explain pandemic origins, researcher finds. Scientists say the findings are 'prima facie' evidence of China wanting to 'obfuscate' the potential source of the Covid-19 pandemic." https://www.telegraph.co.uk/global-health/science-and-disease/china-deleted-early-coronavirus-data-could-help-explain-pandemic/ SaltySaltyTears (talk) 16:17, 23 June 2021 (UTC)[reply]
The author of this article seem to be jumping to conclusions about this being evidence for a cover-up. While the sequence was apparently removed, the same sequence has been published as both a pre-print and in a peer-reviewed journal. The journal publication likely occurred after the request for removal. See below:

https://covid-19.conacyt.mx/jspui/handle/1000/4763

https://onlinelibrary.wiley.com/doi/full/10.1002/smll.202002169

Dhawk790 (talk) 21:14, 23 June 2021 (UTC)[reply]

Yeah... a juicy cover-up this does not make. Hanlon's razor applies.--Shibbolethink ( ) 21:28, 23 June 2021 (UTC)[reply]
Also, a relevant reminder that pre-prints are just "according to a new PDF". Bakkster Man (talk) 22:45, 23 June 2021 (UTC)[reply]
@Bakkster Man: Who doesn't love xkcd? I'm going to add the link to WP:PREPRINTS, because humour can help in getting the message across. RandomCanadian (talk / contribs) 22:47, 23 June 2021 (UTC)[reply]

@Bakkster Man: and @Shibbolethink: your comments somewhat deprecate one of the most highly respected scientists in the world right now. Jesse D. Bloom’s lab is widely followed for its work researching SARS-CoV-2’s evolution and potential immune escapes from vaccines [45] [46]. Also, since there was, is, and never will be any consensus that WP:MEDRS applies to covering all aspects of COVID-19 origins, I don’t see the problem with including Bloom’s opinions in any page or section where they are WP:DUE, citing good WP:RSs, and using WP:INTEXT attribution. As such, I am in agreement with Gtoffoletto and Ain92’s comments here and I think Drbogdan’s edit - citing the New York Times was a good contribution, so I ask you to consider restoring it. Pinging DGG, Ozzie10aaaa and WhatamIdoing for a WP:THIRD opinion.

@Dhawk790:, please send your potentially revelational findings to Jon Cohen of Science Magazine [47], Ewen Callaway of Nature Magazine [48], Alison Young of USA TODAY [49], Jennifer Rigby of the Daily Telegraph [50], Joel Achenbach of the Washington Post [51], Carl Zimmer of the New York Times [52], Amy Dockser Marcus of the Wall Street Journal [53], Simone McCarthy of the South China Morning Post [54], Grace Dean of Business Insider [55] and Manuel Ansede of El País [56]. If it can be verified that all the sequences deleted from the NIH and CNGB databases that Bloom managed to recover from those cloud drives - as reported in these reliable sources - match the sequences that you say were republished in journals, then it should be included in follow-up reports from our reliable sources, complete with retractions, clarifications and apologies. However, if you read any of the reliable sources I referenced above, you will quickly realise that your claim is false and should be struck. The data associated with the two papers you linked was removed and the authors haven’t responded to any requests for comment. CutePeach (talk) 10:01, 25 June 2021 (UTC)[reply]

I only went to the first article (the Science one) and it looks like this being accurately reported: "But critics of the preprint, posted yesterday on bioRxiv, say Bloom’s detective work is much ado about nothing, because the Chinese scientists later published the viral information in a different form, and the recovered sequences add little to what’s known about SARS-CoV-2’s origins." We need to have more patience about a lot of this stuff. There are plenty of other possibilities about why the sequence might have been deleted other than some sort of cover-up. Dhawk790 (talk) 12:09, 25 June 2021 (UTC)[reply]
+1 to the call for patience. This article will be much easier to write 10 years from now. This year's goal shouldn't be trying to chase after every will-o'-the-wisp the moment it appears in the news. WhatamIdoing (talk) 03:57, 26 June 2021 (UTC)[reply]
@CutePeach: your comments somewhat deprecate one of the most highly respected scientists in the world right now. Jesse D. Bloom’s lab is widely followed for its work researching SARS-CoV-2’s evolution and potential immune escapes from vaccines. Not only is this an appeal to authority fallacy, the policy recommending against using pre-prints applies entirely apart from the author's credibility (or lack thereof) and makes no suggestion to that extent. I do find it ironic that his article is red-linked (suggesting he's not all that notable).
Also, since there was, is, and never will be any consensus that WP:MEDRS applies to covering all aspects of COVID-19 origins... Strawman fallacy, the argument against inclusion isn't based on MEDRS. It's based on WP:PREPRINTS "Preprints... are not reliable sources" (along with parent WP:SCHOLARSHIP) and WP:NEWSORG "Scholarly sources and high-quality non-scholarly sources are generally better than news reports for academic topics". I'm sure you're not arguing this "highly respected scientist" is expressing a non-academic opinion via pre-print, are you?
I don’t see the problem with including Bloom’s opinions in any page or section where they are WP:DUE, citing good WP:RSs, and using WP:INTEXT attribution. His opinion is not notable, nor due. Definitely not the original wording (we'd need to make very clear that the claim is unsubstantiated, at which point why bother bringing it up just to debunk it?). Once it's peer reviewed that may change. Patience.
citing the New York Times was a good contribution, so I ask you to consider restoring it. Considered, but I'd make the same revert again per the above WP:PAGs. Easy call, IMO. If it's a solid claim, it's worth waiting for peer review. If it turns out it's in error, we'll be glad we didn't republish a single author's claims prior to the claims being reviewed by others. It's said "falsehood will fly from Maine to Georgia, while truth is pulling her boots on", we don't need to hasten its spread. Bakkster Man (talk) 13:34, 25 June 2021 (UTC)[reply]
Bakkster Man, I agree pre-prints should not be sources. And even once peer-reviewed and published, that paper is primary research, which WP:MEDRS generally rejects. The pre-print server reminds everyone it should not "be reported in the press as conclusive". We cannot report biomedical claims in that paper as though they were agreed fact. But the "Investigations into the origin of COVID-19" is largely an ongoing news story. And this claim has sparked significant news coverage, not least discussing the mix of opinions by scientists. I can't read The New York Times article (though I think Carl Zimmer is a respected science reporter), but can read the Washington Post and Science mag. Both of those discuss the scientific reaction to the claim. I see that CNN quote Bloom and two other scientists who are dismissive. In an wiki article on "investigations", then we need to, per WP:WEIGHT, describe these investigations. Scientist proposes something; other scientists pick holes in it or agree with it. This article isn't "The origin of Covid-19".
I strongly advise all sides to cool their language considerably, or else both will find blocks coming their way. This is a wiki, so the text that appears today can be changed or removed next week. So don't try to write it as though we were publishing a book that has to be absolutely correct. There's clearly a desire for this information to be up-to-date. We aren't writing an article about the causes of lung cancer, which we can say with some authority and knowledge that it won't change next month. So relax a bit. Find a way to cover this "missing data" story using the most reliable sources we have. Present it as part of the scientific investigation. When sources, as they do, claim this neither benefits or harms any side in the debate, then let's make that clear, rather than offering a statement that misleads the reader. If it turns out that in a month or two, nobody is the slightest bit interested in this missing data, and it is, as some suggest, not particularly significant or present elsewhere, then our coverage can be removed. The WP:WEIGHT given to these ongoing investigations is going to keep shifting. -- Colin°Talk 14:20, 25 June 2021 (UTC)[reply]
@Colin: There's two sides to this, as you point out: how we present it neutrally in the article, and the general notability of the claim. On the former, the edit I reverted lacked any suggestion of inconclusiveness or dispute. On 22 June 2021, 13 (or a total of 241) missing SARS-CoV-2 virus genetic sequences, apparently deleted from earlier virus databases for reasons not clearly understood, were reported to have now been uncovered in archival internet databases.
I reverted, rather than improving, because I simply don't believe this meets the notability threshold we've used for this article in the past. Same reason we don't mention Li-Meng Yan's discredited preprints, or early studies that appeared to identify antibodies in Europe in September 2019 (results which, to my knowledge, were never replicated despite an attempt by the WHO). And I don't think our preference to at least wait for peer review is out of line. I'd argue we should be preferring peer-reviewed secondary sources, so a peer-reviewed primary source is still arguably 'cutting edge' and the limits of what WP:PAGs permit.
If you still believe I've made an unacceptable (read: actionable under DS) comment above, please be more specific so I can redact and apologize. Bakkster Man (talk) 15:06, 25 June 2021 (UTC)[reply]
CutePeach just wanted to add in here that I actually have a huge respect for Dr. Bloom and his work. As it happens, he served as the outside examiner for the thesis defense of a friend of mine a few weeks ago. I've also followed his work with interest, especially the "mutagenic catastrophe" and "stochastic selection" stuff. He's a great scientist. That doesn't mean he's right about everything, though. And criticizing his preprint for making a mountain out of a mole hill is not "deprecat[ing]" him personally. Science thrives on criticism. I think Dr. Bloom is right about a lot of stuff, I also think he may be giving too much credence to DRASTIC team's work on this. But I will edit however the WP:RSes cover the events (in this case, scientific sources, as the news media often get this stuff wrong), and in due proportion to that coverage, regardless of what I personally think.
Colin, I would propose to you that we wait to see what the scientific sources say on this information. Given that it was put forth in a preprint. We don't want to start including stuff like this [57], just because news media are covering it [58]. (You'll note that article has been hugely updated, because it received a lot of criticism upon initial coverage (see here: [59]). That's what makes me say that we shouldn't cover this preprint before it gets published and other more scientific WP:RSes cover it. It's controversial and could create BLP issues, if a citation like this is used in any way to imply or say directly that Shi Zhingli or other WIV people have lied about their database. I think we all need to tread lightly, given that those BLP issues mean that the maxim in WP:V to report verifiable information, not "truthful" information is especially true here.
I think if there's still a great deal of disagreement and many editors think we should include this preprint in some way, then somebody (preferably the users who want to include it) should start an RfC. It's controversial, it deserves wider input. Please, don't make this more adversarial than it needs to be. Let's just work together to make these articles good.--Shibbolethink ( ) 15:45, 25 June 2021 (UTC)[reply]
Can you please not use escalating language, such as suggesting I have to find a criticism deserving of DS. The original text had problems I agree. I'm not particularly interested in a revert but more on whether you are willing to engage on this talk page to find a solution. Your original comments here focused on the pre-print source and if that was all there was to this, then that would be where this ends. But CutePeach found considerable news coverage of the scientific controversy. I mean, Nature Magazine wrote a decent length article on it.
I think you've got the wrong viewpoint when you think we need "peer reviewed secondary sources" to cover events. The "investigations into the origin of COVID-19" are a bunch of events. For sure, some of this article will need to make biomedical claims with whatever degree of confidence or speculation that sources permit. It may even mention biomedical claims that are discredited or rejected. A reason we require academic sources that have all these layers of checks (peer review, secondary sources, reputable publishers) is because this gives us confidence in biomedical facts. But the events here are not in dispute. A scientist really has reported such-and-such about data, and their publication is at a pre-print stage. This really has caused other scientists to voice their opinions publicly. This really has been widely reported in the press. The scientists really do agree on some things that have been claimed and really do disagree on other things. This is why I said folk need to stop reviewing sources here as though this article was "The origin of Covid-19" which would be mostly biomedical claims. This article is about the investigations, along with information about what is agreed and disagreed currently.
Some of these investigation steps will turn out to be dead ends, or even discredited perhaps. Some will bear fruit. Some will be irrelevant when examined in months to come. All we can do each day, is weigh what reliable sources are reporting about these investigations. And as far as I can see, reliable sources think this aspect has some weight today.
Remember this is a wiki. If we get the weight of this wrong, what's the consequence? If we can come up with a few sentences that cover what Nature and Science mag think worth reporting on, then it isn't like we'll be saying ridiculously untrue things about the origin. The very worst is we'll be accused of mentioning something unimportant. And that's easily fixable.
CutePeach, your argument that Bloom is a respected scientist and therefore we should give weight to his opinions isn't how it works here. We give weight based on that afforded by reliable sources. If we look at the quality journalism on this, Bloom's opinions are not be reported on as though they are correct and uncondested, and every one of them gives a voice to criticism. Stop looking at these things as evidence you are right. If you try really hard to be neutral, that will be a step towards agreements forming.
Shibbolethink, can you please not mention the RFC word. This isn't about "should include this preprint in some way". The preprint isn't a source and has no weight. Wrt "just because news media are covering it" ... well, I disagree, as I explained already. Agree fully that it needs to stop being adversarial, but it needs you guys do to that. -- Colin°Talk 15:51, 25 June 2021 (UTC)[reply]
@Colin: My apologies if the mention of DS came across as escalation. I simply intended that to be the broadest category of behavior for which I "will find blocks coming their way". I feel I was assertive, but not inappropriate. So I hope this clarifies, this is an earnest attempt to express that I absolutely would like to apologize and retract any statement if it has crossed a line. The articles are difficult enough to maintain, without my making it more difficult if I've done so inadvertantly.
I feel my edit history stands as strong evidence that I'm quite willing to work to improve article text when I feel a suggestion has validity, even if original wording was problematic. I'd suggest CutePeach would say similar, as they pinged me for input on a similar question at Talk:Peter Daszak#WP:RS linking Daszak with Wuhan lab and suggested addition. The difference here is that while I agreed the other article had a DUE addition with solid sources about an update to a WP:SCHOLARSHIP source, I feel this is an UNDUE addition of WP:PREPRINTS content which a rewording would not solve. While I try to perform neutral rewrites when possible, I can't think of one here that wouldn't end up making nearly everyone unhappy and thus don't think it would improve the article (and, by extension, the encyclopedia).
I strongly disagree with the interpretation of this article being a bunch of events which we can/should cover primarily through the general press. Along with the repeated mention of WP:BIOMED. I absolutely agree this is NOT a biomedical claim, however this is unambiguously an academic claim to which WP:SCHOLARSHIP applies. As I implied in my response to CutePeach, that the claim was made in a preprint marks it as scholarly. If it was merely the authors non-scholarly opinion, he would not have published it on biorXiv (see: Robert R. Redfield's comments in interviews, saying "I'm allowed to have opinions now" for an example of what a notable non-scholarly opinion looks like, something I previously added to this article's text as notable). To suggest it's merely opinion would implicate the author of an ethical violation by misusing a preprint server, to suggest it is academic means we can't apply WP:RS as if it were merely a notable event. For academic claims we need a better reason for inclusion (Scholarly sources and high-quality non-scholarly sources are generally better than news reports for academic topics - WP:NEWSORG), which I haven't seen presented yet. If you disagree, please present a rationale for why we should make an exception.
Remember this is a wiki. If we get the weight of this wrong, what's the consequence? If we can come up with a few sentences that cover what Nature and Science mag think worth reporting on, then it isn't like we'll be saying ridiculously untrue things about the origin. Two comments here.
  1. I agree, minimal consequence. This is why we're acting on WP:BRD, rather than suggesting consequences for anyone. Being WP:BOLD doesn't mean we are WP:RECKLESS.
  2. I welcome your suggestion of a few sentences which you feel would be appropriate. My earlier comments replied to a request to restore the original edit (based on what I believe to be a flawed policy argument), not to rewrite and improve NPOV/DUE.
All the best. Bakkster Man (talk) 16:40, 25 June 2021 (UTC)[reply]
The approach editors here have taken so far isn't working. Can we agree on that? An attempt to define everything to do with the origin of a disease as being under the remit of MEDRS failed. Both you and CutePeach said there needs to be more nuance to our consideration. Trying to determine WP:WEIGHT by one's own arguments isn't how it works. One says he's an eminent scientist. The other says it is just a PDF on some server. One points to the multitude of reliable journalism on the scientific squabble. The other points to a pre-print server that can be dismissed. Both of you are right but missing the point and arguing past each other. Policy says we can make this "somebody else's problem": what weight is given to it in reliable sources? And I think that approach of only discussing what reliable sources say is vital too for any editors with strong opinions on facts or strong political opinions about certain countries.
If this weekend you were to give a talk about investigations into the origins of Covid-19, you'd be sure you'd need to at least mention this "deletion" story or else someone will ask you about it. Similarly readers hearing about it elsewhere will come to Wikipedia to see what it says. Nature abhors a vacuum. Some of those readers will try to add the "missing" material using what they think are "reliable" sources. And it is random how reliable those will be and what agenda they will promote. They'd presumably then get their good faith edit deleted by someone. And they the will get accused of "censoring" Wikipedia. And we just keep arguing round and round.
So, I'm suggesting that editors propose some short text+sources that they think the other guys will accept. Rather than dismiss it with lectures containing lots of WP:CAPITAL_LETTERS, try to find something agreeable. Something your average reader of Nature or Science magazine would regard as fair and informative. Don't worry about it being relevant in a month or six month's time. You are editing an article on an ongoing series of current and recent events, so things are expected to change, and what was important this week may not be important next week. That is a different mindset to editing an article on something established.
By including some text on this scientific squabble, for now, you get a chance to shape what is said, and you get to resolve one point of conflict among editors. By refusing outright, you get to do neither. The last paragraph of this article makes a similar point. -- Colin°Talk 19:41, 25 June 2021 (UTC)[reply]
I get your arguments here, and agree broadly. As an aside, I hadn't seen that Science news article on this before, that passes the test for me that this is notable in the scientific community as well. If someone had already posted that here, my apologies.--Shibbolethink ( ) 20:03, 25 June 2021 (UTC)[reply]
Same here, I agree in principle. This is how I try to make most of my edits on the topic: rewrite if possible. But this is an outlier. I continue to disagree (and strongly) that it's notable enough to include, for the same reason I feel other pre-prints have not been notable enough to include. That said, here's my best stab at it, which seeing in text makes me feel even more confident that it's a tempest in a teapot which just doesn't belong here (though I'll obviously support a consensus which said it should be include it, I advise against it).
In June 2021, biologist Jesse Bloom published a preprint paper[a] identifying 50 SARS-CoV-2 sequences which had been withdrawn from the US National Institutes of Health Sequence Read Archive.[2] The NIH confirmed the data had been removed in June 2020 per standard practice at the request of the investigators who owned the rights to the sequences, under the rationale that the sequences had been submitted to another database.[3][1] Bloom claims his findings did not provide any insight into the nature of the spillover of SARS-CoV-2, but might provide additional evidence that the virus was circulating prior to the Huanan Seafood Wholesale Market outbreak.[1] Virologist David Robertson said that circulation prior to December 2020 was already well known by scientists, and that the paper doesn't support a conclusion of "a cover-up rather than a more mundane deletion of data."[4]
I'm not sure we can get this much shorter without losing necessary nuance. Adding the David Robertson opinion as a counterpoint feels reasonable to me given the discussion above if we're including Bloom's opinion. And at this length I continue to have some WP:DUE concerns (Undue weight can be given in several ways, including but not limited to depth of detail, quantity of text, prominence of placement, juxtaposition of statements and use of imagery., even though my NPOV concerns are alleviated. Though the thing I found weirdest in writing this is that Dr Bloom told multiple media outlets that this doesn't tell us anything about the virus' origin, suggesting he himself might not recommend the study be used in our article on Investigations into the origin of COVID-19.
Anyway, best effort text written, I still don't think it's suitable for the article. However, if consensus is against me, I'd suggest a new category for Independent Investigations between The Lancet COVID-19 Commission task force and International calls for investigations would be due (presuming nothing major changes in the state of the story). Bakkster Man (talk) 21:33, 25 June 2021 (UTC)[reply]
Bakkster Man, thanks for doing that. I'm impressed. Thanks especially for doing it despite your misgivings. What I'm suggesting, is that we could include that text today, even though some feel it is likely to prove to be an irrelevance, with the acceptance by all sides that it should be reviewed at some point in future (a month?). And if reliable sources are no longer mentioning this, then it is dropped. One website I read from time to time suggest this weekend that the deletion was "evidence of a cover up". By including the above text now, and for a short time perhaps, Wikipedia educates readers with NPOV. It is a win-win because those who think the deletion is important get something about it on Wikipedia. And those who disagree it is a cover-up get to point out how mundane it really is. A wiki allows easy come and easy go, particularly so for an article covering ongoing current affairs. Would you consider adding it? -- Colin°Talk 20:15, 26 June 2021 (UTC)[reply]
@Colin: I can appreciate that view, but I'd prefer at least one other person support that so we have at least mild consensus. I'm not a fan of doing something I think is counter to policy, just to keep some off-wiki conspiracy theorists satisfied. But as I said before, I'll take whatever consensus says we should do. Feel free to copy-paste to a new talk section for consensus if you think it's a good path forward. Bakkster Man (talk) 20:40, 26 June 2021 (UTC)[reply]
Preprints of scientific papers can be reliable sources: the free posted preprints of peer-reviewed accepted articles are essentially indistinguishable from the final versions except in typography. They only reason they're not official is a compromise forced on those promoting open access to avoid destroying the scientific journal publishing industry -- see our Open access for the details. Not only do we accept them, we actually prefer them--we include the links to the open access versions whenever they are available. Preprints that have never been formally accepted are a standard method of publication in many fields of science. But their authority depends upon the reputation of the scientist and institution publishing them. We normally use them, but say what they are. That doesn't mean we publish rumors. But there's a while range of reliability and usability that has to be considered. It also needs to be considered that peer-review and formal publication are not definitive evidence of quality--there have been many hoaxes and errors in the formal literation that I'm sure we're all aware of--and I'm sure everyone here who read peer-reviewed science looks to see not just where it was published, but who did the work and the analysis. . (And there have been official approval by the most reliable bodies of even therapies with no proven benefit, as in the 2021 approval of Aducanumab for Alzheimer's. Our general article on the disease needs tor reflect it; it's at present taking the arguments of the promotors at face value) ) Nothing in science is ever final. No publications is absolutely definitive. Hypotheses in the experimental sciences are never fully "proven"--they are always subject to change and correction from further research. (Indeed, one standard pseudo-argument of cranks who wish to denigrate true science is the fallacy that "it's only an hypothesis". One standard argument of that majority of the population who at least tries alternative remedies, even those of spectacularly unlikely nature, is that nothing in medicine is certain, as if anything could be). I can compare the attempt above to avoid taking account of the scientific research as it develops to those anti-vaxers who won't get the covid vaccine because it has only "preliminary approval". (I doubt they know that the "preliminary" data for at least some of the vaccines is very much better than the accepted data for the current used vaccines for influenza-- and better than most other vaccines in medicine; unfortunately, I doubt it would change their mind if they did know. ) True science uses the best data available, recognizing that it may be inadequate. All research is preliminary research, though the degree of confidence in it can vary.
There is a general misunderstanding here: we are not trying to establish the origin of Covid. It is of course extremely important that it be understood as definitively as possible, but that's original research, which is done elsewhere. WP just reports on the progress of science, as it happens. For important topics, WP has always covered not just on the final state, but the stages of the development of the knowledge.
And I suppose I should point out that the MEDRS requirements are designed to prevent the promotion of pseudo-medicine among the ignorant, by rejecting claims for unproven therapies under the principle that we wish to do no harm. That does not apply in this matter. Nothing about the prevention or therapy of this disease is affected by known how it originated. (The need for good research on this is much broader--it contributes to our ability to prevent similar diseases in the future. And the need for open discussion of this has a positive benefit, regardless of the conclusion--it has made everyone in the world more aware of the existence of laboratory accidents with dangerous biological agents, and also of the danger produced by not adopting measures that would control transmission from other animal species--and this is true regardless of which hypothesis is proven correct). DGG ( talk ) 00:54, 26 June 2021 (UTC)[reply]
No, a preprint is not the same as an accepted, awaiting publication. You're discussing "accepted, awaiting publication" - in which they are "essentially indistinguishable from the final versions except in typography". An accepted, awaiting publication paper has been through peer review, no scientific or other major changes are necessary, and you're correct that the only difference between that and the actual published online/print paper will be typography/stylistic changes. However, a pre-print has, by definition, not been through peer review yet - it is awaiting confirmation of the scientific and other logic in the paper. Sure, the paper may be stating what you consider to be true - but until the paper is actually accepted, it does not qualify as a reliable source - it's no better than an "op ed" at that point. By your definition, I could write up whatever I want in a "paper", submit it to a journal, then publish it as a preprint on a free repository (which is my right, as I maintain copyright to my journal articles even when submitting them for publication until such time as they are accepted). That "paper" I wrote, no matter what I say in it, would then be considered reliable by you simply because it's been submitted to a publication - even though it hasn't been peer reviewed yet and may fail peer review. This paper has a multitude of outcomes that are still equally likely - accepted, accepted with changes/clarifications (i.e. major changes to the science/logic in the paper), rejected, or rejected with prejudice (the difference being that rejection with prejudice means generally that the author cannot submit a similar paper again because of egregious errors/malfeasance). Any of these is possible as the peer review process at almost all journals is rigorous and will make corrections no matter how "minor" if it helps ensure accuracy and sound logic, or they may find so many errors that a few corrections can't solve it and reject it outright, and perhaps it will be resubmitted in the future with major changes. This is the reason preprints are not considered reliable - they're not yet "published in a reliable source" until they actually pass peer review. -bɜ:ʳkənhɪmez (User/say hi!) 01:27, 26 June 2021 (UTC)[reply]
Not only do we accept them, we actually prefer them--we include the links to the open access versions whenever they are available. This is a major misinterpretation of WP:PREPRINTS (which is policy). Please reread it. Bakkster Man (talk) 01:41, 26 June 2021 (UTC)[reply]
There's a long-standing consensus that preprints are not acceptable for anything COVID-related. Especially not when it involves a sensitive subject like this one. We're not a breaking news website, and we follow, not lead, the academic sources. So there's no harm done in waiting for proper reviews to come out about this, instead of making an unwarranted case that preprints are suddenly acceptable (no, they're not - anybody can put up anything in a preprint - compare with the infamous Yan papers). Common sense and WP:GOODRESEARCH favour using better sources if we have access to them, and that's definitively the case here, so there's no reason to use any kind of preprint. RandomCanadian (talk / contribs) 03:33, 26 June 2021 (UTC)[reply]
@DGG, Wikipedia:General sanctions/COVID-19#Application notes effectively banned the use of preprints for pandemic-related content. Although it's technically been superseded by the recent Wikipedia:Arbitration Committee/Discretionary sanctions, I don't think there is an expectation that the status of preprints has changed as a result. WhatamIdoing (talk) 04:05, 26 June 2021 (UTC)[reply]
@WhatamIdoing: I hadn't realized that was required under GS (though I'd certainly agree it's ideal). It might be good to get clarification on whether this restriction remains under DS. Bakkster Man (talk) 11:25, 26 June 2021 (UTC)[reply]
As others have pointed out, I think DGG has confused the draft that we often see on PubMed Central, which is essentially the final copy after editorial and peer review but still awaits a final proof read and layout tweaking for publication. The preprint here is a relatively new phenomenon and entirely unreviewed. I fully expect Ben Goldacre's late cat Henrietta has written and published a preprint on some database somewhere. Speculation about what MEDRS is "designed" to do, and therefore apparently limited in scope, is quite wrongheaded, unhelpful and not useful to resolve the problem. DGG, you were right when you said we aren't trying to say what the origin of covid definitely is (nobody knows) but if someone makes a biomedical claim about that origin, then MEDRS applies. What this article is about, is the investigations. And those investigations, the controversy, the progress and the misteps, are fair game. We need to find a balance between being a "breaking news website" as RandomCanadian fears we might, and being so far behind the curve as to be utterly irrelevant. Both sides need to try to move towards a middle ground. -- Colin°Talk 20:05, 26 June 2021 (UTC)[reply]
@Colin: I think it's more likely they mistook WP:PREPRINTS advice that they're acceptable as open-access after approval, and missed the explicit description as "not reliable". Bakkster Man (talk) 20:40, 26 June 2021 (UTC)[reply]
That "Application notes" section was largely illegitimate. The discussion that authorised it indicates editors weren't even sure what they were voting for; the one editor who asked the question was pretty much ignored. A 'consensus' where the proposer of a novel idea fails to clarify what they're even proposing, especially in a proposal that has never been enforced since its formation, can hardly be considered an active or valid consensus. But even if one considers it legitimate, in the abortion case when ArbCom took over the DS without the rest of the community's GS remedies, it had implicitly vacated the others, such as the 1RR (this was clarified in a 2020 ARCA I filed). Finally, an RS that decides to use a preprint as its base, and Wikipedia citing that RS, is not the same as citing to a preprint. ProcrastinatingReader (talk) 20:29, 26 June 2021 (UTC)[reply]
Good addition. This is the case when the claim has nothing to do with medicine. Hence WP:MEDRS does not apply. My very best wishes (talk) 21:24, 1 July 2021 (UTC)[reply]
What's the wikilink for 'suggesting people are leveraging a WP:PAG they've never mentioned applies to the discussion at hand'? Bakkster Man (talk) 21:34, 1 July 2021 (UTC)[reply]
I have no idea. But looking at citations in this segment, in particular article in Nature [60], I do see something interesting. It says The earliest viral sequences from Wuhan are from individuals linked to the city’s Huanan Seafood Market in December 2019, which was initially thought to be where the coronavirus first jumped from animals to people. But the seafood-market sequences are more distantly related to SARS-CoV-2’s closest relatives in bats — the most likely ultimate origin of the virus — than are later sequences, including one collected in the United States.. "SARS-CoV-2’s closest relatives in bats" I assume is RaTG13. That would be interesting indeed (i.e. the virus circulated in US represented an earlier version of the virus compare to one found in Wuhan market?), but looking at their article, I am not certain they proved this based on the sequence analysis. One must wait what reviewers say. As a side note, the COVID-19 of course did not originate from RaTG13 ("ultimate origin of the virus"). They had a common ancestor, unless it was completely cooked in a lab. My very best wishes (talk) 21:52, 1 July 2021 (UTC)[reply]

