User:IB1usea/Books/IT for Bioinformatics

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IT for Bioinformatics[edit]

Bioinformatics
Bioformatics Fondation
.NET Bio
3D-Jury
ABCD Schema
ABCdb
Accession number (bioinformatics)
Adaptive sampling
Syed I. Ahson
Align-m
Alignment-free sequence analysis
AMAP
AMPHORA
ANOVA–simultaneous component analysis
Applied Maths
Archaeopteryx (evolutionary tree visualization and analysis)
Arlequin
ArrayTrack
AstridBio
Attack rate
Aureus Sciences
Automated species identification
Awards in Bioinformatics and Computational Biology
Base calling
Basel Computational Biology Conference
BASys
Bayesian inference in phylogeny
Benjamin Franklin Award (Bioinformatics)
Biclustering
Binarization of consensus partition matrices
Binning (Metagenomics)
Biochip
Bioclipse
Bioconductor
BioCreative
Biocurator
Bioimage informatics
Bioinformatics Open Source Conference
Bioinformatics workflow management system
Bioinformetrics
BioJava
BioJS
BioLinux
Biological data
Biological data visualization
Biological database
Biological network
Biological network inference
Biomax Informatics AG
Biomedical Informatics Research Network
Biomedical text mining
Biomimetics
BioMOBY
BioPAX
BioPerl
Biopunk
Biopython
BIOSCI
BioSearch
Biositemap
Biostatistics
BISC (database)
BLOSUM
BMC Bioinformatics
Boolean network
Bottom-up proteomics
Brain mapping
C+-probability
CaBIG
CAFASP
CaGrid
CAMEO3D
Canadian Bioinformatics Workshops
CASP
CAZy
Cellular model
Center for Bioinformatics and Computational Biology
CERF (software)
ChEMBL
Chemical library
Chemistry Development Kit
ChIP-exo
ChIP-on-chip
Chou's invariance theorem
Chou–Fasman method
CLC bio
Clone manager
CloudBioLinux
Clustal
CodonCode Aligner
Community Cyberinfrastructure for Advanced Microbial Ecology Research and Analysis
COMPLEAT (Bioinformatics tool)
Complex systems biology
Computational and Statistical Genetics
Computational biology
Computational epigenetics
Computational genomics
Computational immunology
Computational Resource for Drug Discovery
Computer Atlas of Surface Topology of Proteins
Consed
Consensus sequence
Conserved sequence
Contact order
Roger Craig (Jeopardy! contestant)
Critical Assessment of Function Annotation
CS-BLAST
CSHALS
Darwin Core
Darwin Core Archive
Data curation
DAVID (bioinformatics tool)
De novo protein structure prediction
De novo transcriptome assembly
Debian-Med
Demographic and Health Surveys
Dendroscope
Digital transcriptome subtraction
Disease gene identification
Diseases Database
Distance matrix
Distributed Annotation System
Distributed Annotation System/Clients
DNA barcoding
DNA binding site
DNA microarray
DNA microarray experiment
DNA Patterns
Peak calling
DNA sequencing theory
Docking (molecular)
Dot plot (bioinformatics)
Dry lab
Dual-flashlight plot
Enzyme Commission number
ELIXIR
EMAGE
EMBOSS
EMBRACE
Empire (program)
Ensembl
Ensembl Genomes
Eukaryotic Linear Motif resource
Eurocarbdb
European Conference on Computational Biology
European Data Format
European Nucleotide Archive
EVA (benchmark)
Evolution@Home
ExPASy
EzTaxon Database
Fast statistical alignment
FASTA
FASTA format
FastContact
FastPCR
FASTQ format
Flow cytometry bioinformatics
FlowJo
Flux balance analysis
Fluxomics
Folding@home
Foldit
FoldX
Foundational Model of Anatomy
Gap penalty
GC skew
Gemini Somatics
Gene co-expression network
Gene Designer
Gene Disease Database
Gene nomenclature
Gene ontology
Gene Ontology Term Enrichment
Gene prediction
Gene set enrichment
GeneNetwork
GenePattern
General Data Format for Biomedical Signals
General feature format
Generic Model Organism Database
GeneRIF
GenMAPP
GenoCAD
Genomatix
Genome@home
Genome survey sequence
Genome-based peptide fingerprint scanning
Genomespace
GENSCAN
German Resource Center for Genome Research
GFP-cDNA
GLIMMER
Global distance test
Global Public Health Intelligence Network
Glycoinformatics
GoPubMed
GOR method
Haar-like features
Heat map
Hidden Markov model
Hierarchical Editing Language for Macromolecules
High-performance Integrated Virtual Environment
HMMER
HomoloGene
Homology modeling
Horizontal correlation
HubMed
Human Proteinpedia
Hybrid genome assembly
Hypothetical protein
I-TASSER
Identifiers.org
Imaging cycler microscopy
Imaging informatics
In silico PCR
Infologs
Information Hyperlinked over Proteins
Integrated Genome Browser
Integrated Microbial Genomes System
Integrative bioinformatics
Intelligent Systems for Molecular Biology
Interaction network
Interactome
Interferome
International Meeting on Computational Intelligence Methods for Bioinformatics and Biostatistics
International Protein Index
Interolog
ISCB Senior Scientist Awards
ITools Resourceome
K-mer
KiSAO
KOBIC
LabKey Server
Legume Information System
Arthur M. Lesk
Linguistic sequence complexity
List of bioinformatics companies
List of bioinformatics institutions
List of bioinformatics journals
List of biological databases
List of databases for oncogenomic research
List of free online bioinformatics courses
List of Intelligent Systems for Molecular Biology keynote speakers
List of Master of Science in Bioinformatics
