|Type||Public (NASDAQ: ILMN)|
|Headquarters||San Diego, California, U.S.|
|Revenue||$331.00 million (Q1 2013)|
Illumina, Inc. is an American company incorporated in April 1998 that develops, manufactures and markets integrated systems for the analysis of genetic variation and biological function. Using its technologies, the company provides a line of products and services that serve the sequencing, genotyping and gene expression markets. Customers include genomic research centers, pharmaceutical companies, academic institutions, clinical research organizations and biotechnology companies. Its tools provide researchers with the capability to perform genetic tests needed to extract medical information from advances in genomics and proteomics. Its headquarters are located in San Diego, California.
Illumina was founded in April 1998 by David Walt, Ph.D., Larry Bock, John Stuelpnagel, D.V.M., Anthony Czarnik, Ph.D., and Mark Chee, Ph.D. While working with CW Group, a venture capital firm, Larry and John uncovered what would become Illumina's BeadArray technology at Tufts University and negotiated an exclusive license to that technology. Illumina completed its initial public offering in July 2000.
Illumina began offering single nucleotide polymorphism (SNP) genotyping services in 2001 and launched its first system, the Illumina BeadLab, in 2002, using GoldenGate Genotyping technology. Illumina currently offers microarray-based products and services for an expanding range of genetic analysis sequencing, including SNP genotyping, gene expression, and protein analysis. Illumina's technologies are used by a broad range of academic, government, pharmaceutical, biotechnology, and other leading institutions around the globe.
On January 26, 2007, the Company completed the acquisition of Hayward based Solexa, Inc. Solexa was founded in June 1998 by Shankar Balasubramanian, Ph.D. and David Klenerman Ph.D. to develop and commercialize genome sequencing technology invented by the founders in the University of Cambridge. The technology is being used to perform a range of analyses, including whole genome resequencing, gene expression analysis and small ribonucleic acid (RNA) analysis.
In June 2009, Illumina announced the launch of their own Personal Full Genome Sequencing Service at a depth of 30X for $48,000 per genome, and a year later dropped the price to $19,500. This is still too expensive for true commercialization but the price will most likely decrease substantially over the next few years as they realize economies of scale and given the competition with other companies such as Complete Genomics and Knome. As of May 2011[update], Illumina reduced the price to $4,000.
On January 25, 2012, Hoffmann-La Roche made an unsolicited bid to buy Illumina for $44.50 per share or about $5.7 billion.Roche tried other tactics, including raising its offer (to $51.00, for about $6.8 billion).
 Future innovations & direction
Illumina is one of the primary players in the race to commercialize full genome sequencing. They have approached this initiative over the last couple of years through licensing deals, such as with Oxford Nanopore Technologies, M&As of other companies (such as Solexa in 2006), and heavy reinvestment of profits into its own R&D. Illumina is reportedly utilizing nanopore technology licensed from Oxford Nanopore Technologies to enable their full genome sequencing. It is unknown whether Illumina will provide their service only through their own San Diego-based laboratory or if they will sell a platform capable of full genome sequencing to other laboratories. Other companies involved in the race to commercialize full genome sequencing are Life Technologies, Pacific Biosciences, and Complete Genomics. Life Technologies recently demonstrated complete human genome sequencing, with 17x coverage, in a single run with its SOLiD Sequencer. Complete Genomics has stated that they will be able to offer a $5,000 full genome sequencing service by the summer of 2009. Illumina's CEO, Jay Flatley, stated in February 2009 that "A complete DNA read-out for every newborn will be technically feasible and affordable in less than five years, promising a revolution in healthcare" and that "by 2019 it will have become routine to map infants' genes when they are born". By June 2009, they had launched their own full genome sequencing service called Every Genome at a price of $48,000 per genome. As of May 2011, Illumina reduced the price to $4,000.
 DNA methylation profiling
 Golden Gate Methylation
The GoldenGate Methylation Cancer Panel allows the user to probe 1,505 CpG loci selected from 807 genes across a large sample size. The array based method allows 96 samples to be probed simultaneously on one array matrix.
 Infinium methylation
Utilizing Illumina's HumanMethylation27 DNA Analysis BeadChip and the Infinium technology, this method allows the user to map single methylation resolution for 27,578 CpG sites across over 14,000 genes.
 DNA sequencing
Illumina sells a number of very high-throughput DNA sequencing systems, also known as DNA sequencers, based on technology developed by Solexa. The technology features bridge amplification to generate clusters and reversible terminators for sequence determination.  The technology behind these sequencing systems involves ligation of fragmented DNA to a chip, followed by primer addition and sequential fluorescent dNTP incorporation and detection.
 Every Genome
Full genome sequencing service is sold solely through health care professionals (not direct to consumer).
- Everygenome.com: Individual genome sequencing - Illumina, Inc
- Kerry Dolan (2010-09-16). Illumina CEO On The Lunch That Launched Him. Forbes.
- Daniel MacArthur (2009-06-11). "Illumina launches personal genome sequencing service for $48,000". Scienceblogs.com.
- Kevin Davies (2009-06-11). "Illumina To Offer $48,000 Personal Genome Sequencing Service". Bio-IT world.
- Illumina drops sequencing price to $4,000 | UTSanDiego.com
- Everygenome.com: Individual genome sequencing - Illumina, Inc
- Roche - Roche offers to acquire all outstanding shares of Illumina, Inc. to further strengthen its leading role in diagnostics
- Five Reasons Illumina Should Fight Roche's Insulting Low-Ball Bid | Xconomy
- Illumina and Oxford Nanopore Enter into Broad Commercialization Agreement (Illumina press release 2009-01-19)
- Andrew Pollack (2006-11-14). "A DNA Chip Maker Acquires Gene-Sequencing Company". New York Times.
- Scientists from Applied Biosystems First to Sequence Entire Human Genome in Single Run at 17-fold Coverage Life Technologies Corporation press release, 2009-05-05
- The SOLiD™ System: Next-Generation Sequencing
- Erika Check Hayden (2008-10-06). "$5,000 genome next year, company promises". Nature News.
- Peter Aldhous (2009-02-06). "Genome sequencing falls to $5000". New Scientist.
- Mark Henderson (2009-02-09). "Genetic mapping of babies by 2019 will transform preventive medicine". Sunday Times.
- S Balasubramanian RSC Chem. Commun., 47 (26), 7281-7286 (2011)
- Bentley, David R.; et al. (6 November 2008). "Accurate whole human genome sequencing using reversible terminator chemistry". Nature 456 (7218): 53–59. doi:10.1038/nature07517.
- Illumina's Company Website
- DNAVision - Illumina official service provider.
- Gene Logic - performs research based on Illumina's Golden gate assay
- Illumina's Personal Full Sequencing Genome Service
- National Center for Genome Resources (NCGR) Sequencing Center - an Illumina Certified Service Provider.