Why two discussions?

Can someone please cojoin the two discussions on this topic? It's too difficult for me to do as I’m on mobile and I am about to doze off after a long day at work. Please note that more discussions and indentations makes it harder for mobile editors. CutePeach (talk) 14:22, 28 June 2021 (UTC)[reply]

The wording for the WHO-China joint report

In the "Laboratory incident" section, I've reworded this sentence:

A final scenario, considered unlikely by most experts, and "extremely unlikely" by the World Health Organization...

as follows:

A final scenario, considered unlikely by most experts, and "extremely unlikely" by a joint report by WHO and China...

Yet the change was reverted.

I would suggest to use my wording, and not just "WHO".

We must indicate that the report was authored (in part) by Chinese authorities.

Firstly, because it's true. As per the report itself, it is a joint report by WHO and China, not just a WHO report.

Secondly, because there is an obvious conflict of interest here. As many sources mentioned on this page indicate, the Chinese gov is actively working on suppressing the idea that the virus escaped from a Chinese lab. Thus, we must be especially careful while using sources that are directly connected to the Chinese gov.

Calling it a "WHO report" would indicate that the report is a neutral source, which is misleading.

But (correctly) calling it a "joint report by WHO and China" would indicate a possible conflict of interest, which is the reality of the situation.

BTW, judging by the List of laboratory biosecurity incidents, such incidents happen on average every 3 (!) years (and every 6 months in the past 10 years). If some report calls such an incident "extremely unlikely", it is a strong indication that the report is biased. Compare: "A report XYZ says that a sunrise in the next 24 hours is extremely unlikely".

--Thereisnous (talk) 07:19, 24 June 2021 (UTC)[reply]

Disagree. Here are several reasons why:
1. The final report did not have input from the Chinese government, which is what is heavily heavily implied by that wording. The report was commissioned by the WHA and written by WHO affiliates, with input from Chinese scientists (as well as other countries, but to be fair mostly Chinese scientists). Chinese scientists collaborated on the study that forms the bulk of the evidence cited in the report. A fair depiction of the COI means explaining all of that. Why would you want to obscure that fact? We cannot make it sound like CCP officials had oversight or editing authority on the final report, because that was not the case.
2. Did Chinese people collaborate on the study? Yes! And it's important to reference that. Because that is a fair COI criticism, that we need more international involvement and unaffiliated involvement. Totally agree with you there. But I disagree that it's fair to call this report "authored but the Chinese government." Chinese scientists collaborated on the study. This is patently evident in the fact that the report is written grammatically from the point of view of "The WHO team." In the acknowledgments, each paragraph starts "WHO wishes to thank..." You can also tell because the Chinese scientists are cited in the acknowledgments, but not the authors of the report.
3. It isn't how reliable secondary sources refer to it. When the heads of state of a bunch of different countries criticized the report, they did so in reference to "the WHO convened study in China."[5] Here are several other secondary sources on how people discuss and refer to this report which demonstrate it is "WHO-convened" and operated in collaboration with China, which hosted the international team of visitors hand-picked by the WHO. Chinese scientists helped gather the data, helped author parts of the report, but the final say was from the WHO team.[6][7][8][9][10][11]
Sources

  1. ^ a b c "Seattle scientist digs up deleted coronavirus genetic data, adding fuel to the covid origin debate". Washington Post. Retrieved 25 June 2021.
  2. ^ Callaway, Ewen (2021-06-24). "Deleted coronavirus genome sequences trigger scientific intrigue". Nature. doi:10.1038/d41586-021-01731-3. Retrieved 25 June 2021.
  3. ^ "U.S. Confirms Removal of Wuhan Virus Sequences From Database". www.bloomberg.com. Retrieved 25 June 2021.
  4. ^ Dean, Grace. "A scientist says he's found 13 Wuhan coronavirus sequences that were deleted from a US database — and claims they're a 'goldmine' for research into the virus' origins". Business Insider. Retrieved 25 June 2021.
  5. ^ "Joint Statement on the WHO-Convened COVID-19 Origins Study". United States Department of State. Retrieved 24 June 2021.
  6. ^ Page, Drew Hinshaw, Betsy McKay and Jeremy (2021-05-25). "Inquiry Into Covid-19's Origins Splits U.S. and China". Wall Street Journal. Retrieved 24 June 2021.{{cite news}}: CS1 maint: multiple names: authors list (link)
  7. ^ "UK, US back 'timely, transparent' WHO-convened Covid-19 origins study - Times of India". The Times of India. 11 June 2021. Retrieved 24 June 2021.
  8. ^ "WHO chief asks China to cooperate with probe into origins of COVID-19". Business Standard India. 2021-06-13. Retrieved 24 June 2021.
  9. ^ Miller, Stephanie Nebehay, John (2021-03-31). "Data withheld from WHO team probing COVID-19 origins in China: Tedros". Reuters. Retrieved 24 June 2021.{{cite news}}: CS1 maint: multiple names: authors list (link)
  10. ^ "US urges WHO to carry out second phase of coronavirus origin study in China". South China Morning Post. 2021-05-28. Retrieved 24 June 2021.
  11. ^ Weintraub, Karen. "Five takeaways from the WHO's report on the origins of the pandemic". USA TODAY. Retrieved 24 June 2021.

--Shibbolethink ( ) 15:14, 24 June 2021 (UTC)[reply]

Btw, not to get into a protracted discussion on lab leaks, but your wording in those statements is also misleading. It's also an example of the Gambler's fallacy. Only some of those accidents resulted in human infections, and extremely extremely few actually result in outbreaks of disease in the general population. It would be more fair to ask "How often does a lab leak result in a general public outbreak?" and even then, it's not as relevant to say "What is the probability that this occurs, regardless of place, context, or time?" the more accurate question is "What is the probability this occurred in China in late 2019 in this lab with this virus, causing this outbreak?" It's akin to the difference between "what's the probability of someone winning the lottery?" (extremely high) versus "what's the probability of you, in particular, Thereisnous, winning the lottery?" (much lower).--Shibbolethink ( ) 15:01, 24 June 2021 (UTC)[reply]
I agree with Shibbolet's point, but I note that even if he were wrong, persistently referring to the report using "joint WHO-China report" is needlessly verbose and repetitive. The report, how it came to be, the actors involved, ... is already described in plenty of details. There are also plenty of sources, some of which I think have already been linked, which use simply "WHO report" or "WHO [something]". RandomCanadian (talk / contribs) 15:16, 24 June 2021 (UTC)[reply]
The report's acknowledgements are written by the WHO as an individual entity. That section also says that David W. FitzSimons edited the document. A google search with his name shows that he worked with the "External relations and Governance" Division of the WHO. In the "Methods of work" section, the report says "The final report describes the methods and results as presented by the Chinese team’s researchers. The findings are based on the information exchanged among the joint team, the extensive work undertaken in China in response to requests from the international team, including re-analysis or additional analysis of collected information, review of national and local governmental reports, discussions on control and prevention measures with national and local experts and response teams, and observations made and insights gained during site visits." So, it is a complex authorship structure in which the heavy work was done by the Chinese team's researchers, followed by observations and comments from the international team (we can't tell whether these observations were minor or major), followed by a formal editing and publishing, and posting as official position, on behalf of the WHO as an individual entity. In sum, I vote to use WHO-convened study in the first ocurrence followed by the use of the abreviatted WHO report or WHO study in all subsequent uses. Forich (talk) 21:07, 24 June 2021 (UTC)[reply]
'Joint WHO-China' report is its official name, other than being the most accurate and providing context. Not mentioning is highly inaccurate and misleading. Eccekevin (talk) 04:34, 25 June 2021 (UTC)[reply]
I agree, this is the official name and should be used. Which it is, currently, four times in the article. My only suggestion would be to reference it once near the top the World Health Organization section, which it used to be prior to recent rewrites giving more background to the process behind the report (a worthwhile addition, IMO, which also aims to address this topic of China's involvement). Bakkster Man (talk) 13:39, 25 June 2021 (UTC)[reply]
FWIW - I also agree that the official name, "Joint WHO-China" report, be presented - maybe a first-time "Joint WHO-China" (WHO-CH) report - and just "WHO-CH" report for all relevant instances afterwards (to help avoid being too "verbose and repetitive" as suggested earlier)? - iac - Stay Safe and Healthy !! - Drbogdan (talk) 15:42, 25 June 2021 (UTC)[reply]
Wait! Did I miss something? Since when is there a WHO-Switzerland report on this? Humour aside, no need for either abbreviations or repetition. Many sources refer to the report as the WHO report, and we should strive to use language which will be familiar to our readers and which is not needlessly verbose- especially given the presence of a complex enough section on the actual science, already. RandomCanadian (talk / contribs) 16:54, 25 June 2021 (UTC)[reply]
Even on the WHO website[[61]], it is referred to as the "Joint WHO-China study". I'm not sure why this would be controversial with other editors. Strong agree with referring to this report using similar language. Further, any time this report is used as a source it must be specified so that the reader is well aware.KristinaLu (talk) 02:26, 1 July 2021 (UTC)[reply]
KristinaLu, please check out the very detailed section of evidence and argument we have about this exact thing on this very talk page over here. This is a lot more complicated than simply one cursory mention on the WHO site. They also refer to it as the "WHO-convened global study" in several places. It is not so simple.--Shibbolethink ( ) 20:19, 2 July 2021 (UTC)[reply]


WHO-China report as a source

There are many sources that call this source into question. It should be avoided as a source whenever possible.KristinaLu (talk) 01:55, 1 July 2021 (UTC)[reply]

Edit: Care should be taken when using this source for contentious claims and the source should be named in the passage eg. "According to the WHO-convened study..."KristinaLu (talk) 02:43, 3 July 2021 (UTC)[reply]

It's WP:MEDRS. There really isn't anything to discuss here. –Novem Linguae (talk) 04:05, 1 July 2021 (UTC)[reply]
Here's the first sentence of WP:MEDRS:
"Biomedical information must be based on reliable, third-party published secondary sources, and must accurately reflect current knowledge."
The WHO-China report doesn't accurately reflect current knowledge. That's why the letter to Science is relevant.KristinaLu (talk) 19:35, 2 July 2021 (UTC)[reply]
Also, I should clarify my use of "whenever possible". Where the report makes non-contentious claims I see no issue whatsoever in using it as a secondary source. It should be pointed out however that the WHO-convened study is a primary source as well as a secondary one, we can see this in the "ANIMAL AND ENVIRONMENT STUDIES" portion where they have "Methods" and "Results" sections. It is not so simple as a literature review in how it needs to be handled here.KristinaLu (talk) 19:52, 2 July 2021 (UTC)[reply]
I think you're over-complicating this. One of the three types of MEDRS acceptable sources is medical guidelines and position statements from national or international expert bodies. Official reports by the WHO easily qualify. –Novem Linguae (talk) 07:31, 3 July 2021 (UTC)[reply]

The letter published in Science should suffice as evidence that the WHO-China should not be used as other sources are.[[62]]KristinaLu (talk) 02:43, 1 July 2021 (UTC)[reply]

Letters to the editor are not a very reliable source. I'd say it ranks pretty low on the totem pole. No peer review, and similar to a newspaper opinion piece. –Novem Linguae (talk) 04:08, 1 July 2021 (UTC)[reply]
This is the point where a sensible user would think, "Oh! It seems that I, with my handful of edits spread over the last two years, am not familiar enough with how to judge if something is a reliable source or not! It seems that I routinely mistake reliable sources for unreliable ones and vice versa! I should be more modest to better fit my rookie status!"
Can't we add big, fiery letters to the top of every lab leak Talk page which say: "before you post here, be aware that you are probably on the low end of experience with medical and scientific sources and the sources you suggest are very likely crap, while the sources you want to reject, which are used in the article, have very likely already been vetted and are immaculate. If you search the archives of the Talk page, you will very likely find several discussions about the very subject you want to talk about" or something like that? WP:RANDY has been relevant to this subject for months now. --Hob Gadling (talk) 14:19, 1 July 2021 (UTC)[reply]
@Hob Gadling:One could have experience with both reliable sources and scientific sources through, say, both graduate school and employment in labs working with pathogens. I would refer you to WP:NPA, but I'm not particularly insulted by someone calling me a "Wikipedia rookie".KristinaLu (talk) 19:15, 2 July 2021 (UTC)[reply]
@Hob Gadling:Perhaps I can't speak as a veteran Wikipedia editor, but in an academic setting, if a substantial number of experts have derided or criticized a particular source, one should question whether or not to use said source or at the very least name the source/authors whenever it is used. The mere fact that the source in question is for example published in a prestigious journal or funded by a major organization or even that it is a secondary source doesn't make it "immaculate". I would expect this convention to pertain to science related articles here as well.KristinaLu (talk) 19:28, 2 July 2021 (UTC)[reply]
@KristinaLu: Perhaps the issue is with limited experience with the policies and guidelines the encyclopedia is based on (WP:PAG). Of particular note reading between the lines: WP:NOR and WP:COI. Bakkster Man (talk) 19:34, 2 July 2021 (UTC)[reply]
KristinaLu, from one academician to another, I feel it is my duty to tell you that the gulf between what Wikipedia expects of its content and what academia expects is very large indeed.
There are parts of academic science which A) are better at this than wiki and parts which are B) much worse. There are very opinionated scientists and very neutral ones. There are scientists who write inflammatory subject matter reviews which would never work here. And there are ones who are much more careful than the best wiki editors at citing their sources.
But, overall, in both academic science and Wikipedia, the ultimate result is more than the sum of its parts. The peer-review process takes these inflammatory reviews and pours cold water on them. In areas of science described as "Hatfield and McCoy" feuds, continual back and forth from different camps in review articles and primary research will eventually give way to one or the other "view" of the field. As Max Planck said, science advances one funeral at a time.
Wikipedia, though, does have some assets that make it even better than academic science at its chosen goal. Scientific review articles aren't beholden to any policies like WP:DUE or WP:MEDRS, not formally anyway. That's something I really like about this place, and something it took me a really long time editing to understand. There's still a lot about it that I do not understand.
What is often told to PhD graduates at their defense? That old Socrates-ism? "What I have learned most is how much I do not know."
The same is true here. You, like me, may be an expert in your corner of science. You may be the world's foremost expert on solid state physics and its applications to Quantum computing for all I know. But here on wiki, humility is really important. Respect that you may be an expert in your field, but you are not an expert in how Wikipedia works.
My other suggestion would be to make policy-based arguments with evidence drawn from a combination of the policies themselves, the Reliable Sources in question, and examples drawn from other wiki articles. Arguments about your own knowledge of science, or, more pointedly, arguments drawn from conspiracy theorists like Deigin or Sirotkin....will not go very far around here.
I would tell you the best piece of advice I have ever learned is "figure out the precedent." Check out the extremely long and detailed archives of this talk page. You may find that the sources you've referenced, or the arguments you've made, have been made before. Read the gold standard WP:PAG like WP:NPOV (especially WP:DUE and WP:RSUW), WP:AGF, WP:MEDRS, WP:SCHOLARSHIP, and WP:V.
None of the above is to say that I have figured any of this out, but more to tell you that we are all still learning, and humility is key.
We need as many content experts as we can get, but they are not the only thing worth keeping around here. And being a content expert alone will not get you very far in terms of arguments. --Shibbolethink ( ) 20:08, 2 July 2021 (UTC)[reply]
Your personal view that Deigin and Sirotkin are conspiracy theorists is WP:OR and should not guide your or anyone else's edits here. I also wonder if you consider Ralph S. Baric or Robert R. Redfield to be "conspiracy theorists"?
Also, thanks for bringing up peer-review. As the joint WHO-China study is never went through the peer-review process, this should be considered as well.KristinaLu (talk) 20:38, 2 July 2021 (UTC)[reply]
KristinaLu, if I were you, I would read WP:STOPDIGGING. I am trying to help you, not engage in battlegrounding.
Many others have described these two as conspiracy theorists, it isn't just my opinion. For example: Angela Rasmussen [63] [64]
Also helps to know that Dan Sirotkin's highest qualification for knowing anything about science or medicine is that he was a janitor in a prison hospital for 4 months. Seriously, that's it. [65] Karl Sirotkin (his dad) used to be a big name in bioinformatics.
All of which to say, no I am not alone in thinking these two are conspiracy theorists. I'm not trying to say it in wiki-voice, mind you. And I don't think these two are even notable enough to be included anywhere on wiki. But my advice to you is not meant to start an argument. It's meant to show you how your arguments can be more effective.--Shibbolethink ( ) 20:59, 2 July 2021 (UTC)[reply]
  • An official report from a government agency based on a large international investigation is exactly the source that we need. You have not provided a policy-based reason for removing the WHO report, and in fact your sole reason appears to be that some other, non-peer-reviewed sources have disagreed with it. But these sources appear to be calling for more investigation. They do not appear to be directly contradicting the report. You have provided no evidence to indicate that the report is unreliable. You have not even demonstrated that you have sources that directly contradict it. Our rules and policies on sourcing say that the WHO Report is the highest quality, or one of the highest quality sources available. Hyperion35 (talk) 20:04, 2 July 2021 (UTC)[reply]
Exactly. Is it possible the WHO report is unreliable and/or out of date? Possibly. But the only source put forward to back that claim so far is... an opinion letter. Such a farcical claim doesn't help build credibility. Bakkster Man (talk) 20:10, 2 July 2021 (UTC)[reply]
Especially given how many other sources we have that are A) more current than both the letter and the report and B) confirm the assessment of the report.--Shibbolethink ( ) 20:14, 2 July 2021 (UTC)[reply]
The joint WHO-China report never went through peer-review. Environmeltal Chemistry Letters on the other is peer-reviewed:
"Content published in this journal is peer reviewed (Single Blind)."[[66]]KristinaLu (talk) 20:52, 2 July 2021 (UTC)[reply]
I'm not sure about Science, but all letters are also peer-reviewed in Nature:
"The following types of contribution to Nature Portfolio journals are peer-reviewed: Articles, Letters, Brief Communications, Matters Arising, Technical Reports, Analysis, Resources, Reviews, Perspectives and Insight articles."[[67]]
This appears to be the convention.KristinaLu (talk) 20:52, 2 July 2021 (UTC)[reply]
KristinaLu, I think you may be confusing "Letters" and "Letters to the Editor."
These are two different things. At Nature letters to the editor are actually called a "Correspondence." See their instructions for authors: [68] However, a letter to the editor about the need for further investigation, etc. would probably be instead solicited as a "Commentary." Also not peer reviewed, but more about topical disagreements about X, Y, or Z current event. Plus Correspondence can only have up to 6 authors I believe.
As for the other sources you've indicated, they are not reliable for questions about this content. See the other arguments made against those sources elsewhere on this talk page. It does not help you sway consensus towards your view if you just leave those unanswered and choose to ignore them. See WP:1AM.--Shibbolethink ( ) 21:09, 2 July 2021 (UTC)[reply]
@Hyperion35:
1) I never meant to say that the WHO-convened report be removed as a source altogether. If I gave that impression I apologize for the miscommunication. English is not always easy for me, especially when I'm tired. What we have in the joint WHO-China study is a non-peer-reviewed source that has undergone significant criticism by notable experts. The WHO-convened report is not exactly a secondary source either, as we can see where they have there own "Methods" and "Results" sections.
2) As to the veracity of the letter to Science to provide context for reliability of the WHO-China study: Some "Letters" in Science are peer-reviewed, according to their website. Whether or not this source was peer-reviewed appears to be an open question on this talk page. We can see however that Ralph S. Baric is one of the authors, and we of course know that Science is one of the world's top journals. Here is a secondary source in Nature documenting criticism of the WHO-Convened source [[69]]
3) The Segreto et al source[[70]] in Env Chem Lett is definitely peer-reviewed.[[71]] I am adding this source to show that the Science letter is not the only evidence suggesting that the WHO-convened report has problems. We also have this[[72]] published in the PNAS saying WHO-led efforts have been "cloaked in secrecy".
4) Surely the public statements by virologists Ralph S. Baric, David Baltimore and Robert R. Redfield (as well as microbiologist and medical professor David Relman [[73]]) need to be taken into consideration as to whether every single word in the joint WHO-China study be taken as gospel in this article. At the very least, I am arguing that whenever we have a claim which is argued by such experts that we a) source said claim in text specifically to the "WHO-convened report" and b) note the controversy as per WP:DUE. @Bakkster Man:I would like your take (as well as anyone else who wants to reply) on this last point as I am not particularly well-versed in the many WP:PAG.
Following advice from Shibbolethink as per WP:1AM and pinging @CutePeach: @My very best wishes: @Thucydides411: @Terjen: @Forich: @: @Pkeets: to see where other editors stand how the WHO-convened report should be handled as a source. The last thing I would want to do is argue for the sake of my own ego if there truly was a consensus against me.KristinaLu (talk) 23:34, 2 July 2021 (UTC)[reply]
It's a WP:CANVAS violation to ping selectively. my suggestion would be to ping everyone who has posted here or edited the article in the last 3 days or so. thanks.
EDIT: notifying every unpinged user who has contributed to this talk page and article in the last 72 hours: @Novem Linguae:, @Hyperion35:, @Hemiauchenia:, @ProcrastinatingReader:, @NightHeron:, @Adoring nanny:, @Thepigdog:, @Hob Gadling:, @HighInBC:, @Davemck:--Shibbolethink ( ) 01:17, 3 July 2021 (UTC) (Edited 12:52, 3 July 2021 (UTC))[reply]
Please note I am only involved in this page in an administrative capacity. Please do not include me in the content dispute. Thank you. HighInBC Need help? Just ask. 22:36, 3 July 2021 (UTC)[reply]
WP:CANVAS applies to "intention of influencing the outcome of a discussion in a particular way" so it doesn't apply here. I will look to page history for another couple editors to ping, thanks for the suggestion.KristinaLu (talk) 02:29, 3 July 2021 (UTC)[reply]
I'm confused what the question is. The report generally shouldn't be used as an inline citation because it's a primary source, but if other RS discuss it then it should be mentioned as those sources portray it. If this is about whether to call it the "WHO report" or the "WHO-China report" then I think it would be better to look towards the RS (ideally peer-reviewed journals, and if that's unavailable then long-style news reporting from HQRS) and call it whatever they do? ProcrastinatingReader (talk) 12:59, 3 July 2021 (UTC)[reply]
ProcrastinatingReader, Re: how to refer to the report, we already have that discussion. I would like to emphasize that, to the best of my knowledge, we do not cite the report in this article other than as a statement for how experts think about X thing (per MEDRS, and for uncontroversial statements which are also cited with other secondary sources.--Shibbolethink ( ) 13:03, 3 July 2021 (UTC)[reply]
So what's the question in this section? ProcrastinatingReader (talk) 13:08, 3 July 2021 (UTC)[reply]
ProcrastinatingReader, honestly unclear. I think this is a 10 minutes hate on the report. And I guess KristinaLu wants us to talk about the criticisms of the report every time we mention it or cite it. Which, imo, would be undue.--Shibbolethink ( ) 13:45, 3 July 2021 (UTC)[reply]
The issue with these discussions is that they're very unfocused and keep rehashing the same settled issues, such as the Segretto paper. It becomes very difficult to extract what specific issue is being discussed. ProcrastinatingReader (talk) 14:10, 3 July 2021 (UTC)[reply]
ProcrastinatingReader, Agreed. I am sometimes guilty of making this worse, as are many on this page, by discussing the topic instead of the article. I guess that often happens in contentious articles. As in all things, it's a work in progress. However, I have often wondered if an FAQ would help, as is sometimes seen on other heavily trafficked pages. But I also don't want to go too deep into that, as I'm quite sure it would be a long and drawn out and horribly convoluted discussion that would repeatedly get off track. Maybe it's worth it to avoid having as many of these discussions in the future. We also should just more frequently point to talk page archives when discussions are repeated. I think that would help.--Shibbolethink ( ) 14:43, 3 July 2021 (UTC)[reply]
A "Current Consensus" list, such as at Talk:Donald Trump or Talk:COVID-19, would be appropriate for the entire "Origins of COVID-19" I think. I've usually been critical about these lists, but these issues are split across so many talk pages and noticeboards and keep being rehashed that I think such a list would really help with institutional memory and dialing down the repetitiveness. ProcrastinatingReader (talk) 17:09, 3 July 2021 (UTC)[reply]
@Shibbolethink: I started Template:Origins of COVID-19 (current consensus). Feel free to add & improve it if it might be a useful concept. I don't have a list on hand of every disagreement but I found a couple major issues/discussions and added. ProcrastinatingReader (talk) 18:07, 3 July 2021 (UTC)[reply]
ProcrastinatingReader, Definitely! Like it so far, and will add more as I am able.--Shibbolethink ( ) 18:21, 3 July 2021 (UTC)[reply]
I have multiple concerns about the WHO-China report. The greatest is that raw data were not given to the international team,[74] and China has made it clear that raw data related to the origin of COVID-19 are to be treated like "a game of chess".[75] That's not an appropriate attitude for science. However, the issue is unlikely to be decided on this page. Adoring nanny (talk) 13:41, 3 July 2021 (UTC)[reply]