List of molecular graphics systems
List of omics topics in biology
List of phylogenetic tree visualization software
List of phylogenetics software
List of Y-DNA single-nucleotide polymorphisms
LiveBench
Long non-coding RNA database
Loop modeling
Louis and Beatrice Laufer Center for Physical and Quantitative Biology
LSID
Macromolecular docking
MacVector
MAGMA (Molecular Animation, Graphics and Modeling Application framework)
MaMF
MANET database
Manhattan plot
List of mass spectrometry software
Matthews correlation coefficient
MAVID
Medical library
Medical literature retrieval
Medical Subject Headings
List of MeSH codes
MEME suite
Metabolic network modelling
Metabolome
Metabolomics
MetaboMiner
Metagenomics
Metallome
MicrobesOnline
MicroRNA and microRNA target database
Minimotif Miner
Minimum information required in the annotation of models
Minimum Information Standards
MiRBase
MIRIAM Registry
Mobile Patient Diary
MochiView
Modelling biological systems
Models of DNA evolution
Molecular modelling
Morphometrics
MOWSE
Multiple displacement amplification
Multiple EM for Motif Elicitation
Multiple sequence alignment
Multiscale Electrophysiology Format
MyGrid
N50 statistic
National Center for Genome Resources
National Institute for Mathematical and Biological Synthesis
Shamkant Navathe
Netherlands Bioinformatics for Proteomics Platform
Neuroinformatics
NeuroLex
New York Genome Center
Newbler
Nextbio
NeXtProt
Nexus file
NIAID ChemDB
NoeClone
NoePrimer
Nuclear Receptor Signaling Atlas
Ontology engineering
Ontology for Biomedical Investigations
Open Biomedical Ontologies
Open Regulatory Annotation Database
OpenMS
The OpenMS Proteomics Pipeline
Overton Prize
Ovid Technologies
PANTHER
ParaSurf
PathVisio
Patrocladogram
PatternHunter
Peptide sequence
Peptide-mass fingerprint
Personal genomics
Pfam
Pharmacoinformatics
Phenome
PHI-base
Phrap
Phylogenetic profiling
Phyloscan
PhyloXML
Pileup format
Planted motif search
Point accepted mutation
Position weight matrix
Power graph analysis
Precision and recall
Predictprotein
Premier Biosoft
PRINTS
ProbCons
PROSITE
ProtCID
Protein family
Protein fragment library
Protein function prediction
Protein Information Resource
List of protein secondary structure prediction programs
Protein structure prediction
Protein subcellular localization prediction
Protein–DNA interaction
Protein–protein interaction
Protein–protein interaction prediction
Protein–protein interaction screening
Proteogenomics
Proteome
Proteomics
ProteoWizard
Protomap (proteomics)
PubGene
Pubget
Quasi-median networks
Quertle
Receiver Operating Characteristic Curve Explorer and Tester
Regulome
Representative sequences
Research in Computational Molecular Biology
Researchsome
Retro screening
RNA integrity number
RNA-binding protein database
Rosetta@home
Scaffolding (bioinformatics)
SCHEMA (bioinformatics)
Scoring functions for docking
Searching the conformational space for docking
Paola Sebastiani
Secretomics
Semantic integration
Sensitivity and specificity
SeqCorator
Sequence alignment
Sequence analysis
Sequence assembly
Sequence clustering
Sequence database
Sequence logo
Sequence motif
Sequence Ontology
Sequence profiling tool
Sequence Read Archive
Sequential Pattern Mining
Sequential structure alignment program
Sequerome
SEQUEST
ShiftX
Short Oligonucleotide Analysis Package
Shotgun proteomics
Shredding (disassembling genomic data)
SILVA ribosomal RNA database
Silverquant
Sim4
Similarity matrix
Simulated growth of plants
Single molecule real time sequencing
Snagger
SNP annotation
SNP array
Social sequence analysis
Society for Mathematical Biology
SOEing PCR
Software for protein model error verification
Software for protein structure visualization
SOSUI
Staden Package
Statistical coupling analysis
Statistical potential
Stochastic context-free grammar
Stockholm format
Substitution matrix
Substitution model
Sulston score
Suspension array technology
Swiss-model
Synteny
Synthetic biology
Systems biology
Systems Biology Ontology
Systems biomedicine
Systems immunology
T-Coffee
TargetScan
TDR Targets
Template modeling score
The Genomic HyperBrowser
Threading (protein sequence)
TimeLogic
Top-down proteomics
Toponome
Toponomics
Trans-Proteomic Pipeline
TRANSFAC
Translational research informatics
Uberon
UCSC Genome Browser
Uniform Sequence Address
UniFrac
UniProt
UPGMA
Variant Call Format
Vector NTI
VectorBase
Venn program
Vertebrate and Genome Annotation Project
Victorian Life Sciences Computation Initiative
Viral metagenomics
Viroinformatics
Virtual screening
Volcano plot (statistics)
Volume Area Dihedral Angle Reporter
WAVe
Webtag (software)
Weighted correlation network analysis
Whole genome sequencing
World Health Imaging, Telemedicine, and Informatics Alliance
WormBase
WormBook
Xenobiology
Yass (software)
Z curve
Bioinformatics software
Abalone (molecular mechanics)
Affymetrix GeneChip Operating Software
2D gel analysis software
List of alignment visualization software
AliView
AlleleID
Anduril (workflow engine)
ANGIS
BAli-Phy
BALL
Beacon designer
Bellerophon program
BioBIKE
BioExtract
Bioinformatic Harvester
BioNumerics