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Ras superfamily

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H-Ras structure PDB 121p, surface colored by conservation in Pfam seed alignment: gold, most conserved; dark cyan, least conserved.
Identifiers
SymbolRas
PfamPF00071
InterProIPR013753
PROSITEPDOC00017
SCOP25p21 / SCOPe / SUPFAM
OPM protein1uad
CDDcd00882
Available protein structures:
Pfam  structures / ECOD  
PDBRCSB PDB; PDBe; PDBj
PDBsumstructure summary
PDB2folA:13-174 1ukvY:10-171 1yznA:10-171

2bcgY:10-171 1g17B:22-182 1g16C:22-182 3rabA:24-185 1zbdA:24-185 2ew1A:11-172 1x3sA:10-171 1z0kA:10-171 2bmeA:10-171 2bmdA:10-171 1yu9A:10-171 2aedA:13-174 1z0fA:13-174 1z0aD:8-169 2a5jA:8-169 1oivB:13-172 1yzkA:13-174 1oixA:13-172 1oiwA:13-172 1z06A:35-201 1huqA:23-182 1z0dC:23-183 1z07A:23-182 1r2qA:22-183 1n6rA:22-183 1ek0A:9-173 1yvdA:7-168 1z0jA:7-168 2fg5A:7-168 1z08A:21-182 1yztB:21-182 1yzuB:21-182 1z0iA:21-182 1yzqA:15-176 1d5cA:13-172 1t91C:10-175 1vg8D:10-175 1vg9H:10-175 1vg1A:10-175 1vg0B:10-175 1ky3A:10-178 1ky2A:10-178 1yzlA:9-174 1wmsB:9-174 1s8fB:9-174 2f7sA:11-183 1z22A:11-171 1z2aA:11-171 1plj :5-165 1ctqA:5-165 1crp :5-165 821p :5-165 2eryB:16-177 2fn4A:31-192 1x1sA:15-177 1x1rA:15-177 1u90A:16-177 1u8zA:16-177 1u8yB:16-177 1uadB:16-177 2bovA:16-177 2a78A:16-177 3rapR:5-166 1kao :5-166 2rap :5-166 1c1yA:5-167 1guaA:5-167 1xtrA:8-169 1xtqA:8-169 1xtsA:8-169 2erxB:9-171 1a4rB:5-178 1kmqA:7-180 1tx4B:7-179 1cxzA:7-180 1m7bA:25-199 1gwnA:25-199 2bkuA:12-170 3ranA:12-170 1qg4B:12-170 1byuA:12-170

2atvA:8-169

The Ras superfamily is a protein superfamily of small GTPases, which are all related, to a degree, to the Ras protein subfamily (the key human members of which are KRAS, NRAS, and HRAS).

There are more than a hundred proteins in the Ras superfamily.[1] Based on structure, sequence and function, the Ras superfamily is divided into five main families (Ras, Rho, Ran, Rab and Arf GTPases).[2] The Ras family itself is further divided into 6 subfamilies: Ras, Ral, Rit, Rap, Rheb, Rad and Rit. Miro is a recent contributor to the superfamily. Each subfamily shares the common core G domain, which provides essential GTPase and nucleotide exchange activity.

The surrounding sequence helps determine the functional specificity of the small GTPase, for example the 'Insert Loop', common to the Rho subfamily, specifically contributes to binding to effector proteins such as WASP.

In general, the Ras family is responsible for cell proliferation: Rho for cell morphology, Ran for nuclear transport, and Rab and Arf for vesicle transport.[3]

Subfamilies and members

The following is a list of human proteins belonging to the Ras superfamily:[1]

Overview
Subfamily Function Members
Ras cell proliferation [3] DIRAS1; DIRAS2; DIRAS3; ERAS; GEM; HRAS; KRAS; MRAS; NKIRAS1; NKIRAS2; NRAS; RALA; RALB; RAP1A; RAP1B; RAP2A; RAP2B; RAP2C; RASD1; RASD2; RASL10A; RASL10B; RASL11A; RASL11B; RASL12; REM1; REM2; RERG; RERGL; RRAD; RRAS; RRAS2
Rho cytoskeletal dynamics/morphology[3] RHOA; RHOB; RHOBTB1; RHOBTB2; RHOBTB3; RHOC; RHOD; RHOF; RHOG; RHOH; RHOJ; RHOQ; RHOU; RHOV; RND1; RND2; RND3; RAC1; RAC2; RAC3; CDC42
Rab membrane trafficking RAB1A; RAB1B; RAB2; RAB3A; RAB3B; RAB3C; RAB3D; RAB4A; RAB4B; RAB5A; RAB5B; RAB5C; RAB6A; RAB6B; RAB6C; RAB7A; RAB7B; RAB7L1; RAB8A; RAB8B; RAB9; RAB9B; RABL2A; RABL2B; RABL4; RAB10; RAB11A; RAB11B; RAB12; RAB13; RAB14; RAB15; RAB17; RAB18; RAB19; RAB20; RAB21; RAB22A; RAB23; RAB24; RAB25; RAB26; RAB27A; RAB27B; RAB28; RAB2B; RAB30; RAB31; RAB32; RAB33A; RAB33B; RAB34; RAB35; RAB36; RAB37; RAB38; RAB39; RAB39B; RAB40A; RAB40AL; RAB40B; RAB40C; RAB41; RAB42; RAB43
Rap cellular adhesion RAP1A; RAP1B; RAP2A; RAP2B; RAP2C
Arf vesicular transport[3] ARF1; ARF3; ARF4; ARF5; ARF6; ARL1; ARL2; ARL3; ARL4; ARL5; ARL5C; ARL6; ARL7; ARL8; ARL9; ARL10A; ARL10B; ARL10C; ARL11; ARL13A; ARL13B; ARL14; ARL15; ARL16; ARL17; TRIM23, ARL4D; ARFRP1; ARL13B
Ran nuclear transport RAN
Rheb mTOR pathway RHEB; RHEBL1
RGK RRAD; GEM; REM; REM2
Rit RIT1; RIT2
Miro mitochondrial transport RHOT1; RHOT2

Unclassified:

See also

References

  1. ^ a b Wennerberg K, Rossman KL, Der CJ (March 2005). "The Ras superfamily at a glance". J. Cell. Sci. 118 (Pt 5): 843–6. doi:10.1242/jcs.01660. PMID 15731001.{{cite journal}}: CS1 maint: multiple names: authors list (link)
  2. ^ Goitre, L; Trapani, E; Trabalzini, L; Retta, SF (26 December 2013). "The Ras superfamily of small GTPases: the unlocked secrets". 1120: 1–18. doi:10.1007/978-1-62703-791-4_1. PMID 24470015. Retrieved 2 January 2015. {{cite journal}}: Cite journal requires |journal= (help)
  3. ^ a b c d Munemitsu S, Innis M, Clark R, McCormick F, Ullrich A, Polakis P. (1990). "Molecular cloning and experssion of a G25K cDNA, the human homolog of the yeast cell cycle gene CDC42". Mol Cell Biol. 10 (11): 5977–82. ISSN 0270-7306. PMC 361395. PMID 2122236.{{cite journal}}: CS1 maint: multiple names: authors list (link)