I went ahead and made sure that every place we have the report cited, it's either an extremely uncontroversial statement (e.g. which scientists were on the investigative team) or we have multiple other secondary sources to back up the claim. Does that resolve this?--Shibbolethink ( ) 13:45, 3 July 2021 (UTC)[reply]

No, but it's still an appropriate step to take, so thanks. Adoring nanny (talk) 14:47, 3 July 2021 (UTC)[reply]
Adoring nanny, Happy to help. What other specific unresolved concerns do you have? --Shibbolethink ( ) 15:01, 3 July 2021 (UTC)[reply]
To my knowledge, Wikipedia policies are not set up to handle a situation where the official opinion of a body like the WHO is based in part on data provided by someone who is playing games. Furthermore, the report itself shows no recognition of that fact. They did note that some data were not provided, but they didn't look at the big picture of why not. A scientist should be concerned with the integrity of their data, correct??? This is a new situation. But there is a fine line to tread. I think that rewriting policies for an unusual situation could be harmful. But I do think that, in the appropriate forum, we should have a community-wide discussion about what we think of the reliability of the WHO report. For example, should it be used to support WikiVoice statements or not? My personal answer is that the WHO report is not a scientific document. Garbage in, garbage out. But we need to ask the community. Adoring nanny (talk) 16:57, 3 July 2021 (UTC)[reply]
Adoring nanny, could you be more specific and less general? If you have concerns about wiki policy, my suggestion would be to take it to the talk page of that policy. But I agree that is not advisable at this time. Better to look into it and see how things age after this controversy calms down.
As far as I can tell, you don't have any specific concerns about how we currently use the report in this article, since it's only used for statements of non-controversial non-scientific fact and of summarizing expert opinion. But I may be wrong about that, please let me know. At present, I can't find any instances where it is used solely and strictly to support statements of science. Or if it is, it's because the report cites others that we also cite. In that capacity, the report is acting as a secondary source, bolstered by other peer-reviewed or otherwise robust RSes that we cite.
What specific statements do you have a problem with in the article text? I find that broad generalizations don't tend to be as productive as specific criticisms. Thank you--Shibbolethink ( ) 17:10, 3 July 2021 (UTC)[reply]
I don't think the WHO report is "garbage". I've only read portions of it, but it remains a report from the World Health Organization, which is an established and reputable body. However, it is a primary source, and thus falls under WP:MEDREV even if it were peer-reviewed. It also has to be remembered that this report is pretty much the only comprehensive scientific discussion on the origins. Media sources don't go into this level of depth, and other journal sources generally don't investigate the origins comprehensively, so it wouldn't be appropriate to cut the information out. It would be appropriate to use it to source uncontroversial statements in wikivoice, and controversial statements should be attributed in-text. ProcrastinatingReader (talk) 17:14, 3 July 2021 (UTC)[reply]
I guess what bugs me is the pattern of repeating debatable statements without any counterpoint. The example of this that jumps of the page for me is the following (actually not from the WHO): WIV virologist Shi Zhengli said in 2020 that, based on an evaluation of those serum samples, all staff tested negative for COVID-19 antibodies.[126] Sure, she said that, but she is forced to participate in Xi Jinping's chess game under the threat of being arrested and/or disappeared. Therefore, the evidentiary value of this statement is zero. But the article simply repeats the statement, without noting that she is speaking under threat. Maybe the article needs to discuss the fact that while everyone else is attempting to do science, the Chinese side is playing chess? Adoring nanny (talk) 20:08, 3 July 2021 (UTC)[reply]
Adoring nanny, your comment would be more appropriately placed in the sections below about Zhengli and your theorizing of her having a COI, instead of this section, which is about the WHO report.--Shibbolethink ( ) 20:12, 3 July 2021 (UTC)[reply]

@Shibbolethink:Thank you for the cleanup/organization that you did! @ProcrastinatingReader: said: I'm confused what the question is. The report generally shouldn't be used as an inline citation because it's a primary source, but if other RS discuss it then it should be mentioned as those sources portray it. If this is about whether to call it the "WHO report" or the "WHO-China report" then I think it would be better to look towards the RS (ideally peer-reviewed journals, and if that's unavailable then long-style news reporting from HQRS) and call it whatever they do?

@ProcrastinatingReader:I'll do my best to explain using an example. @Adoring nanny:Perhaps the following will address your concerns as well. The WHO report is used 16 times in the article. The fourth instance is the following highly contentious sentence:

Available scientific evidence and findings suggest that SARS-CoV-2 has a natural zoonotic origin.

This sentence has 4 inline citations. The first two are both the WHO-convened report. The third source which directly quotes the WHO-report is a correspondence piece, likely not peer reviewed as is the convention of the journal. The fourth source is an article. The most decicive claim in that article comes directly from the WHO report: This hypothesis has been considered as “extremely unlikely” by the official WHO investigation team. I propose the following resolution:

According to the WHO-convened report, available scientific evidence and findings suggest that SARS-CoV-2 has a natural zoonotic origin.

The above treatment of the source is how it would be most responsibly handled in an academic context, I can't speak for Wikipedia but I can't imagine why it would be any different in this case. The point is that if all we're dealing with here is one singular claim, it gives a false impression to the reader to have the claim with four inline citations as though all of those sources came to this conclusion independently. Adding the key language about where the claim comes from is both honest and clear. Thanks for reading. Thanks for reading.KristinaLu (talk) 17:16, 3 July 2021 (UTC)[reply]

KristinaLu, oh the issue there is that this is actually partially a transcluded statement from a different article. That's why you see multiple citations etc. I'll try and clean it up a bit, but that's why it's like that.--Shibbolethink ( ) 17:24, 3 July 2021 (UTC)[reply]
I can't help but wonder why you would engage in so much clean-up, rather than simply be transparent with the readers.KristinaLu (talk) 17:28, 3 July 2021 (UTC)[reply]
KristinaLu, ...huh? How exactly am I not being transparent? Please be more specific.--Shibbolethink ( ) 17:38, 3 July 2021 (UTC)[reply]
KristinaLu, Okay I've added some review articles and peer-reviewed research pubs to the citations for that statement, removed the commentary, and removed the WHO report from citing that statement. Every citation there firmly supports the article text.--Shibbolethink ( ) 17:52, 3 July 2021 (UTC)[reply]
I checked your first new source, the Wacharapluesadee et al. 1) Nothing in that article remotely resembles the sentence in question (so at the very least this is WP:SYN and 2) This is a primary source. Do I have to go over every one of your sources like this? Please don't edit in such a way (in haste or otherwise) that causes other editors to have to scan through jargon-filled primary sources behind a paywall just to find out that a claim isn't even supported. All I asked for is to attribute the claim to the source it came from. What we have now is WP:OR. Please change the sentence to say it comes from the WHO-report and call it a day.KristinaLu (talk) 18:30, 3 July 2021 (UTC)[reply]
Could you please not be adversarial? We are working together to build an encyclopedia, and you are not my employer, you don't even pass the 30/500 rule. You are a relatively new editor here who is very convinced they know better than quite a few editors with more experience. I would remind you, humility is a virtue in wiki. You raised an issue with the WHO source, so I found better sources. Primary sources may be used, with caution. Especially when a review paper backs up the assertions in the primary article. It's common practice to cite both for a controversial claim. So that's what I have done, and in fact provided several review sources that are also right there supporting the claim. That sentence is supported by the Wacharapluesadee source. The Wacharapluesadee source is peer-reviewed. It's published in a very well-regarded and reliable journal. But okay, because you have raised an issue with it, though I disagree, I will remove it. I went ahead and replaced it with a review published in a pretty well-regarded journal. Not as good as the others there, but pretty good.--Shibbolethink ( ) 18:52, 3 July 2021 (UTC)[reply]
KristinaLu, The reason there aren't more citations for that statement is that we have had too many at various points and wanted to avoid over-citing. But there are many more scientific peer reviewed sources (and journalistic RSes, which I'm not a fan of using in this context) which support the statement. I'll see if I can add some scientific literature sources and clean up that citation list. But no, it would be inappropriate in my opinion to make that statement attributed to the WHO report, since there are many excellent non-WHO sources which support it.--Shibbolethink ( ) 17:21, 3 July 2021 (UTC)[reply]
Here's another idea as opposed to using several primary sources (that would have to be thoroughly vetted to watch for WP:OR).
Just use this sentence:
According to the WHO-convened report, available scientific evidence and findings suggest that SARS-CoV-2 has a natural zoonotic origin.
Cite with secondary sources. Done. Please consider editing in such a way that makes Wikipedia transparent, accessible to non-expert editors, and free of WP:OR (including WP:SYNKristinaLu (talk) 21:27, 3 July 2021 (UTC)[reply]
Could you please indicate which sources that are currently cited for the sentence are "primary" ? or contribute to WP:OR? I think it's probably useful also to say that every single currently cited source for the sentence is open access. No paywalls.--Shibbolethink ( ) 21:40, 3 July 2021 (UTC)[reply]
Additionally, I would direct you to the following explanatory supplements to WP:OR -- SYNTH is not summary, SYNTH is not important per se, and SYNTH is not explanation. I would ask that if you would like to criticize one of my edits as SNYTH, please in the future provide which two (or more) ideas I am combining to create a new thesis. I will then gladly either A) provide you quotes to show I am not doing WP:OR, or B) agree with you and self-revert or change my edits so that they are not OR. This will save us both a lot of time and headache. Thank you. --Shibbolethink ( ) 22:20, 3 July 2021 (UTC)[reply]
@Shibbolethink:[>This edit here.]. When you added the Wacharapluesadee et al source. Were it a stand alone source, it constitutes WP:OR as far as I can tell. And yes, you removed the article but of course only after I complained about it. Technically, if I added the King James Bible to the list of citations would that be WP:OR? Maybe not if the content was covered in other sources but it makes everything an impossible task for other editors. Other editors shouldn't have to vet primary sources in this way, especially when there is a perfectly reasonable solution that has already been suggested. No time at the moment to check the other sources. Hopefully another editor can. (Also, you're right I forgot about the paywall thing.)KristinaLu (talk) 22:50, 3 July 2021 (UTC)[reply]
@KristinaLu: The reason I directed you to "SYNTH is not important per se" is because it is particularly relevant here. "What matters is that all material in Wikipedia is verifiable, not that it's actually verified. By this we mean that it is important that a suitable reliable source that supports this material has been published in the real world, not that someone has gotten around to typing up a specific bibliographic citation in the article. Citations are not an end in themselves." Now typically for controversial statements, it's important to have citations, because otherwise they will get challenged and removed. But there's no WP:PAG that says "because you added a source somebody disagreed with one time, the entire statement must be removed, you aren't allowed to keep it with good sources." At least not one I've ever heard of. The importance of the project is to have encyclopedic verifiable information. And that means saving statements that are verifiable, even if the source isn't right at the moment. In practice, that means it's okay to revert an added sentence and say in the edit summary "source doesn't support, provide good quality source" and then when somebody comes back and re-adds the sentence with a good source, that's also okay. That's just the process in action. Wikipedia is not about winning, it's about making a good encyclopedia.--Shibbolethink ( ) 23:52, 3 July 2021 (UTC)[reply]

WHO-China report as a source, cont.

Creating a break here.KristinaLu (talk) 22:52, 3 July 2021 (UTC)[reply]

My crude attempt at a synopsis of what was discussed above:

The reliability of the WHO-convened report (this is the name that was agreed to, right?) has been called into question by experts as well as by the international community. We have talked about how to treat all contentious claims (made in this article) which are currently sourced to the report by treating them in one of the three following ways:

1)Introduce wording such as "According to the WHO-convened report..."
2)Replace with other RSs if all of the other peer-reviewed and other RSs agree and I would argue generally that they do not, otherwise the claim would not be contentious
3)Delete said material.

Looking forward to what the community has to say.KristinaLu (talk) 23:01, 3 July 2021 (UTC)[reply]

KristinaLu, Your option 2 does not make sense with WP:DUE and WP:FRINGE.
It doesn't matter if one or two sources from unqualified non-experts say A, when the majority of available HQRSes (peer-reviewed review articles in topic-relevant and well-regarded journals) say B.
We don't elevate viewpoint A to a worthwhile inclusion in the article if most available secondary sources don't even mention it. We treat A with due weight, which to a WP:FRINGE or extremely minority viewpoint, is to say we do not mention it. And we certainly do not just delete B because A exists. For instance, Deigin and Segretto's viewpoint can be understood as fringe when we examine the fact that no HQRSes even mention the existence of their paper.
So instead we include the statement B as supported by HQRSes, with due weight to the mention of B in available HQRSes. We do not include minority viewpoints just because they exist, only if they are mentioned by others as notable and worth giving minority weight.
For scientific claims, the relevant guideline on what counts as a HQRS is WP:SCHOLARSHIP. This would tell us that we defer to scientific review articles in topic-relevant and widely-circulated journals. They determine the weight we give viewpoints.
You also left out Option 4) Adjust the statement until it is compatible with what secondary RSes say, ignoring the WHO report altogether.--Shibbolethink ( ) 23:42, 3 July 2021 (UTC)[reply]
I addressed a similar issue as the one raise by KristinaLu in this [[76]] discussion, abruptly closed without consensus. I believe it has aged well because other editors and readers have pending concerns on the reliability of the report. I propose we revisit the discussion at RSN if evidence keeps mounting up against the report' credibility. Forich (talk) 23:52, 3 July 2021 (UTC)[reply]
Forich, why does the credibility of the report matter if we don't use it to make statements of controversial unattributed fact? And if we also discuss the many pitfalls and concerns that have been expressed with the report in the appropriate sections with the appropriate weight? (which I believe we already do)--Shibbolethink ( ) 23:59, 3 July 2021 (UTC)[reply]
@Forich: [I see.] Your post did indeed age well. What a curious move it was to close that conversation. I should be clear here; to me what is at issue are the contentious claims made in the WHO-China report. On the other hand, what is conspicuously missing at key points in this article is the fact that the WHO study came up short on all of the investigations they did do (ie. found nothing at the market, found no reservoir species, found no link to frozen foods, etc.). The report could be useful (along with secondary sources of course) to illustrate that point. Well, I would gladly be willing to help compile a list some of the developments that have happened since then.
Here are four names that come to mind: Ralph S. Baric David Baltimore Robert R. Redfield David Relman
KristinaLu (talk) 01:03, 4 July 2021 (UTC)[reply]
@Shibbolethink:, If the WHO did not wanted journalists and wikipedians to discuss the extent of credibility of its origin report they should not have endorsed the flawed version that came out. I have no responsibility in that, I'm just calling it out. Authority is not perennial, that's why we regularly bring hot topics to Reliable Sources Noticeboard. It took Wikipedia five years to realize that CGTN was not very reliable on some topics (it was launched in 2016 and only by 2021 user Hemiauchenia raised concerns about it, see this thread. In the case of Xinhua News, editors soon advocated for some filter (e.g. User Peregrine Fisher said Xinhua is a reliable source. Just be careful if your using them for something that the PRC would want slanted.. I hope that a proper discussion would eventually lead us to some filter of the sort of: do not trust a WHO-report that repeats political statements about Taiwan's sovereignity, or do not trust a WHO-report that repeats COVID-19 death figures that have been shown to be statistically unrealistical, or do not trust a WHO-report that repeats Chinese claims that frozen foods is more likely than a lab leak origin. These are just arbitrary examples to show that some narrow areas of distrust can be drawn. And maybe I am wrong on all of them, I just don't want the discussion to be closed within 24 hours with an explanation of "its political nonsense". Forich (talk) 03:48, 4 July 2021 (UTC)[reply]
Forich, What specific changes would you like to achieve consensus on? This feels like more arguing in a ten minutes hate about the report. We cover many criticisms against it, from several different people. We also cite it only for where expert opinion is being referenced, as it is a professional body of experts. It's not our job to WP:RIGHTGREATWRONGS, or somehow depict the "true" nature of reality. it's our job to depict the world through the lens of verifiability and using the best available sources. So please explain, how are we not doing that in the current article text?--Shibbolethink ( ) 03:54, 4 July 2021 (UTC)[reply]
I've made specific diffs that have been reverted:
  1. strongly questioned adjective
  2. Reuters and CNN deserve to be cited
  3. not seen as credibly adjective
  4. A new point is this specific point on the hierarchy wikivoice -> MEDRS -> RS: I propose we prevent to put in wikivoice anything that is seen to be influenced by the documented Chinese control of information that could have transpired into the report (if it can not be substantiated by a second source). Examples: a laboratory origin of the pandemic was considered to be extremely unlikely (p. 120), / Transmission within the wider community in December could account for cases not associated with the Huanan market which, together with the presence of early cases not associated with that market, could suggest that the Huanan market was not the original source of the outbreak (p. 7), / introduction through cold/ food chain products is considered a possible pathway (p. 9.
This four points are specific, have made them before (at least the first 3, including justification on talk page). These edits got watered-down to the current paragraph that has upfront that Tedros "called for more studies" with a timid "Doubts over the report were also echoed by some media commentators". I propose to change the balance, by putting less weight on Tedros call for more studies and more weight on the lack of credibility cited in RS. Forich (talk) 05:35, 4 July 2021 (UTC)[reply]
Forich, point by point:
1. My gut reaction is "not NPOV" and particularly WP:UNDUE since we already have your 30 scientists, the WSJ investigation, and multiple multiple politicians and scientists criticizing it in the article. I don't think this one particular sentence adds much of anything. In the current article, we actually describe the criticisms and who has said them, instead of making broadly uncitable pronouncements. I also don't think your citations actually support the statement you've attached them to, particularly the White House citation and the Reuters citation do not say that. The New York Times article supports what we already have in the article text: criticisms about transparency and access to samples/raw data. The Atlantic article does not even refer to the WHO-convened report on COVID's origins, instead referring to the Joint Mission that examined transmission dynamics and how to control the spread of disease [77]. Totally different report, I've made that mistake myself. I believe you've accidentally synthesized "China withheld data" and "WHO said the virus was likely zoonotic" to produce the WP:SYNTH "credibility has been questioned due to a "proclivity to side with China." I don't see that thesis anywhere in those citations, except from Matt Ridley as an opinion. And I can't find other citations talking about this Ridley piece, so I think including it even as an opinion of his would be undue. The Telegraph is well known for its very very opinionated bend towards conservatism. Ridley also has no relevant expertise other than having written some books about genetics (which I greatly enjoyed). He has no formal training in virology or epidemiology or international relations, though, and for that reason we should not cite it as even an expert opinion.
2. not NPOV, there are already a ton of references in NPOV language, why add the one quote that is a paraphrase of a paraphrase? We've already cited 30 scientists and a ton of other individual experts. Quickly becomes a race to win king of the COATRACK.
3. Of these 4, this is the one I am most sympathetic to. It's a good source, with a good non-picked quote. However, that being said, we already have specific people questioning credibility, and also joint statements, individuals, countries, scientists, and the WSJ questioning the credibility, plus others I have definitely forgotten. This very quickly becomes a WP:COATRACK where the end result is "let's put as much negative criticism as we can find here" instead of "let's duly weight the criticism in proportion to its actual coverage in the secondary sources." We need to be very careful about that tendency, I have felt it myself. I could be convinced on this one, but overall I am pretty confident it's UNDUE.
4. This is again an opinion-based argument, that has no bearing on MEDRS or statements from an expert body. If the American Heart Association all got together and made a statement, "Jumping off bridges is actually good for your heart health," then we would duly report that very statement as an attributed expert opinion. It's important to include because it's an expert body making a claim, and a claim that is covered extensively by secondary sources, showing that our depiction of it is also WP:DUE. We may not like that claim, we may find it troublesome, but that isn't what matters. It doesn't matter how much Reuters says "The AHA has been taken over by aliens!" It doesn't matter how much Matt Ridley doesn't like it.
Bungee jumping is in season, or rather, "The AHA has decided that bungee jumping is in season."--Shibbolethink ( ) 06:35, 4 July 2021 (UTC)[reply]

We made the news!

Blue Rasberry (talk) 20:29, 24 June 2021 (UTC)[reply]

Great read. Thanks for mentioning. Courtesy ping to the folks mentioned by name in the article: @Forich, L235, Alexbrn, Colin, and Jimbo Wales:. –Novem Linguae (talk) 20:51, 24 June 2021 (UTC)[reply]
While they used my sock puppet picture (which is fine) I should note I was contacted by the journalist for an interview and declined. But the piece seems broadly fine. Alexbrn (talk) 20:59, 24 June 2021 (UTC)[reply]
Always a good technique Alexbrn. I have great respect for journalists, but yeah I also would have declined if I were you. I only agree to interviews when I can respond to direct questions in text form, and if I can see the final version of the article and decline to participate if I believe I've been misconstrued. A lot of journalists will say no to that, but some will say yes.--Shibbolethink ( ) 23:29, 24 June 2021 (UTC)[reply]
Wow, great to see our work being covered in the news! Congratz to all the hard-working editors who have participated in the discussions reviewed in the article. Jackson Ryan is the name of the journalist who wrote the piece, he did a very good job I think Forich (talk) 21:23, 24 June 2021 (UTC)[reply]
I've got a few minor complaints (didn't really mention this article, was basically limited to Pandemic main article and the deleted POV-fork), but overall complimentary and recognizes that it's a difficult task no matter what the answer. Bakkster Man (talk) 22:19, 24 June 2021 (UTC)[reply]
It is rare to read an article about Wikipedia that gets things broadly right. Nobody contacted me, despite being mentioned. It looks like Forich got interviewed, and for getting such Wikipedia-positive quotes, surely deserves an "I edit Wikipedia" t-shirt from WMF :-). -- Colin°Talk 07:55, 25 June 2021 (UTC)[reply]

Great article. I wonder who these "socks" and "state actors" are. Could it be that Alexbrn is an MI6 sock covering up yet another foiled plot of the British royal family? Why was Prince Harry and his dad James Hewitt in Wuhan for the military games? What are they hiding? CutePeach (talk) 08:55, 25 June 2021 (UTC)[reply]

lol RandomCanadian, I believe CP was making what the kids are calling a "joke." --Shibbolethink ( ) 12:03, 25 June 2021 (UTC)[reply]

RfC: How should we refer to the report on SARS-COV-2 origins?

RfC withdrawn because it's a WP:SNOWBALL in favor of option B (WHO-convened report/study) as first use per-section, with a slightly more abbreviated "WHO report/study" thereafter. I'm withdrawing because these articles are so contentious and discussions tend to devolve, and I think it's good to recognize a very clear consensus when it exists. If anyone thinks I called this one the wrong way, or wants me to re-open, absolutely I will, just let me know. But otherwise I'm withdrawing and leaving this open so as not to ruffle any feathers unnecessarily. Deal? Deal.--Shibbolethink ( ) 00:41, 30 June 2021 (UTC)[reply]


Throughout this article, we often refer to a report published by the WHO about the origins of SARS-COV-2 [78].

The basic question of this RfC is: How should we refer to this report?

This is a more complicated question than it might seem at first glance, and I encourage all editors to read the evidence presented below these options before weighing in.

Here are the options as I see them:

  • A: Refer to it as the "Joint WHO-China study" in the lead and then explain the process of how the study/report came to be, who was involved in what capacity, etc.
  • B: Refer to it as the "WHO-convened study" in the lead and then explain the process of how the study/report came to be, who was involved in what capacity, etc.
  • C: A mix between A and B where we refer to the study/report throughout the article switching off between the two names, with the first usage being "Joint WHO-China study."
  • D: Variant of C where we switch off, but the first usage is "WHO-convened study."
  • E: We scrap this dispute altogether and use novel language such as "WHO-convened study conducted jointly with China" or "joint study convened by the WHO and conducted with China."

RfC prepared 18:31, 25 June 2021 (UTC) by Shibbolethink ( ) (updated 19:01, 25 June 2021 (UTC))[reply]

Evidence

Here are the relevant questions and data:

  • What name do news agencies use?
News agencies

Use some form of "Joint WHO-China study":

CNBC,[1] The Economist,[2] Voice of America,[3] Vice News[4]


Use some form of "WHO study" or refer to WHO as the sole author of the report:

BBC,[5] Bloomberg,[6] Fox News,[7] The Guardian,[8]Newsweek,[9] Politico,[10] Times of India,[11] USA Today,[12] Wall Street Journal,[13] Washington Post[14]


Use a mix of the two:

ABC News,[15] Ars Technica,[16] Associated Press,[17] MIT Technology Review,[18] NBC News,[19] NPR,[20] Denver Gazette,[21] New York Times,[22] Reuters[23]


Sources

  1. ^ "Draft of joint WHO-China study says animals likely source of Covid". CNBC. 2021-03-29. Retrieved 25 June 2021.
  2. ^ "A joint WHO-China study of covid-19's origins leaves much unclear". The Economist. 2021-04-03. Retrieved 25 June 2021.
  3. ^ "COVID 'Likely' Transmitted from Bats to Humans Through Other Animals, Study Reveals Voice of America - English". www.voanews.com. Retrieved 25 June 2021.
  4. ^ "We Finally Know What Was Sold in Wuhan's Markets Before the Pandemic". www.vice.com. Retrieved 25 June 2021.
  5. ^ 3 articles with simply "WHO investigation" or "WHO report":
    1. "US urges 'transparent' WHO inquiry into Covid origins". BBC News. 2021-05-25.
    2. "Covid origin: Why the Wuhan lab-leak theory is being taken seriously". BBC News. 2021-05-27.
    3. "Coronavirus: More work needed to rule out China lab leak theory says WHO". BBC News. 2021-03-31.
    And 1 article with 1 instance of mixed-usage:
    1. "WHO Covid report leaves many stones unturned". BBC News. 2021-04-01.
  6. ^ "U.S. Gets Crucial EU Support for New Study Into Covid's Origins". www.bloomberg.com. Retrieved 25 June 2021.
  7. ^ Hein, Alexandria (2021-03-30). "WHO report on COVID-19 origin inconclusive, calls for further studies". Fox News. Retrieved 25 June 2021.
  8. ^
  9. ^ Fink, Jenni (2021-05-14). "18 scientists, including one who worked with Wuhan lab, say COVID lab leak theory needs study". Newsweek. Retrieved 25 June 2021.
  10. ^ Ward, Myah. "G-7 nations call for thorough probe of Covid origins in China". POLITICO. Retrieved 25 June 2021.
  11. ^ "WHO-convened study on Covid-19 origins 'an important step': MEA India News - Times of India". The Times of India. Retrieved 25 June 2021.
  12. ^ "Here's the biggest news you missed this weekend". USA TODAY. Retrieved 25 June 2021.
  13. ^ Hinshaw, Drew; Page, Jeremy; McKay, Betsy (2021-03-17). "How the WHO's Hunt for Covid's Origins Stumbled in China". Wall Street Journal. Retrieved 25 June 2021.
  14. ^ "Seattle scientist digs up deleted coronavirus genetic data, adding fuel to the covid origin debate". Washington Post. Retrieved 25 June 2021.
  15. ^ "AP Exclusive: WHO report says animals likely source of COVID". ABC News. Retrieved 25 June 2021.
  16. ^ Mole, Beth (2021-03-05). "Under intense pressure, WHO skips summary report on coronavirus origin". Ars Technica. Retrieved 25 June 2021.
  17. ^ "WHO report: COVID likely 1st jumped into humans from animals". AP NEWS. 2021-04-20. Retrieved 25 June 2021.
  18. ^ "No one can find the animal that gave people covid-19". MIT Technology Review. Retrieved 25 June 2021.
  19. ^ Welker, Kristen; Gregorian, Dareh. "China's stonewalling pushed Biden to reveal latest intelligency probe of Covid origins". NBC News. Retrieved 25 June 2021.
  20. ^ "Unproven Lab Leak Theory Brings Pressure On China To Share Info. But It May Backfire". NPR.org. Retrieved 25 June 2021.
  21. ^ Dunleavy, Jerry. "Wuhan lab collaborator recused from Lancet's COVID-19 origins investigation". Denver Gazette. Retrieved 25 June 2021.
  22. ^ Gorman, James (2021-03-05). "Some Scientists Question W.H.O. Inquiry Into the Coronavirus Pandemic's Origins". The New York Times. Retrieved 25 June 2021.
  23. ^ "Scientists call for new probe into COVID-19 origins - with or without China". Reuters. 2021-04-08. Retrieved 25 June 2021.
  • What name do peer-reviewed journal articles (and book chapters) use?
Peer-reviewed literature

Use some form of "Joint WHO-China study":

Bloom et al in Science,[1] Gündüz et al in European Journal of Therapeutics,[2] Hidalgo et al (Book Chapter),[3] Lee et al in Public Health,[4] Thoradeniya et al in Globalization and Health,[5]


Use some form of "WHO study" or refer to WHO as the sole author of the report:

Decroly et al in Virologie,[6] Frutos et al in Infection, genetics and evolution,[7] Koopmans M in The Lancet Infectious Diseases,[8] Wacharapluesadee et al in Nature Communications,[9] Wu et al in Nature Medicine,[10] Xiao et al in Scientific Reports[11]


Use a mix of the two:

Zaracostas in The Lancet[12]


Sources

  1. ^ Bloom, Jesse D.; Chan, Yujia Alina; Baric, Ralph S.; Bjorkman, Pamela J.; Cobey, Sarah; Deverman, Benjamin E.; Fisman, David N.; Gupta, Ravindra; Iwasaki, Akiko; Lipsitch, Marc; Medzhitov, Ruslan; Neher, Richard A.; Nielsen, Rasmus; Patterson, Nick; Stearns, Tim; van Nimwegen, Erik; Worobey, Michael; Relman, David A. (2021-05-14). "Investigate the origins of COVID-19". Science (New York, N.Y.). 372 (6543): 694. doi:10.1126/science.abj0016. ISSN 1095-9203. Retrieved 25 June 2021.
  2. ^ Gunduz, Reyhan; Agacayak, Elif; Yaman Tunc, Senem; Gul, Talip (2020-12-01). "Pregnancy During the Covid-19 Pandemic: What an Obstetrician Needs to Know". European Journal of Therapeutics. 26 (4): 337–343. doi:10.5152/eurjther.2020.20072. {{cite journal}}: |access-date= requires |url= (help)
  3. ^ Hidalgo, Jorge; Rodríguez-Vega, Gloria; Pérez-Fernández, Javier (2022-01-01). "The sudden appearance of SARS-CoV-2". COVID-19 Pandemic: 1–21. doi:10.1016/B978-0-323-82860-4.00004-5. Retrieved 25 June 2021.
  4. ^ "COVID-19: viral origins, vaccine fears and risk perceptions". Public Health. 2021-04-27. doi:10.1016/j.puhe.2021.04.013. ISSN 0033-3506. Retrieved 25 June 2021.
  5. ^ Thoradeniya, Tharanga; Jayasinghe, Saroj (2021-05-21). "COVID-19 and future pandemics: a global systems approach and relevance to SDGs". Globalization and Health. 17 (1): 59. doi:10.1186/s12992-021-00711-6. ISSN 1744-8603. Retrieved 25 June 2021.{{cite journal}}: CS1 maint: unflagged free DOI (link)
  6. ^ "John Libbey Eurotext - COVID-19 The WHO mission report struggles to trace the origins of the SARS-CoV-2 epidemic". Virologie. Retrieved 25 June 2021.
  7. ^ Frutos, Roger; Gavotte, Laurent; Devaux, Christian A. (2021-03-18). "Understanding the origin of COVID-19 requires to change the paradigm on zoonotic emergence from the spillover model to the viral circulation model". Infection, Genetics and Evolution. doi:10.1016/j.meegid.2021.104812. ISSN 1567-1348. Retrieved 25 June 2021.
  8. ^ Koopmans, Marion (2021-01-01). "SARS-CoV-2 and the human-animal interface: outbreaks on mink farms". The Lancet Infectious Diseases. 21 (1): 18–19. doi:10.1016/S1473-3099(20)30912-9. ISSN 1473-3099. Retrieved 25 June 2021.
  9. ^ Wacharapluesadee, Supaporn; Tan, Chee Wah; Maneeorn, Patarapol; Duengkae, Prateep; Zhu, Feng; Joyjinda, Yutthana; Kaewpom, Thongchai; Chia, Wan Ni; Ampoot, Weenassarin; Lim, Beng Lee; Worachotsueptrakun, Kanthita; Chen, Vivian Chih-Wei; Sirichan, Nutthinee; Ruchisrisarod, Chanida; Rodpan, Apaporn; Noradechanon, Kirana; Phaichana, Thanawadee; Jantarat, Niran; Thongnumchaima, Boonchu; Tu, Changchun; Crameri, Gary; Stokes, Martha M.; Hemachudha, Thiravat; Wang, Lin-Fa (2021-02-09). "Evidence for SARS-CoV-2 related coronaviruses circulating in bats and pangolins in Southeast Asia". Nature Communications. 12 (1): 972. doi:10.1038/s41467-021-21240-1. ISSN 2041-1723. Retrieved 25 June 2021.
  10. ^ Wu, Joseph T.; Leung, Kathy; Lam, Tommy T. Y.; Ni, Michael Y.; Wong, Carlos K. H.; Peiris, J. S. Malik; Leung, Gabriel M. (March 2021). "Nowcasting epidemics of novel pathogens: lessons from COVID-19". Nature Medicine. 27 (3): 388–395. doi:10.1038/s41591-021-01278-w. ISSN 1546-170X. Retrieved 25 June 2021.
  11. ^ Xiao, Xiao; Newman, Chris; Buesching, Christina D.; Macdonald, David W.; Zhou, Zhao-Min (2021-06-07). "Animal sales from Wuhan wet markets immediately prior to the COVID-19 pandemic". Scientific Reports. 11 (1): 11898. doi:10.1038/s41598-021-91470-2. ISSN 2045-2322. Retrieved 25 June 2021.
  12. ^ Zarocostas, John (2021-04-10). "Calls for transparency after SARS-CoV-2 origins report". The Lancet. 397 (10282): 1335. doi:10.1016/S0140-6736(21)00824-2. ISSN 0140-6736. Retrieved 25 June 2021.
  • What about other trustworthy sources (e.g. press releases)?
Other non-news non-academic sources

Use some form of "WHO study" or refer to WHO as the sole author of the report:
Official press release[1] from the governments of the USA, Australia, Canada, Czechia, Denmark, Estonia, Israel, Japan, Latvia, Lithuania, Norway, Korea, Slovenia, and the UK


Sources

  1. ^ "Joint Statement on the WHO-Convened COVID-19 Origins Study". United States Department of State. Retrieved 25 June 2021.
  • What about the primary source?
Primary source material

What is the official document called? (as in the report PDF)

"WHO-convened global study of origins of SARS-CoV-2: China Part"
Subtitle: "Joint Report"

What is the study that formed the background of the report called?

"Joint WHO-China Study"

Who commissioned the report?

The World Health Assembly (decision-making body of the WHO) in May 2020 (Resolution WHA73.1)

Who is the author in the report's own words?

The WHO team. The acknowledgments section is written as: "WHO wishes to thank...." The team acknowledges the China-appointed participants, but not themselves.

Who prepared/edited the document?

David W. FitzSimons, Sun Jiani, and Lisa Scheuermann. Google searches reveal that all three work at the WHO.

How was the report put together?

In the "Methods of work" section, the report says "The final report describes the methods and results as presented by the Chinese team’s researchers. The findings are based on the information exchanged among the joint team, the extensive work undertaken in China in response to requests from the international team, including re-analysis or additional analysis of collected information, review of national and local governmental reports, discussions on control and prevention measures with national and local experts and response teams, and observations made and insights gained during site visits."

Who is the report officially released by?

Posted as an official position statement, on behalf of the WHO as an entity, and presented to WHO Director-General Tedros Adhanom.



Note: Thank you to Forich for gathering a lot of this primary detail from the report itself. I would not have found those quotes without your work here.

Note: I gathered this evidence to start, but I'm happy to add any WP:RSes that anyone else finds to this section. Just let me know.

Evidence Gathered 18:31, 25 June 2021 (UTC) by Shibbolethink ( ) (updated 23:48, 25 June 2021 (UTC))[reply]

Adding that Fox and Newsweek have also referred to it as either a WHO report or WHO-led report, which I think helps point out that this is a term used across the political spectrum.[79][80] Bakkster Man (talk) 18:43, 25 June 2021 (UTC)[reply]
Done! I hadn't seen the Fox News one! I didn't add the Newsweek originally because the Perennial RS list has it as a non-RS post-2013. But it also says "case by case basis" and I think for the purposes of this survey, it makes sense to include. So I did just add it, if that wasn't clear! If anyone objects let me know.--Shibbolethink ( ) 18:51, 25 June 2021 (UTC)[reply]
Exactly, I wouldn't propose it as a source for article content, but as context of how the report is referred to across the political spectrum. it feels like precisely the kind of exception to make on a talk page for building consensus. Bakkster Man (talk) 18:57, 25 June 2021 (UTC)[reply]

Survey

  • Comment - I see several places where we do not explicitly refer to the study as a "joint study" or "WHO-convened" (Scientists involved in the WHO report), so option A (or the article) should be updated to recognize this. My preference isn't quite represented above, which would be to use one of the two official names the first time it's referenced (in the article or per-section), and then refer to it throughout the remainder as "the WHO study" or similar (perhaps with parenthetical explanation of the shortened name chosen). Also note, we should involve Talk:Severe acute respiratory syndrome coronavirus 2 as at least one reference to the report comes from text transcluded from that page. Bakkster Man (talk) 18:53, 25 June 2021 (UTC)[reply]
    Ah, I see how that option isn't precisely represented. I guess I would summarize your position as A or B at first in the lead or per-section, and then B throughout the rest of the body/section. Is that a fair summary? I'll simplify the options to make that more clear--Shibbolethink ( ) 18:59, 25 June 2021 (UTC)[reply]
    Close, but I'd say A or B on first use (possibly per-section), "WHO report" for all remaining. Bakkster Man (talk) 21:36, 25 June 2021 (UTC)[reply]
Note: This discussion has been advertised at the Fringe theories noticeboard. 19:16, 25 June 2021 (UTC)
Note: This discussion has been advertised at the NPOV noticeboard. 19:16, 25 June 2021 (UTC)
Note: This discussion has been advertised at Talk:Severe acute respiratory syndrome coronavirus 2. 19:25, 25 June 2021 (UTC)
  • Any of these appear to be justifiable with sourcing. Geogene (talk) 19:30, 25 June 2021 (UTC)[reply]
    We have had several revert-revert stalemates and WP:BRDs about this exact thing. So we probably need to come up with a consensus on which is best. If we don't, it just means more wasted editor time and headache. The point of this RfC (like most RfCs) is to resolve ambiguity about a question in which there is considerable disagreement, by gathering wider input. If we can establish a consensus about this, then at least we can point editors here when they try and introduce their preferred wording.--Shibbolethink ( ) 20:57, 25 June 2021 (UTC)[reply]
  • B - Personally I find the name itself to be the least important part of portraying the findings of this study. I get why some users may want to, in some way, acknowledge the COI of China being involved with the study. But the report itself was prepared, edited, and written by WHO affiliates and employees. We can help explain that COI, however small I personally believe it to be, by giving a short description of how the report came into existence, as we currently do in the 4th paragraph of the lead. The study was conducted jointly, but the report was written exclusively by the WHO. I think the WP:RSes also support B, as the most well-regarded peer-reviewed literature sources refer to it this way, as well as many reputable news agencies, though not all of them. It's clear this doesn't break down along political lines, and that this is just a confusion resulting from the study being conducted jointly. But we should refer to the report and its findings as authored by the WHO, because that's who wrote it. My 2 cents anyway.--Shibbolethink ( ) 19:35, 25 June 2021 (UTC)[reply]
  • B (and shortened thereafter) per the excellent and thorough WP:GOODRESEARCH done by Shibbolethink. There's little more to say, except maybe add a few more outlets/sources (I've looked for ones outside of the US, for variety): The Guardian clearly describes the report as being the "WHO report"[1][2] or being the work of the "WHO team"[3][4]; The BBC is very similar, clearly describing the report as issued by the WHO,[5] simply a "WHO investigation" or report[6][7] - there's one instance of mixed-usage,[8] although the piece describes work done by the "WHO team". CBC has "joint WHO-China study", but it's a reprint of an AP piece so not particularly interesting as far as we are concerned.[9] As for some scientific sources not already mentioned, Frutos et al. has "the official WHO investigation team". RandomCanadian (talk / contribs) 21:59, 25 June 2021 (UTC)[reply]
  • B is at least accurate and not misleading. Option A seems to suggest that the Chinese government coauthored or formally endorsed the report (although the word joint could be interpreted differently by different readers). NightHeron (talk) 00:30, 26 June 2021 (UTC)[reply]
  • A, C, or E - I think leaving out "China" at first mention would be close to bordering on deceptive (but not quite, just nearing there); I don't necessarily think it would be helpful to say "WHO-China" over and over and over again, though, as that would venture into the territory of hitting the reader over the head. BUT, alternating between the two could also be problematic: it could make one think there are two different reports being discussed. So perhaps after first mention just call it "the report" or "the Report" (I know capitalisation nazis are not likely to allow the latter; I think all the fuss over what can and can't be capitalised is silly, myself). Firejuggler86 (talk) 00:39, 26 June 2021 (UTC)[reply]
    If we explain the context of China's involvement in the lead immediately after the first use of the term, what's deceptive about B?--Shibbolethink ( ) 00:42, 26 June 2021 (UTC)[reply]
  • Oppose switching between "WHO-convened" and "WHO–China" as proposed in "C" and "D", because that will make it sound like there are two separate studies/reports. User:Bakkster Man's comment has made me wonder whether the real question is how to describe the study (which obviously involved the Chinese government) or the publication (whose authors do not seem to include the Chinese government). WhatamIdoing (talk) 04:15, 26 June 2021 (UTC)[reply]
  • B on first use (possibly per-section), "WHO report" for all remaining. Forich (talk) 05:32, 26 June 2021 (UTC)[reply]
  • B but D is okay too, depending on context. The study and its report are notable enough for their own page, which should also include responses from the WHO DG, WHO member states and independent scientists. CutePeach (talk) 14:17, 28 June 2021 (UTC)[reply]

why the Bloom lab preprint doesn't make the lab leak more likely

(and also another reason why we probably shouldn't include it in articlespace yet).

Just wanted to drop this excellent Twitter thread from Trevor Bedford[81]. And also this Jesse Bloom twitter thread helps as well[82].

What this shows is that the added sequences that Bloom had his preprint focused on only further solidify the phylogenetic argument that the B lineage of the virus (which is most of what we've seen in early Wuhan) was probably not the founder strain. Molecular clock vs rooting in closest known viruses disagree, but it's clear that the most parsimonious arrangement has the A strain as the founder. If true, this makes Wuhan a less and less obvious origin point for the virus. The Bloom preprint sequences only emphasize that further.

and this debate, this confusion about what the preprint means, is precisely why peer review is so valuable and why preprint findings should not be included in these COVID-19 articles, regardless of how much coverage they get in news sources.

We need the robust criticism and context from other scientists to make these findings clear and robust. and useful.--Shibbolethink ( ) 15:09, 26 June 2021 (UTC) (edited 15:37, 26 June 2021 (UTC))[reply]

So lemme get this right. We've got well-sourced assertions, given without attribution in the sources that appear to be factually correct and are undisputed (even by those who take a different interpretation on what the event means), published in Nature, the New York Times, CNN, and other HQRS, and we want to exclude any mention of this from Wikipedia on the basis of a Twitter thread by Trevor Bedford? ProcrastinatingReader (talk) 15:15, 26 June 2021 (UTC)[reply]
That's not really what I said. I'm sorry let me try and make it more clear.
My argument about non-inclusion is that these news coverage sources don't know how to properly contextualize or interpret the findings of the preprint, as per WP:SCHOLARSHIP. News agencies do not, by and large, have the expertise to understand the science behind this controversy. And, more specifically, the Nature article you're referring to is a news article. It is not peer reviewed or (usually) written by a scientist who has training in this field. Ewen Callaway has a master's in microbiology, to be fair[83].
In general, I find the argument for inclusion using the Nature news[84] and Science news[85] pieces to be more compelling.
But I still think for something this controversial, this debated, we are way more likely to get it wrong than right by relying on news sources. Here are several news agencies with great reputations who completely fumble the coverage of this preprint, by emphasizing how "secretive" and "cloak and dagger" this is [86][87][88][89]. Bloom himself (in the twitter thread above) emphasizes that the secrecy should not be assumed to be malfeasance [90], that the issue is the totalitarian regime of the Chinese government, and also how these sequences make the phylogenetic argument for a zoonotic origin slightly more solid.
The academic press news sources (which, at least in the case of the Nature piece, do cover this well) push me a bit closer in the direction of inclusion, but not all the way. I'm sorry that you disagree. I'm not trying to be tendentious, just asserting that there is a reason why Preprints are problematic. They need the context of peer review, much like what Bedford is doing openly in this twitter thread. The final published version of Bloom's article would do well to have a more clear and frank discussion of the multiple rooting possibilities. And better phylogenetic trees that show this rooting problem. He discusses it some, but in a confusing way. It's confusing for me, and I have a PhD in this field. So why do I expect news reporters to have a better grasp of it?--Shibbolethink ( ) 15:37, 26 June 2021 (UTC)[reply]
If I recall correctly, there was a consensus at Wikipedia talk:Biomedical information saying that special sourcing requirements do not apply to the origins. Although currently unclosed, by numbers alone it's obvious it won't be closed any other way. If our WP:RS guideline is resulting in factually accurate information, that should be addressed separately.
About this, it appears nobody disputes the core facts. Here it says Some scientists are skeptical that there is anything sinister behind the removal of the sequences. ... “You can’t really say why they were removed,” Dr. Bloom acknowledged in an interview. “You can say that the practical consequence of removing them was that people didn’t notice they existed.” Even those disagreeing on the interpretations agree on the core fact that sequences were removed due to a request by the Wuhan University.
There exists no policy that allows editors to unilaterally decide publications by community accepted reliable sources are factually inaccurate. We are not citing to a preprint, we're citing to reliable sources discussing things in a preprint. These are two very different things. Reliable sources are allowed to do original research - in fact, that's precisely the point. ProcrastinatingReader (talk) 15:51, 26 June 2021 (UTC)[reply]
There were actually a fair number of comments on that RfC that also emphasized that the RfC was meaningless or unnecessary, because we already have policies which say that scholarly journal articles have primacy over news articles, even in spaces where MEDRS does not apply.--Shibbolethink ( ) 15:53, 26 June 2021 (UTC)[reply]
Yes, iirc that was my argument, but no peer reviewed scholarly sources exist for this particular issue, so we go to tier 2 RS (good illustration: User:Levivich/Tiers of reliability). ProcrastinatingReader (talk) 15:56, 26 June 2021 (UTC)[reply]
I think we're arguing past each other. I get what you're saying, I get the tiers of reliability. The other important point would be the way the General/Discretionary Sanctions handle preprints in this topic area. There are quite a few other preprints which never got published, or which are preposterous, or even get published in crappy journals, which got lots and lots of news coverage. However we don't cover them here. This case with the coverage about this preprint is different, but this serves to show the edge case. One example would be this absurd paper in a Biophysics journal published by those two Norwegian guys that is full of misinformation [91][92][93][94][95][96]. Sørensen et al got lots and lots of basic facts about the virus wrong, and a few WP:RSes covered it. In some cases, they actually repeated false claims of the paper, without proper fact checking. Does that mean we also should have a section on this paper/preprint? If we had done so right when it happened, we would have repeated those false claims. And not had the proper context to know this preprint was bogus and full of misinformation.
I guess what I'd like to say is, if we're going to include it, the weight and proportion and context should be entirely based upon the news articles published in Nature, not these other outlets. And frankly, if it were solely my decision (which it isn't, I'm a fan of consensus), I wouldn't include it at all until it were peer reviewed. Because it's a controversial set of claims and ideas, in a controversial topic area, under DS.
If we're going to include it, the context of the Nature news article is probably the best around, and should form the basis for inclusion. Emphasizing the way this changes the phylogenetic argument, and how it means we need a more open investigation with less interference from the Chinese government. NOT emphasizing the "secret deletion" or the way this somehow means a conspiracy is afoot. Does that make sense? I think our due weight should be based on the best quality sources, namely those two articles in Levivich's Tier 2.--Shibbolethink ( ) 16:10, 26 June 2021 (UTC)[reply]
In that example you gave, the only tier 2 RS is The Telegraph, and that's a "Letter to the editor", not a news article, so the piece itself is not RS, and The Telegraph made no such claims in its own voice. So it's not really comparable to this situation. ProcrastinatingReader (talk) 16:17, 26 June 2021 (UTC)[reply]
More generally, there could be a case where the RS get it wrong, but then Wikipedia (as a tertiary source that merely summarises the reliable secondary sources) will and should get it wrong too. Wikipedia can only do as well as the RS do. Editors setting their own standards is a hazy line (if it were acceptable, then surely "the sources are POV" would be a valid claim to exclude content in the American politics topic area). I have no strong opinion on how exactly this material is covered, but complete exclusion or a presentation that is not reflective of the best sources is contrary to Wikipedia policy. ProcrastinatingReader (talk) 16:23, 26 June 2021 (UTC)[reply]
We are not citing to a preprint, we're citing to reliable sources discussing things in a preprint: Pre-prints are unreliable for factual claims. Popular press articles about pre-prints are even worse. We should not be relying on low-quality sources for any remotely scientific claim, and in the context of virology, the NYT, CNN and the rest of the popular press is low-quality.
By the way, it should be noted that the sequences in question were published by the Chinese researchers who obtained them in a peer-reviewed journal in June 2020: [97]. The specific claim being made by Bloom is that they were removed from a specific database, but the researchers did subsequently publish the sequences elsewhere. -Thucydides411 (talk) 16:39, 27 June 2021 (UTC)[reply]
The articles I saw, most of them explicitly mentioned that Bloom himself said this doesn't affect the origin debate (specifically where the zoonosis occurred). It's the insistence to add information about the preprint to this article which seem to be wanting to make the link, contrary to the author's statements.
I think we can (and should) improve our discussion of the pre-Huanan Market spread without needing to rely on the preprint. Bakkster Man (talk) 16:32, 26 June 2021 (UTC)[reply]
  • It does not matter if it makes "lab leak" more or less likely. Were new sequences of the virus found, was it an important finding, and was it reported in secondary RS, such as CNN (certainly not Twitter)? The answer to all these questions is definitely "yes". So include this sourced info on the page please. My very best wishes (talk) 01:30, 27 June 2021 (UTC)[reply]

Why lab leak likely/unlikely is completely besides the point

As those of you who have read the preprint already know, Bloom never claimed his findings gave more weight to any lab origins hypotheses. Rather, Bloom presents the removal of the data from NCBI and CNGB as prima facie evidence of the Government of China’s gag order in effect, as clearly stated in the preprint’s abstract. This gag order was first reported by the The Associated Press in their bombshell investigative report [98]. This behavior is not the norm in Public Health Emergencies as per International Health Regulations, and this is why I highlighted the importance of phylogenetic evidence in the RFC about COVID-19 origins [99]. Serological or phylogenetic analysis of the index patients and virus are probably the only means for scientists to investigate the origins of this virus, without the Government of China’s cooperation on a forensic investigation of wet markets and labs in Wuhan.

Those here trying to downplay the deletion of these sequences and advocating for the WP:POVDELETION of this story either don’t understand the role of phylogenetics in epidemiology, or the importance of Data publishing for Reproducibility in Open research and Open science - so you should click these links if they’re blue for you, and read this letter too [100]. For sure it was nice of the authors of that paper to leave us a table of mutations in and publish it to a nanotechnology journal where no virologist would ever have found it, but that table wouldn't have been enough for Bloom to do a phylogenetic analysis and publish the findings of what he believes are ancestral sequences of the virus as it was spreading in its early days. With that said, we should include the critical comments from Robert F. Garry in the WashPo for WP:BALANCE, as he is one of the most respected virologists in the world, even if still red linked. It should be noted that Gary’s response is to Bloom presenting his finding as evidence of cover up, and not to his phylogenetic analysis, which he hasn’t commented on, yet.

Note that the Government of China is holding up talks for [101] and resisting certain terms of [102] the International Treaty for Pandemic Preparedness and Response, which will be the biggest revision of International Health Regulations since the last revision created after their well documented cover up of the early spread of 2002–2004 SARS outbreak. This is still all coming together in WP:RS, so we should take it slowly. CutePeach (talk) 13:51, 28 June 2021 (UTC)[reply]

@CutePeach: Those here trying to downplay the deletion of these sequences and advocating for the WP:POVDELETION of this story either don’t understand the role of phylogenetics in epidemiology, or the importance of Data publishing for Reproducibility in Open research and Open science... To be clear, the opposition appears to have been almost entirely a difference in interpretation of WP:PAGs, not the content itself. We'd be having a much different discussion right now if this was already peer reviewed. Let's not jump on the POV-train. As you said later: This is still all coming together in WP:RS, so we should take it slowly.
With that said, we should include the critical comments from Robert F. Garry in the WashPo for WP:BALANCE, as he is one of the most respected virologists in the world, even if still red linked. It should be noted that Gary’s response is to Bloom presenting his finding as evidence of cover up, and not to his phylogenetic analysis, which he hasn’t commented on, yet. I broadly agree that this is the key in how we present this. We have a RS that sequences were deleted at the request of the submitter (on the basis of submission elsewhere, do we have a RS that identifies them as not being available?), the initial claim in the preprint isn't itself an RS and the coverup claim should be handled with care (as I explained above), with RS for other scientist's reactions. Could you link the WaPo article with the Garry comments? I included a critique from David Robertson in Business Insider in my proposed rewrite above (see discussion) and could see the potential to drop that one in instead if that's what we're going with. Bakkster Man (talk) 14:14, 28 June 2021 (UTC)[reply]
Bakkster Man thanks for your reasoned response as always. Here is the WashPo article with critique from Gary [103]. Please note that Gary is one of the holdouts of the Proximal Origin paper, and I suspect it's personal for him because he has worked closely with Shi of WIV for many years, and he has also been falsely implicated in lab leaks before, which may be noted in other RS. CutePeach (talk) 14:27, 28 June 2021 (UTC)[reply]
ProcrastinatingReader, your claim "there was a consensus at Wikipedia talk:Biomedical information saying that special sourcing requirements do not apply to the origins" is entirely false. There was a poll asking "to unambiguously define disease and pandemic origins as a form of biomedical information" (i.e. under the scope of MEDRS). That poll failed. But it doesn't mean that it is entirely not biomedical information. As many, including myself (who opposed) said, there are aspects of the origin of covid that are biomedical information (and thus under the scope of MEDRS) and there are aspects that are not (and covered by other guidelines and policy). Just because it isn't entirely biomedical information doesn't mean it is entire not biomedical information.
I note that Bakkster Man has added some text on the deletion dispute per discussion further above. In my view, that dispute warrants coverage as a (for now) notable scientific dispute about the origins of covid 19, and not for the actual biomedical claims made by Bloom (which fail MEDRS and fail the sanctions against preprints regarding covid). Whether that dispute rumbles on or gets forgotten in a week or two will determine if the text is notable enough to remain. -- Colin°Talk 18:33, 28 June 2021 (UTC)[reply]
@Colin: I'll point out again, nobody has yet made the case that this claim requires MEDRS sourcing. The first references of MEDRS regarding this topic were from people arguing against a strawman that the revert was based on WP:MEDRS rather than WP:SCHOLARSHIP. Let's not allow preemptive arguments against MEDRS to become an albatross that prevents productive consensus building.
In the end, I pulled the pre-print note from Li-Meng Yan's article (to point out that it lacks review), and followed up the deletion claim (clearly non-biomedical) with the confirmatory note from a news RS. If there's room to improve it's with the claim of the phylogenics, which I watered down significantly (and I suspect we have prior strong sources we can point to to make the claim that this was already well established science, but need help finding) and the contrary opinion from another scientist. The thing that ended up swaying me mostly was that while I cite the pre-print, it's not really used to make any claims but has to be at least referred to because it prompted the discussion. Definitely a better inclusion that the originally requested bare presentation of 'he found missing sequences and we don't know why they were missing', and calls to restore prior to at least adding that context. Bakkster Man (talk) 19:04, 28 June 2021 (UTC)[reply]
You may be right that nobody removed it is claiming it requires MEDRS sourcing, but those arguing for its inclusion have mentioned MEDRS and their views on its apparent non-applicability to this entire article. -- Colin°Talk 19:34, 28 June 2021 (UTC)[reply]
The first mentions of MEDRS were people advocating for inclusion, and the only mentions by those advocating against inclusion were in agreement that MEDRS didn't apply. Just because someone mentioned MEDRS in another discussion about other content doesn't mean we should keep referring back to it preemptively, especially not when used to say something along the lines of 'this isn't a BMI claim, and there are no other applicable sourcing policies'. That's why I call it a strawman, and why preemptively mentioning it hurts our consensus building. Bakkster Man (talk) 20:20, 28 June 2021 (UTC)[reply]
Yes... So, the origin of COVID-19 isn't covered by MEDRS, which is what I said. If some particular sentence in this article falls under a different applicable category then obviously it's covered as usual, but it's not covered by virtue of being related to the origins of COVID. The idea that sequences were deleted is not covered under a different applicable category. The text you have introduced is pretty much what I was arguing should've been added (or, at least, there was no sourcing reason not to add it), so I don't really have any remaining concerns here. ProcrastinatingReader (talk) 23:58, 28 June 2021 (UTC)[reply]
Saying "the origin of COVID-19 isn't covered by MEDRS" won't make that true no matter how many times you repeat it. Some aspects of the origin of COVID-19 are covered by MEDRS and some aspects aren't. Look, if some academic had discovered a recent ancestor of COVID-19 in some Chinese bat cave, and nobody had ever suggested a lab leak, this entire thing would be a short paragraph or even just a sentence in some other article, and be sourced entirely in compliance with MEDRS. -- Colin°Talk 11:46, 29 June 2021 (UTC)[reply]

As it stands, there's far too much space given to the Bloom/SRA story. The problem is that it takes several sentences to adequately explain what happened (reads published in the SRA, reads deleted from SRA, sequences published in a journal, Bloom writes preprint, various people comment on preprint). But in the context of the overall investigations into the origins of SARS-CoV-2, this is a minor story, and it shouldn't take up this much article space. -Thucydides411 (talk) 17:40, 29 June 2021 (UTC)[reply]

This was my primary concern as well, though I think it's mostly mitigated by being near the bottom of the article and contextualized (your edits were very beneficial). I'd actually like to see that section expanded with some other (more notable) independent findings. That might also point out if this preprint is a nothingburger that it's worth removing (and will reduce our reliance on the single WHO study). Bakkster Man (talk) 18:09, 29 June 2021 (UTC)[reply]
The WHO study is, by far, the most thorough investigation into the origins of the virus. It should take up most of the space in this article. -Thucydides411 (talk) 19:04, 29 June 2021 (UTC)[reply]
I'm not suggesting otherwise, it should have top billing right now. But I do think there's room to flesh out information on other, less notable studies lower on the page. Bakkster Man (talk) 02:32, 30 June 2021 (UTC)[reply]

Thucydides411, your edit [104] puts the claim that the Wuhan University researchers published the sequences, which is not what the Nature article or any of our other sources say. The Nature article makes it clear the sequences were deleted from the SRA before the paper was published, and the sequence information it was published with did not contain the raw data. I have explained above that a table with a list of mutations is not the same as raw sequence data, and the entire section seems to brush that aside as a "nothingburger". CutePeach (talk) 03:29, 30 June 2021 (UTC)[reply]

In this case, the single nucleotide polymorphisms contain all the relevant information. The criticism is that the raw reads were deleted from the SRA, but the paper still made the most important information available (though I don't think even Bloom is claiming that these particular sequences say much of anything new about the origins of SARS-CoV-2). -Thucydides411 (talk) 22:58, 1 July 2021 (UTC)[reply]
Still, Nature Magazine does not make that distinction. Your edit is based on a WP:MISREPRESENTATION WP:MISINTERPRETATION of our source.. What you call relevant information and raw reads are not the same thing and we should not be presenting them as such for our readers. CutePeach (talk) 11:38, 2 July 2021 (UTC)[reply]
I don't agree with your assertion that my edit misrepresents this issue. As the Nature article explains,
Stephen Goldstein, a virologist at the University of Utah in Salt Lake City, points out that the sequences Bloom recovered were not hidden: they are described in detail, with enough sequence information to know their evolutionary relationship to other early SARS-CoV-2 sequences, in the Small paper.
The issue Bloom is criticizing is the deletion of raw reads from a particular database, but as the Nature article points out, the same authors who deleted the raw reads also published the sequence information. But again, Bloom's pre-print is still a pre-print, and I'm highly doubtful that we should say anything about it in the article at all. Just in the time that we've been discussing the pre-print here on the talk page, it has undergone very significant revision. -Thucydides411 (talk) 13:56, 2 July 2021 (UTC)[reply]
I think, with this information part of the section, it's worth wondering whether this is a nothingburger that shouldn't be covered, or if it is that it's covered more directly as 'much ado about nothing'. Something more along the lines of "A preprint claimed to find missing genomes which had been deleted from the SRA, however this genetic information had simply been published in an alternate location." We've mentioned it, but not given it more credence than it's worth. @Colin: ping since you had input on this previously. Bakkster Man (talk) 18:35, 2 July 2021 (UTC)[reply]
I just gave that Independent Investigations paragraph a quick read. I think the whole paragraph/section should go. Giving this much weight to a WP:SELFPUBLISHed preprint seems a bit WP:PROFRINGE to me. If it takes 5 sentences to explain something claimed in a preprint, that is just way too much weight to something that is self-published, imo. –Novem Linguae (talk) 18:50, 2 July 2021 (UTC)[reply]
I think the main argument was that if someone comes looking for discussion of the Bloom preprint, they should find information about it here. Hence my suggestion to reduce it to a sentence or two of it basically being debunked, rather than the tempest in a teapot of "someone moved genetic info, another person noticed, and some other people freaked out". Bakkster Man (talk) 18:57, 2 July 2021 (UTC)[reply]
Bakkster Man, agreed. We are basically extremely WP:UNDUE by drawing out the entire saga instead of just saying how much of a nothingburger it is.--Shibbolethink ( ) 20:27, 2 July 2021 (UTC)[reply]
@Thucydides411: again, the Nature Magazine article does not say that the sequences were republished. Goldstein’s comments can be quoted using WP:INTEXT attribution, but using them in place of statements made by the authors of the article or to twist the meaning of their statements is WP:MISINTERPRETATION. Bloom’s latest updates to his preprint clarify questions, including those from Goldstein, but they do not change his allegation that the SRA deletion was to obscure the existence of the data.
@Bakkster Man: your claim that this genetic information had simply been published in an alternate location is false, as the sequences were not republished, which I have repeatedly pointed out above. Bloom’s preprint certainly > hasn't been debunked as you also claim, and by "it" I mean its main finding, which was that the deletion of the sequence data constitutes prima facie evidence of the Government of China’s gag order on Chinese scientists in effect. Even Goldstein conceded that in his Disqus comments on the preprint, calling on Bloom to focus his claim on the Chinese government and not Chinese individual scientists.
Shibbolethink please can you explain why a story reported by Science Magazine, Nature Magazine, USA TODAY, The Daily Telegraph, Washington Post, New York Times, Wall Street Journal, South China Morning Post, Business Insider and El País is a nothingburger? More importantly, now that you are here, please can you respond to the point I made in the header of this subsection titled lab leak likely/unlikely is completely besides the point. We are discussing the removal of sequence data intended to obscure their existence, as reported by our reliable sources. Dr Bloom was careful to qualify his findings as informative but not transformative and that the attention his preprint got was because of how people are hungry for any data [105] - something which there is a severe lack of here. Some editors here seem to be misremembering the paucity of data here, possibly in a bid to downplay Bloom’s findings. CutePeach (talk) 07:27, 4 July 2021 (UTC)[reply]
CutePeach, Please see your talk page. It isn't enough to be covered by all those RSes, what matters is "do they cover it in reference to the virus' origins?" and more specifically, "do the WP:BESTSOURCES cover it in relation to the virus' origins?" I'm not convinced they do, given that everyone here is quick to mention how little it does to change the estimate. Purely as my expert opinion: "that table wouldn't have been enough for Bloom to do a phylogenetic analysis" is not true. SNPs, if they are comprehensive (synonymous & non-synonymous, genome-wide) are exactly what you need to do a phylogeny.--Shibbolethink ( ) 07:42, 4 July 2021 (UTC)[reply]
@Shibbolethink: I ask you again to please respond to the point I made at the start of this subsection. As to your WP:AGF warning on my talk page, it is clearly evident that there are editors here WP:MISINTERPRETING our sources in order to downplay the significance of Bloom’s findings and delete all mention of them from our article. If you want to achieve WP:BALANCE, you can cite expert WP:OPINIONs as quoted in our WP:RSs, instead of citing only your own expert opinion. The Science Magazine article quotes W. Ian Lipkin as saying There may have been active suppression of epidemiological and sequence data needed to track its origin. On the relevance of Bloom’s findings to the subject of the article, Lipkin is quoted as saying This is a creative and rigorous approach to investigating the provenance of SARS-CoV-2. I really don’t know why you are trying to argue over every aspect of COVID-19 origins that might point to a laboratory incident. CutePeach (talk) 09:13, 4 July 2021 (UTC)[reply]
We can look again at what the Nature Magazine article says:

Stephen Goldstein, a virologist at the University of Utah in Salt Lake City, points out that the sequences Bloom recovered were not hidden: they are described in detail, with enough sequence information to know their evolutionary relationship to other early SARS-CoV-2 sequences, in the Small paper. (emphasis added)

The use of "points out" indicates that Nature Magazine agrees with the statement, and even putting that aside, the above statement is simply true. Table 1 of the paper contains the SNPs, which is what you need to know the sequences. But again, we're talking about a pre-print here, not a published paper, and that pre-print is undergoing significant changes in real time. It's already been significantly modified just while we've been discussing it, and it's unclear if and in what form it will be published in a peer-reviewed journal. We should not have an entire section on a pre-print. -Thucydides411 (talk) 11:39, 4 July 2021 (UTC)[reply]
CutePeach the deletion of the sequence data constitutes prima facie evidence of the Government of China’s gag order on Chinese scientists in effect. Even Goldstein conceded that in his Disqus comments on the preprint, calling on Bloom to focus his claim on the Chinese government and not Chinese individual scientists. Sounds like WP:OR to me. Based on the most reliable of sources, Disqus comments! You're making quite the case for removing the sentences outright. Bakkster Man (talk) 20:04, 4 July 2021 (UTC)[reply]
It is or ought to be it rrelevant ot his discussions whether or not COVID19 originated in a lab, and, if so, how it became released. It'ss an interesting question, and , like many questions about the specific origin of diseases, of interest both to epidemiologists in the narrow sense, and scientists generally, and the general public. For the general public is interested in this sort of information even when the disease is not a current threat, and is very certainly interested in this particular information, because of the general and still uncontrolled threat to mankind. This requires determining in detail the science and also the factors that might tend to obscure the science, and a wide range of specialist will be involved. Personally, as a biologist with my doctoral training in the only non-medical school Department of Virology in the US, I'm inclined to (over) value the molecular biological evidence, but that's just me. as a biologist, not me as a Wikipedian. We report not the truth, but the verifiable information, and in this case, the verifiable information about the various hypotheses that people consider. Whatever the origin prove to be, and based on the molecular evidence so far, I doubt it was the Wuhan laboratory, we still need to discuss the various hypotheses; and, considering the world-wide interest in this issue, and its political and science-policy implications, people would seem likely to continue this interest and discussion indefinitely. Certainly, the mere possibility that it is laboratory origins and the especially the remote possibility that the strain was deliberate produced in a gain-of-function experiment whether true or false, will have very grave implications for the ability to do further research of this sort in China or anywhere else, and proving this was not the case will not and should not diminish the social concern about such research.
It requires neither political nor scientific sophistication to see this. That we do not cover it fully because it it possibly not the more correct hypothesis is a disgrace, and an example of OR in WP running amuck.Perhaps OR is not the right term, but the unaccountable prejudice that anything ever espoused by a far right wing source is inherently ludicrous and not worth further discussion. The principle of free inquiry is that everything ,however unlikely, and who ever supports it, is open to discussion. And if the discussion is substantial , whether in scientific or lay sources, it must be covered by Wikipedia. DGG ( talk ) 10:27, 4 July 2021 (UTC)[reply]
DGG the particular problem in this discussion is that Thucydides411 is claiming - falsely - that the sequences were republished, and Shibbolethink, is claiming that the table of mutations which were republished (not the sequences) are enough for a phylogenetic analysis. As I have explained in my indented post immediately above yours, the first claim is patently false, and the second claim is tedious, but both are WP:OR. These kind incredibly tedious discussions are what made Normchou ignore talk page discussions altogether, which Shibbolethink got him banned for. Tagging Johnuniq and HighInBC. CutePeach (talk) 11:07, 4 July 2021 (UTC)[reply]
As a matter of fact, a full description of the sequences was published, as you can verify by either opening up the paper or by reading the Nature news article about it. -Thucydides411 (talk) 11:31, 4 July 2021 (UTC)[reply]
Description of the sequences is not the same thing as raw sequence data! Deleting such data from NCBI is not normal! Francesco espo (talk) 12:26, 4 July 2021 (UTC)[reply]
The sequences and the raw reads are not the same. The former were fully described in the journal article. -Thucydides411 (talk) 14:32, 4 July 2021 (UTC)[reply]
As I said, that's none of our business. Deciding whether a scientific hypothesis is sufficiently supported by th evidence is not the role of WP. We repport the proposal, and we report what others say about it. my main point remains, that, if, as I expect, the proof is sufficient and the sequence is known, and it does not seem compatible with lab transmission, the lab transmission hypotheses should be covered just the same, as disproving it would have been part of the scientific information. We can report he claims, however thr truth may eventually be. If there's a question of balance or doubt, I support including material (with the only 3 exceptions BLP, unsourced, and advertising, neither of which is relevant here). If we do include, people can judge. If not ,we give them no information. It, like all experimental or observational scientific information should be presented in the terms of "apparently confirmed hypothesis" , not "proof". Proof in science is transient. DGG ( talk ) 11:26, 4 July 2021 (UTC)[reply]
@Bakkster Man:I respectfully disagree with the "tempest in a teapot" characterization. As CutePeach put it, the role of phylogenetics is key to the origin question. I'm including the first paragraph of the ""Discussion" section of the preprint because it is really quite accessible to readers who wish to understand the impact of this story:
I have identified and recovered a deleted set of partial SARS-CoV-2 sequences from the early Wuhan epidemic. Analysis of these sequences leads to several conclusions. First, they provide further evidence Huanan Seafood Market sequences that were the focus of the joint WHO-China report are not representative of all SARS-CoV-2 in Wuhan early in the epidemic. The deleted data as well as existing sequences from Wuhan-infected patients hospitalized in Guangdong show early Wuhan sequences often carried the T29095C mutation and were less likely to carry T8782C / C28144T than sequences in the joint WHO-China report. Second, given current data, there are two plausible identities for the progenitor of all known SARS-CoV-2. One is proCoV2 described by Kumar et al. (2021), and the other is a sequence that carries three mutations relative to Wuhan-Hu-1. Crucially, both putative progenitors are three mutations closer to SARS-CoV-2’s bat coronavirus relatives than sequences from the Huanan Seafood Market. Note also that the progenitor of all known SARS-CoV-2 sequences could still be downstream of the sequence that infected patient zero—and it is possible that the future discovery of additional early SARS-CoV-2 sequences could lead to further revisions of inferences about the earliest viruses in the outbreak.
I also want to emphasize that "lab leak" is really besides the point here. The fact that early Guangdong viruses are closer to SARS-like bat CoVs agrees with the author of this widely cited phylogenic analysis published in PNAS who has stated publicly that scientists should look for patient zero in South China. In other words, just in case anyone here is under the impression that inclusion of this story is somehow "POV pushing" they're missing the point entirely. No matter where the virus came from, sequences like these are among the most important evidence to answering the question.KristinaLu (talk) 17:25, 4 July 2021 (UTC)[reply]
@KristinaLu: And once the pre-print is reviewed and published, then his allegations might be credible. Until then, I'm incredulous (and I'd suggest WP policy requires us to be incredulous until then). And, per quotes in RS, seems he may have jumped the gun. Hence the 'tempest in a teapot'. Bakkster Man (talk) 20:00, 4 July 2021 (UTC)[reply]
@Shibbolethink: please respond to the point made by CutePeach in the header of this subsection entitled Why lab leak likely/unlikely is completely besides the point.KristinaLu (talk) 17:49, 4 July 2021 (UTC)[reply]
hi KristinaLu I'm starting a long wikibreak as I enter the phase of medical school that starts to consume all of one's waking time in order to figure out what kind of doctor one wants to be. Wiki will unfortunately get in the way of that. Please help me maintain my wikibreak by not tagging me again. I'm sure one of the many other helpful users around here can answer any questions as well as I can. I also would like to note, it may help them answer if it were posed in the form of a question or a specific change that you or CutePeach would like to propose. From a cursory glance, I don't see either in the lead of this section. --Shibbolethink ( ) 17:59, 4 July 2021 (UTC)[reply]

What to do with the Bloom paragraph

Regarding the section titled "Independent Investigations", should we keep as is, condense it, or remove it? –Novem Linguae (talk) 07:59, 3 July 2021 (UTC)[reply]

  • I think we should remove the entire section/paragraph. It doesn't seem particularly related to investigating the origins of COVID-19. It is a self-published preprint. And it requires 5 sentences of explanation. Giving this much WP:WEIGHT to a minor story seems kind of WP:PROFRINGE to me. We're amplifying this "controversy" way more than it deserves. –Novem Linguae (talk) 07:59, 3 July 2021 (UTC)[reply]
  • Invalid Motion. Please see WP:NOTVOTE and WP:NOVOTE. Looking at the comments in this discussion and the #Early Chinese Virus sequencing deleted discussion, I do not see a consensus to remove this section and I’m thoroughly unimpressed with those trying to downplay the significance of Bloom’s finding and dismiss their relevance to the subject of this article. CutePeach (talk) 09:20, 4 July 2021 (UTC)[reply]
    There's a lot of text above this section (more than I'm willing to grok). And people may also have changed their minds during the discussion. This format makes consensus easier to evaluate. –Novem Linguae (talk) 09:36, 4 July 2021 (UTC)[reply]
    Not invalid, read the policies above. This is a worthwhile method to gauge consensus in addition to a large conversation. Bakkster Man (talk) 11:29, 4 July 2021 (UTC)[reply]
    @Novem Linguae: I don't see anyone changing their mind other than Bakkster Man, who was never of the mind to include it in the first place, and isn’t voting here to remove it. Including Drbogdan who first added the report, I count more editors in support of including Bloom’s findings than those opposed. But even then, I've heard it said that we should base our editorial decisions on WP:PAGs, and not WP:POLLS. If we have new sources which say the actual sequences were indeed published in a new venue like some here are claiming, then that might change the consensus here. Until then, we should just quote Robertson and/or Goldstein for WP:BALANCE. CutePeach (talk) 03:14, 5 July 2021 (UTC)[reply]
  • Reduce significantly as proposed above, or remove. This level of weight definitely seems WP:UNDUE now. Not just for the lack of relation to the origins (per author), but because it's a pre-print. Fine to mention it so readers find content, but shouldn't be WP:PROFRINGE. Bakkster Man (talk) 11:29, 4 July 2021 (UTC)[reply]
Wait. How is this not related to origins if Bloom’s main findings is that the origins are being covered up by Chinese government? I am in the beach now but I can explain you deleting sequences from NCBI this is not normal! Francesco espo (talk) 14:06, 4 July 2021 (UTC)[reply]
Because Bloom said this didn't relate to the origins, and it isn't a 'cover-up' when the data just changes publishing venue. That you've jumped straight to it's a coverup means either you haven't read our article or the sources, or the article is insufficient to describe it (and the WP:PROFRINGE problem is worse than I thought). Bakkster Man (talk) 16:09, 4 July 2021 (UTC)[reply]
  • Firstly, I can only emphasise that Wikipedia:Polling is not a substitute for discussion. As soon as you ask a question and offer a limited set of options to pick from, you narrow the discussion to just those options. And as soon as one answers one's own question with a statement that contains a bold option choice the whole thing becomes a vote.
Secondly, you guys are quoting WP:WEIGHT and WP:DUE and WP:UNDUE at each other without reading them. (OK, I know you guys have read them, but really, look again). The policy says "Neutrality requires that mainspace articles and pages fairly represent all significant viewpoints that have been published by reliable sources, in proportion to the prominence of each viewpoint in the published, reliable sources". It does not say that weight is determined by the wise judgement of editors opinions about a research publication. This is entirely a matter for whether reliable sources publish (and continue to publish) about this topic. We give it similar prominence within the wider topic as they do. So I'd expect to see editors cite articles at each other rather than WP:UPPERCASE.
Wrt the paper being a pre-print, I think that is a red-herring in this discussion. Neither a pre-print nor a primary research paper published in the most prestigious journals such as The Lancet or Nature can establish their own weight. WP:PSTS says "Secondary or tertiary sources are needed to establish the topic's notability and to avoid novel interpretations of primary sources" and WP:PRIMARY says "Primary sources are original materials that are close to an event, and are often accounts written by people who are directly involved....e.g. a scientific paper documenting a new experiment conducted by the author is a primary source on the outcome of that experiment. So even once Bloom's paper is published, we can't use it as a source, and it is itself irrelevant wrt weight arguments.
I also caution against citing WP:PROFRINGE. Firstly, it just gets people cross when you start saying the word "fringe" wrt a scientist who isn't a crank. But mainly because that's an argument about whether we should say "Sequences of the Covid-19 genome were surreptitiously deleted from a database as part of a cover-up by the Chinese government". And we don't say that.
I don't think the biomedical science or data forensic aspects of Bloom's paper warrant publication in Wikipedia. What I did think was notable, the other week, was the stramash among scientists discussing those claims. That found notability in a number of highly regarded magazines and newspapers. And in order to discuss that dispute we of course needed to, as briefly as possible, describe what the fuss was about using those secondary sources. Readers of those other publications may turn to Wikipedia to see what it says about it, and I think an information vacuum was not serving our educational mission. Add to that the high degree of conflict among editors interpreting this delay in reporting current affairs as "censorship" rather than editorial restraint about what may end up being, as some put it, a nothingburger. IMO, I'd rather Wikipedia had a few lines of nothingburger for a few weeks, than editors get so frustrated with each other that they start attacking precious guidelines.
For that reason, I think we should keep a paragraph on this Bloom-deletion fuss on Wikipedia for now, and revisit it in a few weeks. If, for example, at the end of July, all the reliable sources have a June 2021 date on them, then it clearly hasn't retained sufficient enduring notability. And it will have served its purpose in providing information to readers who were reading about it elsewhere. -- Colin°Talk 14:09, 5 July 2021 (UTC)[reply]
I also caution against citing WP:PROFRINGE. Firstly, it just gets people cross when you start saying the word "fringe" wrt a scientist who isn't a crank. With all due respect, I find it strange that you admonished other editors for failing to read policy, then turned around and used the word "fringe" differently than the policy uses it. For the record, my reference refers entirely to the advocacy above that it needs to remain because as one editor interpreted it, the preprint concludes the origins are being covered up by Chinese government. That's the pro-fringe I'm worried about, especially since it suggests the wording in the article gives this impression rather than a truly NPOV wording. Bakkster Man (talk) 13:01, 6 July 2021 (UTC)[reply]
Bakkster Man, both you and Novem Linguae cite WP:PROFRINGE in your argument to reduce/remove the text. However our article text does not actually mention the contentious aspect of the story at all (that the sequences were deleted "surreptitiously" and that this is part of a "cover up by the Chinese government"). The claim that some parts of the sequences were removed from a database is not, as far as I can see from the secondary sources, contested by anyone. Everyone seems to accept that Bloom's forensic analysis was decent science, though we do need to be cautious about that since it hasn't been published. If you are aware that this claim that sequences were removed actually "departs significantly from the prevailing views or mainstream views", per WP:PROFRINGE, then some sources would clarify that for me.
One could argue that Bloom's most inflammatory claims (that the sequences were deleted "surreptitiously" and that this is part of a "cover up by the Chinese government") are not scientific claims at all, but political speculation of a very human and social kind. I even wonder if those claims will make it to the published edition at all.
The WP:PROFRINGE section says "if the only statements about a fringe theory come from the inventors or promoters of that theory, then "What Wikipedia is not" rules come into play." but Blooms paper and its various claims are covered by independent reliable sources, not just Bloom's preprint and promoters of the Lab Leak theory.
But as well as being irrelevant to our actual article text, while I do appreciate you are using the term per policy, Wikipedia Fringe theory tells us The term fringe theory is commonly used in a narrower sense as a pejorative, roughly synonymous with pseudo-scholarship.", which is why I say that it makes people cross. Both writer and reader of a WP:UPPERCASE shortcut can make the mistake of thinking it means something it doesn't. A careful writer will both try not to say something incorrect but also to try not to say something that is perceived to be incorrect. In an area where tensions are high, it doesn't help to say what some will read as WP:TOTALNUTCASE.
Lastly, I found this article interesting. Part of it says "Last month, 18 scientists writing in the journal Science called for an investigation into Covid-19’s origins that would give balanced consideration to the possibility of a lab accident. Even the director-general of the WHO, Tedros Adhanom Ghebreyesus, said the lab theory hadn’t been studied extensively enough. But it’s U.S. President Joe Biden’s consideration of the idea—previously dismissed by many as a Trumpist conspiracy theory—that has given it newfound legitimacy." And that article is not alone in noting this shift in how it is regarded. Regardless of what you and I think about the origins, and no matter how correctly you think you are citing guidelines, there will be folk who skim down this page and see a bunch of pro-science editors shouting "FRINGE" and wonder if our NPOV policy is being respected. -- Colin°Talk 14:27, 6 July 2021 (UTC)[reply]
@Colin: The claim that some parts of the sequences were removed from a database is not, as far as I can see from the secondary sources, contested by anyone. I agree, but perhaps I can better explain my concern to clarify.
Let's consider some other hypothetical bit of information which was removed from a database and republished elsewhere. Would that change alone be notable enough to spend five sentences of the article explaining? Or, would the notability be dependent on the circumstances surrounding the deletion and republishing? I'd argue the answer is "no, unless the circumstances surrounding it are what's actually due".
My concern is that the only reason people are considering the move notable is the allegation of a 'Chinese government coverup'. If there's no coverup, the deletion and republishing isn't notable (IMO). By considering it notable, we're implying the coverup allegation. Especially on this article about the origin. As such, we should either remove the text (not notable), shrink it (to merely the deletion and republishing, no mention of the preprint), and/or more directly address the allegation (as supported by RS, I'd suggest the mainstream view is that it's a nothingburger). If you don't like the phrasing of WP:PROFRINGE, then let's stick with WP:UNDUE which PROFRINGE directs us to: Giving due weight and avoiding giving undue weight means articles should not give minority views or aspects as much of or as detailed a description as more widely held views or widely supported aspects... Undue weight can be given in several ways, including but not limited to depth of detail, quantity of text, prominence of placement, juxtaposition of statements and use of imagery. In articles specifically relating to a minority viewpoint, such views may receive more attention and space. However, these pages should still make appropriate reference to the majority viewpoint wherever relevant and must not represent content strictly from the perspective of the minority view. Specifically, it should always be clear which parts of the text describe the minority view. In addition, the majority view should be explained in sufficient detail that the reader can understand how the minority view differs from it, and controversies regarding aspects of the minority view should be clearly identified and explained... To give undue weight to the view of a significant minority, or to include that of a tiny minority, might be misleading as to the shape of the dispute.
The lack of coverage to other minor investigatory topics on the article suggests it would be more in keeping with the rest of the article's DUE weight threshold not to include the topic. And if we do, it seems it should basically be to debunk the WP:SELFPUB's claims. Maybe I'm missing a major argument that the deletion and republication would be WP:DUE without relating it to a cover-up, but it seems most of the arguments in favor are related to that cover-up. Hence my suggestion that the section would at least need to be reworded so as not to give that impression (which would indeed be UNDUE and PROFRINGE inclusion of SELFPUB). Bakkster Man (talk) 15:07, 6 July 2021 (UTC)[reply]
You are still trying to work out WEIGHT by your own judgement. I don't agree that us considering the dispute notable (for now) we are implying there is truth in the cover up. The dispute among scientists is notable simply because reliable sources are covering it when discussing "Investigations into the origin of COVID-19". For example, Trump's comments about injecting ourselves with bleach were and remain an enduring aspect of the history of Covid-19 politics (though, fortunately, not medicine). I would imagine that would form part of any comprehensive article on that topic. I don't think any respected journalist reporting on it felt they were giving credence to the idea.
I wonder if it would help to try to look at the coverage as though they were reporting on something you really don't give a s**t about. Like something about the British royal family or a sport you don't even know the rules for. To make this talk page a lot less about what we as editors think about the deletion or the cover up or whether this might fade away or that Bloom is on a path to be Time Person of the Year 2021.
I also think we are overthinking this whole thing wrt DUE thresholds and being strict about policies. With a wiki we should be able to take a more agile approach to this, and I'm trying to suggest we be a bit more flexible wrt Covid lest we find our precious guidelines are wrecked by a mob. Regardless of all the WP:RULES, there will be readers coming to Wikipedia expecting us to cover this story, at least in July 2021 there will, and our text educates them briefly about the dispute, as well as providing reliable sources for them to read about it some more. That's our mission. Job done. At the same time, the huge pressure to mention "OMG scientist found smoking gun proving Chinese scientists deleted data as part of government cover-up" can be solved without being accused of censorship. We can say that, yes, we do cover that story, but here's what reliable sources think about it. -- Colin°Talk 16:14, 6 July 2021 (UTC)[reply]
I agree with agility. That's why I added the text originally. But agility should go both ways, adding and removing. "Well, it's in there now, we should keep it" is not agile.
The dispute among scientists is notable simply because reliable sources are covering it when discussing "Investigations into the origin of COVID-19". I continue to disagree strongly with this. See WP:VNOT. For instance we don't cover Li-Meng Yan on this page, despite considerable media attention. While I'm actually in favor of adding other, similarly notable (but minor) topics to this section of the article (which will help with DUE, by sharing the spotlight a bit more), I think you go to far by suggesting that mere news coverage makes a topic notable and due. Especially since WP:DUE applies as much to the quantity of text we give a topic (hence my preference for reduction, not elimination).
I also still hold that trying to appease the "OMG scientist found smoking gun proving Chinese scientists deleted data as part of government cover-up" crowd is a terrible strategy, as they won't ever be appeased. If you think policies and guidelines mean inclusion makes for the best article, that's fine. But bending policy to make the conspiracy theorists happy is the literal definition of WP:PROFRINGE... Bakkster Man (talk) 16:38, 6 July 2021 (UTC)[reply]
I don't think anyone is saying "Well, it's in there now, we should keep it". But I do think it is a little premature to be ditching it. WP:VNOT is very much agreeing that a single reliable source isn't enough to guarantee inclusion. If this was some exclusive story in the middle pages of the WSJ then we wouldn't be discussing it. But WP:VNOT doesn't tell editors how to figure out whether and where to include something. It links to several other policies, including WP:UNDUE which talks about how prominent this is among reliable sources. I'm not saying this is easy and Wikipedia is generally very cautious about including events that are briefly in the news. Nor am trying to appease "conspiracy theorists", but I also don't think labelling people "conspiracy theorists" is helpful. What we included isn't acceding to unreasonable demands any more than is giving a child demanding an ice cream an apple instead. And I'm not trying to bend policy either: at the top of our policy pages is a link to WP:COMMONSENSE, which I certainly think is worth a read.
Wrt prominence in reliable publication, the story has certainly peaked, but the NYT still includes Bloom's claims in its "Here’s what you need to know:" box. And Science Mag reworked their story on 2nd July. -- Colin°Talk 17:31, 6 July 2021 (UTC)[reply]

Bakkster Man I am not opposed to reducing and clarifying the text. I am opposed to the blatant WP:MISINTERPRETATION of our sources and the claims that Bloom’s findings aren’t significant or relevant to investigation into the virus. May I remind you that there are a number of very reputed scientists who are of the WP:OPINION that there isn’t enough data to determine whether the virus has natural origin or laboratory origin. If the virus does indeed turn out to be of laboratory origin, then Bloom’s findings will have been proven to be very significant and relevant at this time. CutePeach (talk) 14:05, 7 July 2021 (UTC)[reply]

I'll be much more inclined to agree on the significance and relevance once the paper has been peer reviewed and approved for publication. Until then, there arguably aren't any "findings" we can reliably source to Bloom (since it's WP:SELFPUB). Bakkster Man (talk) 14:14, 7 July 2021 (UTC)[reply]
CutePeach, you really need to keep your talk page discussions focused on actual article text and cite actual reliable sources, rather than just commenting generally and offering your opinion of the state of affairs. All the text in the paragraph is reliably sourced, as far as I can see. If there is text that is wrong or should be reworded, propose an alternative and give reliable sources. That's how it works. If you do continue to soapbox on these pages, then I think I shall be asking for admin intervention. It isn't productive to turn these pages into a forum where two sides debate Covid 19's origins for themselves. -- Colin°Talk 14:25, 7 July 2021 (UTC)[reply]
@Bakkster Man:, I hear you, but this case is similar to the Pangolin paper which did not provide any supporting data, which we have discussed before without resolution [106]. This is a matter of Data publishing, and many journals today require supporting data, yet the authors of these papers haven’t responded to anyone on why they deleted their sequence data. If Bloom’s paper passes peer review, it will mount pressure on the SMALL journal to retract Wuhan University researcher’s paper, which will give us another sentence to add. We will also have more to write about the phylogenetic analysis, but not more than a sentence, as it's not transformative. This incident shows how hungry the scientific community is for data, which the Chinese Government continues withholding, which is why I and other editors have countered other editors here claiming Bloom’s findings aren’t significant or relevant to the subject of this page. CutePeach (talk) 15:03, 7 July 2021 (UTC)[reply]
@Colin: perhaps you’ve missed parts of the discussion here about the WP:V of the phrase Thucydides411 added to the Independent Investigations part of the article, and the little "failed verification" tag that ProcrastinatingReader added to it? I would edit it out myself, but I don't want to get maligned and banned in ANI or ARE. This is a seriously egregious case of WP:OR which goes to show what the larger problem is here. CutePeach (talk) 15:03, 7 July 2021 (UTC)[reply]

Cnet article

The discussion of Covid 19 origins on wikipedia has made into news: https://www.cnet.com/features/inside-wikipedias-endless-war-over-the-coronavirus-lab-leak-theory Just a comment: we should have an article named "Wikipedia discussion war over the coronavirus lab leak theory" Sgnpkd (talk) 17:13, 26 June 2021 (UTC)[reply]

Strong oppose. We don't have an article on the basis of one RS, Wikipedia is not particularly significant on this issue, CNET is only reliable for tech-related articles, and we've (for content reasons) decided against various (otherwise notable) spinoff articles on this topic. Nice that Wikipedia has press coverage, but we don't need an article every time Wikipedia makes it into the news. ProcrastinatingReader (talk) 17:17, 26 June 2021 (UTC)[reply]
I concur with ProcrastinatingReader here. It's very rare that wiki-drama warrants a mention in an article, let alone an article dedicated to it. Moreover, this is outside of CNET's area of reliability. XOR'easter (talk) 17:47, 26 June 2021 (UTC)[reply]
The "relevant" article already exists at Wikipedia coverage of the COVID-19 pandemic - we can add a sentence or two about this there, if you deem it is warranted to do so. RandomCanadian (talk / contribs) 23:40, 26 June 2021 (UTC)[reply]
I don't think we can call CNET a reliable source for this topic (their area of expertise appears to be cellphone reviews and the Top 10 Things to Stream On Amazon Prime Tonight). If our back-channel forum drama is actually noteworthy, other publications will pick up on it. It's happened before on other topics, but I don't think we're there yet. XOR'easter (talk) 02:11, 27 June 2021 (UTC)[reply]

Last foreign scientist

1 TrangaBellam (talk) 04:06, 28 June 2021 (UTC)[reply]

An interesting source, even if I'm not sure what we'd use it for on this article. Good background context, though. I also added it to the misinformation article, since it included another description of threats related to misinformation. Thanks! Bakkster Man (talk) 13:30, 28 June 2021 (UTC)[reply]

Military connections of Wuhan lab scientists?

The NBC Evening News had a segment on Wuhan lab scientists' military connections on 6/29. See video here where they detail their evidence and state this is central to President Biden's current investigation. [107] This is mainstream media on the current investigation, so perhaps the topic merits coverage in the article? Pkeets (talk) 01:38, 30 June 2021 (UTC)[reply]

FYI, this is the same thing, same thread of accusation, as the "intelligence fact sheet" which was not actually an intelligence document, not a threat assessment. It was a political document, authored by politicians and other non-experts like David Asher, as far as I can ascertain. That's why we must treat it extremely carefully as it includes unproven unsubstantiated accusations of malfeasance for BLPs like Shi Zhengli. I understand what you're saying, but we do already cover this in the article. See Investigations_into_the_origin_of_COVID-19#Biden_administration.--Shibbolethink ( ) 01:50, 30 June 2021 (UTC)[reply]
@Shibbolethink: Please be mindful of WP:OR. The US State Department fact sheet was a very carefully vetted documented, and according to Ned Price, it remains the position of the current administration [108] [109] [110]. There is virtually no dispute about this. CutePeach (talk) 04:00, 30 June 2021 (UTC)[reply]
@CutePeach: WP:OR doesn't apply to talk pages. Re: the document, here are some relevant quotes from that WaPo article you just linked showing how much dispute there is:
"Therefore, the official said, [the fact sheet details] do not represent a fair and balanced representation of what the U.S. government knew about the coronavirus origins at the time. By focusing only on the lab, the fact sheet highlighted only the data points that supported the conclusion Pompeo wanted..."
"“From the start, the fact sheet was a State Department messaging document, rather than some sort of complete accounting or intelligence-driven analytic product,” the official said. “There was certainly not consensus [inside the U.S. government] on the still unproven theory that this emerged from the lab.”"
"the Biden State Department determined that some of the facts in the Jan. 15 statement are supported by either U.S. government information or public sources, a senior State Department official told me. But that doesn’t mean the Biden team is endorsing Trump’s or Pottinger’s assertion that the lab was probably involved."
It is not the official position statement of the US government, that's why Biden called for further investigation. To create such a statement down the road.--Shibbolethink ( ) 04:06, 30 June 2021 (UTC)[reply]
@Shibbolethink: granted WP:OR does not apply to talk pages, but we are discussing Pkeets’s proposed inclusion of NBC's report on an alleged link between the WIV and the PLA’s alleged Chinese biological weapons program. Ned Price’s on the record statements make these allegations official US government position, and that’s about as clear as the US government will ever be wrt bioweapons. The off the record statements from the anonymous source in WaPo can be quoted for WP:BALANCE where they are WP:DUE, but we should be mindful of WP:FALSEBALANCE. Please read the article in its entirety, as well as more recent articles, such as the one from Vanityfair [111] and the response from Christopher Ashley Ford [112]. CutePeach (talk) 04:59, 30 June 2021 (UTC)[reply]
@CutePeach: Where in that transcript you provided does Ned Price say that the fact sheet is, in its entirety, an official position statement of the US Government?--Shibbolethink ( ) 05:09, 30 June 2021 (UTC)[reply]
@Shibbolethink: just the fact that Price pointed to the sheet - instead of reversing its position as the Biden admin has on other issues [113] - makes it the current US government position. Making charges wrt bioweapons is not something governments do lightly, as they have to be filed as complaints as per Article VI of the BWC, and I don’t think the US government would want to do that. It's entirely possible that the Chinese biological weapons program is purely defensive in nature, so this is a sensitive and delicate matter and should be treated as such. As much as I enjoy our conversations, I suggest we focus on how to include the NBC report in this page. CutePeach (talk) 05:39, 30 June 2021 (UTC)[reply]
@CutePeach:Okay, well. I understand what you're saying, that certainly would make it more difficult to find an RS showing that a bioweapons program exists. So far, I personally have seen no actual WP:RS evidence that such a link exists. It doesn't matter how likely or unlikely a government is to say something explicitly, the requirement for WP:RSes is still the same.
I think for such an extremely controversial set of assertions (the US government's official position is that the Chinese government has a biowarfare program, and was operating it at the WIV), you'll probably need a lot more than the fact that a spokesperson pointed at a document to get to consensus on this.--Shibbolethink ( ) 05:46, 30 June 2021 (UTC)[reply]
@Shibbolethink: I do not think "WP:RS evidence" is a requisite policy for inclusion. If we see reports in WP:RS that the WIV conspired with Tikbalang to create COVID-19, then it would be WP:DUE for inclusion in this page - with WP:INTEXT attribution of course. If you want us to qualify the bioweapons allegation as first being made under the Trump administration, then that’s fine with me - but to say it has been taken back under the Biden administration is WP:OR. Btw, the fact sheet was not authored by Asher, but by several highly experienced State Department officials from across a number of divisions. It would have been impossible for Pompeo to get them to publish the sheet in his last few days if it was political in nature. Of all federal executive departments, the US State Department is the most resistant to political pressure, and Trump would often deride it as the "Deep State Department". CutePeach (talk) 06:26, 30 June 2021 (UTC)[reply]
@CutePeach: From your above linked sources: Price said the January 15 fact sheet was "very clear that it was inconclusive -- it didn't give credence to one theory over another." That's my concern, trying to turn an uncertain fact sheet into an "official gov't position" feels very 'gotcha' to me. Which, in turn, makes it hard to determine if there's actually an NPOV way to include it without its very inclusion ending up pushing a certain POV. Bakkster Man (talk) 13:08, 30 June 2021 (UTC)[reply]

@Bakkster Man: sorry, me and Shibbolethink got a bit carried away discussing the nuances of official US government position. We don’t have to cover these nuances in our mention of the NBC report. We now also have this CBS report on those military ties [114]. CutePeach (talk) 02:52, 1 July 2021 (UTC)[reply]

The CBS News article says that some US officials claim the lab has military ties, and it offers no evidence for this claim. This claim absolutely cannot be made in Wikivoice in any article, and is UNDUE in this article. -Thucydides411 (talk) 22:53, 1 July 2021 (UTC)[reply]
My very best wishes I read that integrated study a few years ago and I just created Chinese biological weapons program using your contributions from China and weapons of mass destruction. I hope that’s okay with the copyright policy. CutePeach (talk) 06:30, 30 June 2021 (UTC)[reply]
FYI the Wuhan Institute of Biological Products is not the same as the WIV, it just happens to be right next door. Sgnpkd (talk) 17:26, 30 June 2021 (UTC)[reply]
Yes, of course, it is not the same. That's the point. That is why I was always surprised why US intelligence (or whoever) were talking so much about this Wuhan lab. That could be just as easily any other lab (or labs) in Wuhan or elsewhere. I am sure there are many other labs in China capable of handling such virus. My very best wishes (talk) 22:53, 30 June 2021 (UTC)[reply]

Citing Shi Zheng-Li for the origin of COVID-19.

Due to her considerable conflict of interest, we should not cite a paper with Shi Zheng-Li's name on it for the origin of COVID-19. In addition to the conflict itself, we have the problem that the paper[115] does not disclose it. Adoring nanny (talk) 00:48, 1 July 2021 (UTC)[reply]

So because she is on the paper, you think we should not use it. Even if the editorial review process vetted the veracity of the paper's claims, and the peer reviewers agreed. And there's all the other authors on the paper as well. Do all of those people's opinions and verifications not matter? Because of what you perceive as a COI? Because you think one of the world's foremost experts on coronaviruses has a vested interest in finding potentially zoonotic coronaviruses in the wild? This is exactly what she was doing before the pandemic, and what she will be doing for many years to come. Finding bat viruses in the wild. She's good at it. It doesn't make it maleficent. I would also remind you that there is, as yet, no actual proof that Shi Zhengli has done anything wrong.--Shibbolethink ( ) 01:45, 1 July 2021 (UTC)[reply]
@Adoring nanny: Do you have a BLP-compliant, reliable source which unambiguously declares Zheng-Li has a conflict of interest? Without one, I don't think we can even begin to have this discussion. And even in that case, I'd suggest we'd want to see the change reflected in WP:SCHOLARSHIP sources, such as secondary papers describing it in that manner or the original paper being retracted for that reason.
I'd also mention, this logic would have us not citing Investigate the origins of COVID-19 in Science, because it was signed by members of The Cambridge Working Group who would also have 'considerable conflict of interest' in a lab origin. Bakkster Man (talk) 19:22, 1 July 2021 (UTC)[reply]
Re Shi, that's not needed per WP:BLUE. See in particular "Pedantry, and other didactic arguments" on that page. Adoring nanny (talk) 19:51, 1 July 2021 (UTC)[reply]
It isn't self-evident to me, and I would wager it is not self-evident to many of the other users here. I tend not to believe a COI exists unless I have concrete evidence of a conflicting incentive structure. In this case, I don't see anything beyond vague aspersions thinly cast.--Shibbolethink ( ) 19:54, 1 July 2021 (UTC)[reply]
Fine. The order said communication and publication of research had to be orchestrated like "a game of chess” under instructions from Xi, and propaganda and public opinion teams were to “guide publication.” It went on to warn that those who publish without permission, “causing serious adverse social impact, shall be held accountable.” [116]. Adoring nanny (talk) 20:00, 1 July 2021 (UTC)[reply]
The current state of the investigations on SARS-CoV-2 origin have not led to an official investigation in a court of law against the Wuhan Institute of Virology or Shi Zheng-Li. Therefore, we can not exclude the opinions and comments of Shi Zheng-Li on this page. However, I would suggest we use WP:COMMONSENSE when dealing with particular sentences, for instance, if her opinion departs signficantly from other RS we should always include both views instead of leaving her opinion alone. That said, we should probably start considering whether to improve the coverage of the allegations at Wuhan Institute of Virology, I'll may try it later today. Forich (talk) 20:01, 1 July 2021 (UTC)[reply]
Right. Shi has followed Chinese law, so she has not been investigated. But when people publish information contrary to Chinese law, we get things like this: Coronavirus: Why have two reporters in Wuhan disappeared? [117]. So the question becomes, is threat of enforced disappearance if one says the wrong thing sufficient to create a conflict of interest? That's where WP:BLUE comes in. Adoring nanny (talk) 20:06, 1 July 2021 (UTC)[reply]
The paper you removed is not primarily published by people at the WIV. It's primarily authored by people at Eco-Health Alliance. Authored by Americans and Europeans. WIV people were collaborators. Not the primary authors. So I have serious doubts that any interference from Xi Jinping was tolerated....--Shibbolethink ( ) 20:09, 1 July 2021 (UTC)[reply]
@Adoring nanny: I agree with Shibbolethink: there's only a conflict of interest regarding the origin of COVID-19 if she was somehow involved in the origin. And that's far from certain.
I'll also point out that you've cited no WP:PAG why such a COI (if it existed) would even prohibit our citing this paper. WP:RS only mentions COI regarding WP:NEWSORG and WP:SPONSORED, neither of which apply here.
Regarding WP:BLUE, there are cases where this kind of pedantic insistence is useful and necessary. I also propose WP:NOTBLUE applies here: if the journal didn't disclose a conflict, and hasn't retracted or otherwise noted such a conflict, then it is very much not obvious that one exists. Bakkster Man (talk) 20:11, 1 July 2021 (UTC)[reply]

I want to be clear, though-- I agree that citing Shi Zhengli alone for statements of fact about the lab leak, such as:

The lab leak did not occur. [Insert ref to an interview with Shi Zhengli]

would be wrong. Clearly she has a reason to say that, and it would be wrong to cite her for such a statement. I would agree with Forich on that point in particular. Where and when she diverges from mainstream scientific opinion, we can state as much. But in this instance, she doesn't. We're citing her paper as part of a multi-sourced statement about the existence of other coronaviruses found in bats. Many people who are not Shi Zhengli can confirm the veracity of that claim. It also matters how controversial the supported statement is (this one is not very, given how many sources we have that support it. It's very clear this is what most scientists think).

In accordance with PAGs, we also elevate sources that go through rigorous peer review and editorial filters to be published in well-regarded scientific journals. And that's what the source you removed is. Zhengli is a middle author, it's an overall research product, evaluated by many different eyes, and peer-reviewed. At that point, it becomes a useful secondary source, not a primary one. The farther we get from unevaluated opinion, and the closer we get to secondary review, the less such an association matters. And the less fair it is to call it a true COI.--Shibbolethink ( ) 20:04, 1 July 2021 (UTC)[reply]

Daszak's involvement is a further reason not to use the cite, in light of this: It soon emerged, based on emails obtained by a Freedom of Information group called U.S. Right to Know, that Daszak had not only signed but organized the influential Lancet statement, with the intention of concealing his role and creating the impression of scientific unanimity.[118] Adoring nanny (talk) 20:26, 1 July 2021 (UTC)[reply]
Adoring nanny, Okay, I disagree that Daszak has enough of a COI to invalidate the publication. And he definitely does not have enough of a COI in this to invalidate the ability for us to use this publication to answer "did they find coronaviruses in the wild?" and "Is this Nat Comm article useful in determining what most scientists think about the virus origin?" On both counts, the answers are yes.
On both counts, we have no reason to think a peer reviewed and editorially scrutinized publication in a very reputable journal is tainted in any substantial way, such that it is not useful in answering these questions.
And we actually discuss what other people think about his possible COI in the article already. But we also cover his opinions on the matter, I believe.--Shibbolethink ( ) 20:33, 1 July 2021 (UTC)[reply]
I'll add that there's a substantial difference between noting a perceived/apparent/alleged conflict of interest in the article (which we do for Daszak, last I checked) and refusing to cite an otherwise reliable source for perceived/apparent/alleged conflict of interest. Arguably, the latter might even end up acting like WP:CENSORSHIP. Bakkster Man (talk) 20:42, 1 July 2021 (UTC)[reply]
Concur with Bakkster Man, that is an extremely important distinction. And I want to make clear, this section is all COI assertions based on allegation alone. There is no proof that Daszak has actually done anything wrong enough to assume he is lying or committing malfeasance. A reasonable person could agree or disagree that Daszak should have disclosed a COI when signing the Lancet statement. Given that he himself is not a Chinese national, he owes very little if anything to the Chinese government, etc. etc. If China banned Daszak tomorrow, it would suck, but he would go on doing his job all the same. EHA has a metric TON of international collaborators.
As a personal anecdote: Before this pandemic, I knew and became friends with several people who worked for the EHA in New York (people who now have jobs elsewhere). Maybe 1/4 of them had any contact with Shi Zhengli's group at the WIV. And all 4 of them had multiple projects that were completely unrelated to China. Is the WIV a good collaborator and is Southern China an important place to look for Viral Zoonoses? Yes. But would EHA be completely fine if they were banned from entering China? Yes. EHA would focus more on Cambodian or Vietnamese bats, probably.--Shibbolethink ( ) 20:48, 1 July 2021 (UTC)[reply]
The difference is that Shi Zhengli is one of the world's foremost experts on bat coronaviruses and Deigin isn't even a virologist. The above discussion about disregarding research by Chinese scientists by virtue of them being Chinese is quite disturbing, in my opinion, and not a road we should go down. -Thucydides411 (talk) 22:47, 1 July 2021 (UTC)[reply]
The problem is not the fact that they are Chinese. It's the fact that the Government of China will disappear them if they say the wrong thing. I would have no issue with citing Taiwanese scientists, or American scientists of Chinese ethnicity, for example. Furthermore, I have no problem with citing them for the official position of the Government of China. But in light of Xi Jinping's direct threat above, they shouldn't be cited in WikiVoice. Adoring nanny (talk) 23:31, 1 July 2021 (UTC)[reply]
I'm against putting xenophobia into Wikipedia policy, as well as the suggestions that various internationally recognized experts (such as Daszak) should be discounted because they work with Chinese scientists. We should go on what passes peer-review in high-quality WP:MEDRS, rather than deciding that all Chinese scientists should just be discounted. I'm surprised and disappointed that we're even having this discussion. -Thucydides411 (talk) 07:36, 2 July 2021 (UTC)[reply]
It's not we who made the decision that 'communication and publication of research had to be orchestrated like "a game of chess”'. That type of orchestration is not science. Adoring nanny (talk) 09:13, 2 July 2021 (UTC)[reply]
Even accepting that the wording by ABC News is accurate (despite the prevalent anti-China bias in US news media these days), that still wouldn't mean that publications coming from the Wuhan institute are not science. During the course of the pandemic, the US CDC and other reputable sources have "orchestrated" their public messaging, usually with good intentions (although not always with good results). That does not mean that CDC publications are not science, and the same goes for publications from China. Wikipedia should be even-handed and should not take sides in the new Cold War between the US and China. NightHeron (talk) 10:02, 2 July 2021 (UTC)[reply]
ABC News is not more competent than the journal Nature to determine what is and is not good science. Shi Zhengli is one of the world's foremost researchers into bat coronaviruses. She did some of the critical work that determined the origins of SARS. We're not going to start overruling the publication decisions of expert peer-reviewers and editors at journals like Nature, based on some generalized argument that Chinese scientists are unreliable. -Thucydides411 (talk) 14:02, 2 July 2021 (UTC)[reply]
Like I said: her paper can be used and should be treated just as any other peer-reviewed publication. Same about the paper by Deigin et al. As about trusting her statements in interviews (usually conducted through email), this is a different question. That would be obviously affected by the Censorship in China and other aspects of people living under the communist regime, i.e. people may be forced to withhold information, etc. That affects scientific publishing. It appears from publications that China has something similar to Soviet "First Departments" which had to approve the release of any scientific publications on the matters deemed significant for state security. That does affect people and affects a lot. Just for the sake of example, let's consider Yuri Ovchinnikov who convinced Brezhnev to begin a large-scale program of Soviet biological weapons (according to book by Ken Alibek). During a competition with Har Gobind Khorana Ovchinnikov intentionally published an incorrect amino acid sequence (a peer reviewed publication), so that a competitor would spend some time to find out the reasons for disagreements. This is a story Ovchinnikov was telling his students. Of course it was a rare occasion, and for an important cause. But simply not publishing something (if it was deemed important by censors for "dual purposes") would be a lot more common. My very best wishes (talk) 16:55, 2 July 2021 (UTC)[reply]
Your insinuation that highly regarded Chinese scientists might be publishing fabricated data really has no place here. Enough is enough. -Thucydides411 (talk) 17:35, 2 July 2021 (UTC)[reply]
I am only saying that Chinese government controls scientific research and publishing, especially on this subject [119],[120], pretty much like USSR did it in the past. Obviously, any censored publications, including scientific ones, may be less reliable/trusted under such circumstances. It does not mean they can not be used. Same with personal interviews through emails, etc. My very best wishes (talk) 19:07, 2 July 2021 (UTC)[reply]
The problem with that logic is we can never verify it. If the publication was censored, we'd never know since it would have presumably been suppressed. And since it was published, that means it wasn't censored. So the papers we'd want to cite would never exist to cite, and the ones which do exist don't suffer from the original concern to need avoiding. "What about disinformation" I hear you say? Back to WP:V, we're going to reflect the mainstream view. If all reliable journals are intentionally suppressing contradictory studies, then we're going to base the article on that mainstream set of publications until either the journals or WP:PAG changes.
This whole discussion is silly, and a waste of time. Especially when we're talking about a paper signed by 15 scientists, rather than something primarily (or solely) authored by the person under discussion. This argument over (essentially) WP:IDONTLIKEIT has gone on too long. Bakkster Man (talk) 19:29, 2 July 2021 (UTC)[reply]
Verifiability is not the truth. If published in a reputable journal (as it was), this passes WP:V. That's why I am saying we can use it. Do I personally trust anything she said in interviews through emails? Of course not. My very best wishes (talk) 20:00, 2 July 2021 (UTC)[reply]
The focus of this discussion is moving from Shi Zheng-Li to our treatment of academic sources from Chinese scientists under pressure from the Chinese government. The appropiate venues would be, on content, Censorship_in_China#Health and Censorship_in_China#Education, where appropiate RS sources describing what is allegedly being censored (or self-censored) should be mentioned. Given that censored stuff is, well, usually hidden from public knowledge, we should consider that whenever a specific scientific journal publishes papers that i) show evident signs of manipulation by Chinese authorities; ii) is accused by many RS of having being manipulated by Chinese authorities; we bring the discussion to Wikipedia:Reliable sources/Noticeboard, with a case by case basis of how to deal with the bias introduced in the source (deprecation is one remedy, but there could be other workarounds). Forich (talk) 22:11, 2 July 2021 (UTC)[reply]

Removal of the phrase "conspiracy theories" from the lede

I move that this term at the very least be removed from the first paragraph. As a precedent we can look to Earth#Size_and_shape for example. There is no mention of Flat earth. The primary importance of this article is to document legitimate inquiry. "Conspiracy theory" is not a major factor in the process of legitimate inquiry and hence should be left out of the lede. Any talk of "conspiracy theory" could potentially be saved for a controversy section and link to other existing COVID-19 pages.KristinaLu (talk) 01:50, 1 July 2021 (UTC)[reply]

I disagree. The conspiracy theories are a major component of the origin investigations. Your precedent is more suitable for the COVID-19 and COVID-19 Pandemic articles, where we don't mention the conspiracy theories in the lede. I think the more apt comparison is History of geodesy. Bakkster Man (talk) 13:27, 1 July 2021 (UTC)[reply]
I agree that your comparison is more apt. However, History of geodesy doesn't mention conspiracy theories in the lede. If we were contemporary to Pythagoras, we would not be referring to the flat disc of Homer as a "conspiracy theory". Again, the origin of SARS-CoV-2 is an open question and needs to be treated as such here.KristinaLu (talk) 21:24, 2 July 2021 (UTC)[reply]
KristinaLu, WP:V is the pertinent PAG here. We follow what other people say, not what we think is the "truth." And lots of other people talk about conspiracy theories related to the origins of the virus. So that's why we mention it. It is analogous as to why "flat earth" is mentioned in the lead of History of geodesy. The specific phrase "conspiracy theory" is not as important as the content itself. Both this article and that article discuss dissenting views, and frame those views in how experts discuss them, proportional to how often they are discussed that way. That's WP:DUE for you. Is it always right? No. But it tends to be right more often than it is wrong. That's why Wiki policy is built this way.--Shibbolethink ( ) 21:27, 2 July 2021 (UTC)[reply]
Neither WP:V nor WP:DUE point to the term "conspiracy theories" being used in the very short first paragraph of this article. Maybe it could be included later in the lede, but it should not be juxtaposed in such a way to lead the reader towards WP:OR ie. that any hypothesis besides non-laboratory zoonotic origin constitutes a "conspiracy theory". This may be your personal opinion, but as per WP:NPOV and WP:VOICE we report what sources say not our opinions about them, and we should avoid stating opinions as facts.KristinaLu (talk) 00:05, 3 July 2021 (UTC)[reply]
I also disagree. Linking to COVID-19 misinformation in the lead is essential, and the current wording seems fine. User:力 (power~enwiki, π, ν) 00:11, 3 July 2021 (UTC)[reply]
Is it possible to keep the link to COVID-19 misinformation somewhere in the without using the phrase "conspiracy theories" in the first paragraph? We have so many highly notable experts now on record (Ralph S. Baric, David Baltimore, Robert R. Redfield, David Relman etc.) that in order to be in line with WP:NPOV and WP:DUE care should be taken to not write off all hypotheses besides "natural zoonotic origin" as "conspiracy theories".KristinaLu (talk) 02:38, 3 July 2021 (UTC)[reply]
If only there were a stand-alone lab leak article, you could mention Several other explanations, including a lab leak from the Wuhan Institute of Virology and a variety of conspiracy theories, have been proposed about the origins of the virus. User:力 (power~enwiki, π, ν) 03:02, 3 July 2021 (UTC)[reply]
How about this:
"Most scientists say that the virus is likely of zoonotic origin in a natural setting, from bats or another mammal, although complete investigations into other explanations have been encouraged by experts. The origin of the virus has also been the topic of many conspiracy theories."
One sentence for science, a separate sentence for conspiracy theories.KristinaLu (talk) 08:57, 3 July 2021 (UTC)[reply]
I agree. The way the lede is written clearly relegates the lab leak theory to conspiracy status. Pkeets (talk) 01:49, 3 July 2021 (UTC)[reply]
That's my main point, I hope it was clear for others.KristinaLu (talk) 02:32, 3 July 2021 (UTC)[reply]
I agree. The so-called conspiracy theory is a valuation without empirical evidence. Only if we would have a proof here, which verifies this surely, one can carry out a valuation strong scientifically. It is only purely subjective evaluation - nothing more.--Empiricus (talk) 15:49, 5 July 2021 (UTC)[reply]
First choice would be to remove the phrase "conspiracy theories". Without clicking through to the references, it's not even clear what it is referring to. Adoring nanny (talk) 22:53, 5 July 2021 (UTC)[reply]
So COVID has not been the subject of conspiracy theories about its origins? Do you happen to live on planet Denial? Here's a small serving of reliable sources, all across the spectrum (recent and not so recent, from national organisations, high quality and lesser quality academic journals, to mainstream newspapers et al.), which indicate that in this case, your statements couldn't be further divorced from what is verifiable in reliable sources, and that there has indeed been many "conspiracy theories" and "speculation" about this: [121][122][123][124][125][126][127][128][129]. That and all the other sources cited in the misinformation article and at the NOLABLEAK page. In short, as some kind of people like to say, facts and logic prove that your position is, unambiguously, incorrect. RandomCanadian (talk / contribs) 03:43, 7 July 2021 (UTC)[reply]
These sources are outdated, except for the new LANCET letter - there is nothing there about conspiracy theory.. We referred to the laboratory theory alone and this, even in science (see Lancet Letter) is no longer a conspiracy theory. Your "old interpretations" are now a fringing position, which is perhaps still relevant in China - but no longer in the Western world, neither in science, the WHO, nor in states nor in the public.--Empiricus (talk) 09:17, 7 July 2021 (UTC)[reply]
These sources aren't outdated. They demonstrate, beyond a doubt, that at some point in time, the origins of the virus were [still are] subject to conspiracy theories. Are you denying the statement "the origins of COVID have been the subject of conspiracy theories"? RandomCanadian (talk / contribs) 12:02, 7 July 2021 (UTC)[reply]
A statement can be true but still WP:UNDUE. Adoring nanny (talk) 12:27, 7 July 2021 (UTC)[reply]

New Republic Article from June 29

I don't think we use this one yet, it's pretty good. [130]

Written by Lindsay Beyerstein. Covers the lab leak theory inside and out, from the perspective of scientists and why the consensus is the way it is. There isn't much in here that isn't already in our article, though. So I'm just gonna add it to bolster up non-MEDRS non-SCHOLARSHIP sentences that have become controversial, that it also addresses.

WP:RSP calls TNR generally reliable for long read journalism like this.Shibbolethink ( ) 03:47, 2 July 2021 (UTC)[reply]

I think if we are going to start accepting 'long read journalism' then there is not a consistent argument against such journalism from other reliable media outlets. I would prefer to stick to the best sources we have, which is the peer-reviewed scholarship, on the more substantial points. Especially since this source is biased and opinionated (per RSP). I don't mind having it as a link in the "External links" section, or for sourcing the especially political aspects of the issue. ProcrastinatingReader (talk) 15:56, 2 July 2021 (UTC)[reply]
1) RSP says opinion pieces from this outlet are opinionated, but that isn't what this source article is. It isn't an opinion piece, it's a descriptive one. It shows us, through a secondary lens, why a bunch of scientists don't believe the lab leak theory. 2) I'm not saying we should use them for controversial statements, I agree we should only use them for EXTREMELY uncontroversial statements that are also covered elsewhere. I have not put this source anywhere where scientific evidence is being cited, except where the citation is to say "an Expert believes X thing" because it's an interview with several experts. Does that make sense? I would analogize this to the WSJ piece about hospitalized workers. I want to be very clear about how I'm using this, because I agree, it's a very complex area and very grey in a lot of ways. I don't want to rock the boat to start introducing lots of journalism pieces here. It would be counter-productive in controversial places. This source just helps us understand what experts think about this situation. And it is one of only a few sources that reference the annual serum sampling at the WIV, so I cited it for that as well. Just to say it happened, not that it proved anything.--Shibbolethink ( ) 16:04, 2 July 2021 (UTC)[reply]
Unfortunately, "longform journalism" also includes stuff like the Nicholson Baker piece, which I think it best not included. Hemiauchenia (talk) 16:23, 2 July 2021 (UTC)[reply]
The BAS where that's published is not a reliable source, and that essay is an opinion piece. Different from this New Republic piece in that very important way. Again, not sourcing this for anything disputed (e.g. it is also never the only source cited).--Shibbolethink ( ) 16:29, 2 July 2021 (UTC)[reply]
You're getting confused. The BAS piece was Nicholas Wade, I am referring to the long-form journalism piece entitled The Lab-Leak Hypothesis in New York (magazine) from January. On further reflection, the direct quotes from Rasmussen and Robert F. Garry are probably usable. Hemiauchenia (talk) 16:35, 2 July 2021 (UTC)[reply]
Hemiauchenia, You're absolutely right I was confusing the two. And agreed, that piece is highly opinionated and masquerades as longform journalism in the same way this one does. I'll make sure that we're only using this TNR piece for the quotes, and put that in the ref template.--Shibbolethink ( ) 16:47, 2 July 2021 (UTC)[reply]
It's a good article to read for discussion of evidence against a lab leak, but it should be used in a similar way to the Nicholas Wade piece; that is to say sparingly, and not at all for contentious biomedical claims. User:力 (power~enwiki, π, ν) 00:15, 3 July 2021 (UTC)[reply]

Please comment on the reliability of the podcast "This Week in Virology" to source information about this page. The discussion is at Wikipedia:Reliable_sources/Noticeboard#"This_Week_in_Virology"_(TWIV)_Podcast. Forich (talk) 20:03, 2 July 2021 (UTC)[reply]

Closure from the RFC on MEDRS vs RS

An uninvolved editor closed this RFC which I think is relevant to edit this entry.

After considering the best point of that discussion, the closing editor came up with this rule:

MEDRS level

  • How a disease spreads
  • What changes a disease likelihood to spread
  • A disease mutation information
  • The details concerning a naturally-ocurring medicine

Examples: How Ibuprofen is synthesized, What a disease does to a living organism, any information on the contagiousness of a disease

RS level

  • Who created something
  • Where something was created
  • If something was discovered by accident (like the stimulating properties of Viagra)
  • If something is found as the result of targeted research
  • Who first discovered a naturally ocurring medicine or where

Example: A medicine was discovered by Stewart Adams and John Nicholson in the 1960s while working at Boots UK Limited

This rule gives a little less ambiguity to sort what information requires MEDRS or RS, let's adhere to it as it is the best we have. Forich (talk) 22:13, 3 July 2021 (UTC)[reply]

Forich, Agreed. I was pleasantly surprised with this closure personally, it's basically how I felt about MEDRS versus RS. Of course, we cannot forget the importance of WP:SCHOLARSHIP, which for example, tells us that history and virology publications in peer reviewed journals are more important than newspaper sources in determining the state of the world in Wikipedia's eyes. I think that was also something that broadly got lost in that discussion, we don't really need to use MEDRS, because SCHOLARSHIP tells us what we need to know for the purposes of this article's extremely frequent disputes.--Shibbolethink ( ) 01:54, 4 July 2021 (UTC)[reply]

Talk page consensus on high-quality "Lab Leak" sources

According to the [template] for this page, [> this is where to find the following discussion:] In prior discussions of several manuscripts authored by Rossana Segreto and/or Yuri Deigin, editors have found the sources to be unreliable. Specifically, editors were not convinced by the credentials of the authors, and concerns were raised with the editorial oversight of the BioEssays "Problems & Paradigms" series. I couldn't find any cohesive consensus so I'm moving the discussion here. I can think of several sources that are conspicuously missing from this article.

  • Segreto & Deigin "The genetic structure of SARS-CoV-2 does not rule out a laboratory origin: SARS-COV-2 chimeric structure and furin cleavage site might be the result of genetic manipulation" Bioessays
  • Segreto et al "Should we discount the laboratory origin of COVID-19?" Env Chem Lett
  • Sirotkin K, Sirotkin D. "Might SARS-CoV-2 Have Arisen via Serial Passage through an Animal Host or Cell Culture?: A potential explanation for much of the novel coronavirus' distinctive genome" Bioessays

And most importantly,

  • Bloom et al "Investigate the origins of COVID-19" Science

Even if carefully included as primary sources, these articles have been referenced in one way or another across many forms of media in order to justify them being included in the article. With mainstream experts including Ralph S. Baric, David Baltimore, Jonathan Latham and Allison Wilson Robert R. Redfield and David Relman all calling for more investigations things are to the point where this article at the least needs to acknowledge that such sources exist. I of course expect everything to be in line with WP:DUE, WP:FRINGE etc. as far as how claims are introduced to the article. By WP:FRINGE, it is of vital importance that they simply restate what is said by independent secondary sources of reasonable reliability and quality. There are plenty of secondary sources now. These are only hypotheses being discussed, not truth claims. KristinaLu (talk) 03:09, 4 July 2021 (UTC)[reply]

Cherrypicking sources that agree with what you wish to be included, while ignoring the dozens of other, much better sources, that give credence to not including - this does not help build an encyclopedia. Not to mention that the three sources you give first are no more than editorials published in whichever journal would take them. Nobody is arguing that some people don't believe in the lab leak. However, the scientific consensus, as demonstrated by a plethora of sources already in the article here, is that it is extremely unlikely. So you're right - we must consider DUE and FRINGE - and adding any credence to the lab leak hypothesis based on the sources you provide is not in line with DUE or FRINGE. These are not secondary sources anyways - they're all "essays" or "opinion" pieces - which are only valid on Wikipedia for the opinions of the authors - which are not DUE weight to include here. Yes, you're correct that the sources are "conspicuously missing" - because it is not due weight to repeat every single person's opinion on the matter. Being referenced by others does not make it any less of an opinion/editorial piece - and does not suddenly mean we can ignore that fact when deciding to include or not. -bɜ:ʳkənhɪmez (User/say hi!) 03:16, 4 July 2021 (UTC)[reply]
Well, I'm not "cherry-picking sources I agree with" so that's not an issue. This article is unbalanced based on the current opinions of experts. That's the issue.
You are incorrect. There is no scientific consensus that it is "extremely unlikely". Just because one is the less likely of two scenarios doesn't make it somehow non-existent. That's not how hypothesis works, and it's not Wikipedia's job to "pick a winner". The entire article is based on natural zoonotic origin (for which there is currently zero evidence). Based on WP:DUE at this point a lab escape scenario deserves a balanced (not equal) mention.
There are many secondary sources now. The fact that we now have Ralph S. Baric, David Baltimore, Robert R. Redfield and David Relman should be more than enough to shoot down any immature notion that there is some "consensus" and scientific questions are akin to winning prom king, whoever is most popular goes in Wikipedia. Surely there has to be some degree of nuance allowed when dealing with open questions.KristinaLu (talk) 03:42, 4 July 2021 (UTC)[reply]
No, it's not our job to "pick a winner", but when the vast majority of scientists consider something the winner, then DUE and WEIGHT (which you referenced, so I'll assume you read) apply. Individual people expressing their opinions is not a secondary source. You keep talking about "many secondary sources", but all you've presented are a bunch of primary/opinion sources. And no, 4 scientists you can name does not mean there still isn't a consensus among the hundreds of thousands of other scientists in the world. That's exactly what I mean by "cherry picking" - you are saying "well these four people say one thing, so we should ignore everyone else". Four peoples' opinion is rarely due for expressing on the same level as the opinion of hundreds of thousands of others. -bɜ:ʳkənhɪmez (User/say hi!) 04:19, 4 July 2021 (UTC)[reply]
Now I am curious. If you did not select those four sources because they agree with you, why did you select them? What was the criterion for including Segreto et al, but not including other papers missing from the article? Such as:
  • Morens et al, "The origin of COVID-19 and why it matters" [131]
  • Zhang et al: "Strategies to trace back the origin of COVID-19" [132]
  • Alanagreh et al: "The human coronavirus disease COVID-19: its origin, characteristics, and insights into potential drugs and its mechanisms" [133]
Those are the first three hits in a Google Scholar search for "origin covid virus" [134].
And your logic concerning the "extremely unlikely" thing is also weird. How does "extremely unlikely" turn into "somehow non-existent"? I am accustomed to this type of logic from creationists who say mutations cannot lead to evolution because beneficial mutations are rare - they turn the "rare" into "nonexistent" the same way you do.
Regarding the "mainstream experts": let's just wait until they have done studies that confirm their opinions, shall we? Wikipedia traditionally only clucks when the egg has been laid, not before. Or, in other words, WP:RS and WP:CRYSTAL. --Hob Gadling (talk) 12:07, 4 July 2021 (UTC)[reply]
We mention the Bloom et al letter to the editor in the reactions to the WHO report section. We also mention Ralph Baric's thoughts in that section as an expert, independent of the bloom et al letter of which he is a co-author. Relman is cited twice, once as senior author on the Bloom et al letter and also in this transcluded SARS-COV-2 section. We also cite the bloom letter in one of those SARS-COV-2 sections as well, under reservoir and origin. Both the Relman opinion piece and the Bloom et al letter have been through editorial review of a topic relevant journal but not peer-review, and are accordingly cited for statements of uncontroversial fact and also for expert opinion in due weight. David Baltimore's opinion is the most describable as WP:FRINGE among those listed (based on a lack of inclusion in scientific peer-reviewed publications or even in editorial-reviewed opinion pieces). I would put it closest to Deigin and Segretto who have not been published in any relevant topic-area journals or mentioned or cited in expert peer-reviewed review articles. They are the least deserving of weight. I have a great respect for some of Dr. Baltimore's achievements (and abhor his misconduct [135]), but he is far from the first or the only current Nobel prize winner to be on the fringe. At least he walked back his statements a little bit [136]. But doesn't make them any more WP:DUE. Personally I don't think we need any more inclusion of these sources than we already have.--Shibbolethink ( ) 03:24, 4 July 2021 (UTC)[reply]
The point of the template is to stop sinking time with these discussions repeatedly. While it doesn't stop people making them, so long as the template is honest and neutral, it's an effective resource for editors to just point to the relevant numbered issue. I couldn't find every discussion where this was discussed, but even from the linked ones it's clear every time this has been brought up editors disagreed with calling these RS. The WP:SOURCE policy says the credentials of the author affect the reliability of the work. Given that (IIRC) Segreto is a botanist, and Deigin is an entrepreneur, I'm surprised this was even debated in the first place -- neither has credentials in virology. ProcrastinatingReader (talk) 12:58, 4 July 2021 (UTC)[reply]
ProcrastinatingReader, without disagreeing with your main point, I would like to point out that the claim that Segreto is a botanist is entirely false, and is sourced to an editor who made other similarly false claims about scientists who have made comments supporting the lab leak hypothesis. Segreto is in fact a biotechnologist, using the same technology virologists do to create fungal mutants, so she is more than qualified to be cited for her findings - which are very significant. I will also point out that Deigin’s father is a reputed scientist at the Russian Academy of Sciences, so though he has had a good knowledge of the subject from an early age, I agree that papers authored by him alone may not qualify for citation in accords to WP:SOURCE, but he is credited with a number of findings in numerous secondary sources - which are also very significant. I will make a list of all the DRASTIC findings that I think are worthy of inclusion under the section Independent Investigations of our article. Both Segreto and Deigin’s findings have been widely reported in secondary sources, so let’s not get hung up in the red herring that is these primary sources. CutePeach (talk) 13:51, 7 July 2021 (UTC)[reply]
Are DRASTIC getting peer review? Bakkster Man (talk) 14:04, 7 July 2021 (UTC)[reply]
DRASTIC members are credited with things like discovering the Mojian miners' PHD theses, which was - in large- what started the debate on the lab leak possibility, and Fauci recently called on China to release their medical records [137]. If debris of Malaysia Airlines Flight 370 washed up on a beach in Australia, would we need to wait for peer reviewed studies, or would reliable sources be enough to cover the story? CutePeach (talk) 14:26, 7 July 2021 (UTC)[reply]
And yes, several DRASTIC members have gotten peer review in several journals, in case you were unaware. CutePeach (talk) 14:36, 7 July 2021 (UTC)[reply]
The PhD thesis would be the actual finding, and Fauci isn't a member of DRASTIC. Flight 370 comparisons would be odd, since it seems unlikely they'd be directly contradicting existing peer-reviewed research to see a similar application of WP:SCHOLARSHIP.
Out of curiosity, did that WIV live bats thing that DRASTIC "discovered" ever get independently verified? Bakkster Man (talk) 14:40, 7 July 2021 (UTC)[reply]
@CutePeach: And yes, several DRASTIC members have gotten peer review in several journals, in case you were unaware. Why didn't you lead with this? When you go off on tangents about Fauci and Flight 370 instead of answering the original question, it comes across as if it were POV-pushing. I don't want to presume you are, but you make it very hard not to come to that conclusion with troubling frequency. Bakkster Man (talk) 14:43, 7 July 2021 (UTC)[reply]
@CutePeach: which of their publications were published? Can we add a section to DRASTIC, titled "Publications" or some such, with a list of them? ProcrastinatingReader (talk) 14:53, 7 July 2021 (UTC)[reply]
Bloom et al is already cited, as I'm sure a second look at the article will confirm for you. The previous consensus here has mostly been that BioEssays and Environmental Chemistry Letters weren't reliable for the topic. Primarily since they seem to be lacking peer review and/or were published outside of journals directly related to biology/virology (implying their WP:FRINGE/ALT status). I'm probably less opposed than some others on including them, however if we do include them we need to be very clear that these are contrarian, non-mainstream, less-reliable views. I suggest that if you have a strong disagreement on inclusion, that you seek outside input from someplace like WP:RS/N and link that discussion here. Bakkster Man (talk) 13:26, 6 July 2021 (UTC)[reply]

Okay, Drbogdan, you got me. This is my last one before a wikibreak. I probably won't respond, but I was the revert so I will go ahead and start the BRD in your stead. By all means I welcome everybody else here to discuss without me, I'm just starting it.

You have restored with further reliance on the two citations from a collaboration with Ralph S. Baric and a quote that describes how the work occurred, but not where. Ultimately, when you run this down, it is describing how the Baric lab created mutant viruses, not the Zhengli lab at the WIV. See these relevant quotes from the Christian Science Monitor: [138]

  • "In a U.S.-funded study published in 2015, Dr. Baric, using virus sequences provided by Dr. Shi, created a hybrid version of a bat coronavirus that showed the potential to infect humans. The NIH had approved the study, but it raised eyebrows among some scientists. UNC’s School of Public Health said in emails to the Monitor that there was no gain of function and the hybrid virus was not sent to China."
  • "Dr. Fauci repeatedly and emphatically denied the senator’s assertions. “With all due respect, you are entirely incorrect,” he said. “The NIH has not ever and does not now fund gain-of-function research in that [Wuhan] institute.”"
  • "Scientists don’t agree on how exactly to define gain-of-function research, but generally it involves enhancing a pathogen to make it more virulent or transmissible. Critics say the NIH is using a narrow interpretation of what counts as gain of function, and has not provided ample transparency into the grant review process for such research."

So clearly this is a controversial claim, that should rely on more robust sourcing than two primary research articles which depict collaborations where the actual reverse genetics experiments were conducted in the US. Can you provide secondary review articles or RSes which demonstrate that it's an accepted fact among relevant experts that "WIV was conducting gain-of-function research on coronaviruses" ? If not, any such claims should probably be duly weighted and put in attribution from relevant people like Dr. Relman.--Shibbolethink ( ) 18:26, 4 July 2021 (UTC)[reply]

@Shibbolethink: (and others) - re: Gain-of-function research (GoFR) reverted edit (+cited refs)[1][2] - Seems the following recent references in Scientific American[3] and MIT Technology Review[4] may be relevant to the discussion I would think - there may be more such references as well - iac - Stay Safe and Healthy !! - Drbogdan (talk) 18:45, 4 July 2021 (UTC)[reply]

New Lancet letter

Update from last year's letter. [139] Bakkster Man (talk) 16:41, 6 July 2021 (UTC)[reply]

Very interesting. With the new letter, the conspiracy theory is dead in the western world. The authors no longer speak of its existence. We should delete the conspiration saga in all related WP articles. It's history. If there is any evidence of the laboratory hypothesis - these scientists would run the risk of sustaining massive reputational damage not only concerning their research and personal reputation - also for science at all. The German magazine Spiegel published a very large cover story on the Wuhan Institute this week. --Empiricus (talk) 21:35, 6 July 2021 (UTC)[reply]
We believe the strongest clue from new, credible, and peer-reviewed evidence in the scientific literature is that the virus evolved in nature, while suggestions of a laboratory-leak source of the pandemic remain without scientifically validated evidence that directly supports it in peer-reviewed scientific journals.Novem Linguae (talk) 01:24, 7 July 2021 (UTC)[reply]
It´s the old argument with "scientific literature" - but there is no empirical evidence. As long as the transmission animal has not been found, there is no evidence. Sure, the laboratory-leak has also no validated evidence (until now) but the serious difference is that the authors can no longer exclude this hypothesis or discriminate the laboratory option as a conspiracy theory. This position is history with the new letter.--Empiricus (talk) 08:43, 7 July 2021 (UTC)[reply]
This sentence massively relativizes the old letter: "Careful and transparent collection of scientific information is essential to understand how the virus has spread and to develop strategies to mitigate the ongoing impact of COVID-19, whether it occurred wholly within nature or might somehow have reached the community via an alternative route, and prevent future pandemics."--Empiricus (talk) 08:53, 7 July 2021 (UTC)[reply]
the old argument with "scientific literature" is still good. It is to be found in WP:RS too: When available, academic and peer-reviewed publications, scholarly monographs, and textbooks are usually the most reliable sources
Your WP:OR about empirical evidence is worthless in Wikipedia. We go with RS. --Hob Gadling (talk) 11:16, 7 July 2021 (UTC)[reply]
Just because it has always been the case does not mean that it is the case now. For laboratory accidents e.g. with SARS there is a lot of evidence in the literature or e.g. Marburg, etc.. The origin question can only be answered by empirical evidence - scientific, also in Wikipedia. Otherwise, we would not need any investigations, which everyone also the Lancet Group - is demanding now. It´s not WP:OR - it´s simply science.--Empiricus (talk) 13:11, 7 July 2021 (UTC)[reply]
@Empiricus-sextus: With the new letter, the conspiracy theory is dead in the western world. The authors no longer speak of its existence. We should delete the conspiration saga in all related WP articles. Related purely to the WHO-evaluated lab-origin (WIV gathers bat viruses, accidental infection of staff), I agree. But there are other conspiracy theories which are still very much conspiracy theories per reliable sources.
  • The conspiracy theory it was being developed by WIV as a bioweapon
  • The conspiracy theory it was being developed at Fort Detrick as a bioweapon
  • The conspiracy theory the virus was manufactured so to promote the sale of vaccines
  • The conspiracy theory Bill Gates asked them to manufacture the virus to control the world's population
And those are just the conspiracy theories relating to a laboratory origin (add meteorites and 5G). So while we need to carefully word to not imply every lab origin is a conspiracy theory, there remain lab origin scenarios accurately described as conspiracy theories. Bakkster Man (talk) 13:16, 7 July 2021 (UTC)[reply]
I agree, but this are studip fring theories -like the frozen food thesis - without any public relevance, that's not even worth talking about. Maybe only as missinformation. It will be very interesting to see what the Biden report says about the laboratory, since a senior official, China's deputy security minister, is said to have deserted to the United States. --Empiricus (talk) 14:50, 7 July 2021 (UTC)[reply]
I agree, but this are studip fring theories -like the frozen food thesis - without any public relevance, that's not even worth talking about. Stupid? Absolutely! "Without public relevance"? Seems pretty relevant to me if multiple US representatives are repeating the bioweapon claim.[140][141][142] Bakkster Man (talk) 15:01, 7 July 2021 (UTC)[reply]
The addendum adding Peter Daszak's conflicts of interest to the original Lancet letter is revealing. A bit more than a year late High Tinker (talk) 14:52, 7 July 2021 (UTC)[reply]

Centralized discussion on MEDRS vs NEWSORG on the origin of SARS-CoV-2

I've begun a Centralized discussion on MEDRS vs NEWSORG on the origin of SARS-CoV-2. Please visit, read, and comment there. Forich (talk) 21:49, 6 July 2021 (UTC)[reply]
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