Vinculin

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Vinculin
Protein VCL PDB 1qkr.png
PDB rendering based on 1qkr.
Available structures
PDB Ortholog search: PDBe, RCSB
Identifiers
Symbols VCL ; CMD1W; CMH15; MVCL
External IDs OMIM193065 MGI98927 HomoloGene7594 GeneCards: VCL Gene
RNA expression pattern
PBB GE VCL 200931 s at tn.png
PBB GE VCL 200930 s at tn.png
More reference expression data
Orthologs
Species Human Mouse
Entrez 7414 22330
Ensembl ENSG00000035403 ENSMUSG00000021823
UniProt P18206 Q64727
RefSeq (mRNA) NM_003373 NM_009502
RefSeq (protein) NP_003364 NP_033528
Location (UCSC) Chr 10:
75.76 – 75.88 Mb
Chr 14:
20.93 – 21.03 Mb
PubMed search [1] [2]
See also: Vinculin family

In mammalian cells, vinculin is a membrane-cytoskeletal protein in focal adhesion plaques that is involved in linkage of integrin adhesion molecules to the actin cytoskeleton. Discovered independently by Benny Geiger[1] and Keith Burridge,[2] its sequence is 20%-30% similar to α-catenin, which serves a similar function.

Binding alternately to talin or α-actinin, vinculin's shape and, as a consequence, its binding properties are changed. The vinculin gene occurs as a single copy and what appears to be no close relative to take over functions in its absence. Its splice variant metavinculin (see below) also needs vinculin to heterodimerize and work in a dependent fashion.

Vinculin is a cytoskeletal protein associated with cell-cell and cell-matrix junctions, where it is thought to function as one of several interacting proteins involved in anchoring F-actin to the membrane. Multiple alternatively-spliced transcript variants have been found for this gene, but the biological validity of some variants has not been determined. Human vinculin protein exhibits a greater-than-95% sequence identity to the chicken vinculin protein.[3]

Structure[edit]

Vinculin is a 117-kDa cytoskeletal protein with 1066 amino acids. The protein contains an acidic N-terminal domain and a basic C-terminal domain separated by a proline-rich middle segment. Vinculin consists of a globular head domain that contains binding sites for talin and α-actinin as well as a tyrosine phosphorylation site, while the tail region contains binding sites for F-actin, paxillin, and lipids (Goldman et al. 2001).

Essentially, there is an 835 amino acid N-terminal head, which is split into four domains. This is linked to the C-terminal head with a linker region.

Conformation[edit]

The recent discovery of the 3D structure sheds light on how this protein tailors its shape to perform a variety of functions. For example, vinculin is able to control the cell’s motility by simply altering its shape from active to inactive. When in its ‘inactive’ state, vinculin’s conformation is characterized by the interaction between its head and tail domains. And, when transforming to the ‘active’ form, such as when talin triggers binding, the intramolecular interaction between the tail and head is severed. In other words, when talin’s binding sites (VBS) of α-helices bind to a helical bundle structure in vinculin’s head domain, the ‘helical bundle conversion’ is initiated, which leads to the reorganization of the α-helices (α1- α-4), resulting in an entirely new five-helical bundle structure. This function also extends to cancer cells, and regulating their movement and proliferation of cancer to other parts of the body.

Mechanism and Function[edit]

Background

Cell spreading and movement occur though the process of binding of cell surface integrin receptors to extracellular matrix adhesion molecules. Vinculin is associated with focal adhesion and adherens junctions, which are complexes that nucleate actin filaments and crosslinkers between the external medium, plasma membrane, and actin cytoskeleton[4](Xu et al. 1998). The complex at the focal adhesions consists of several proteins such as vinculin, α-actin, paxillin, and talin, at the intracellular face of the plasma membrane.

In more specific terms, the amino-terminal of vinculin binds to talin, which, in turn, binds to β-integrins, and the carboxy-terminal binds to actin, phospholipids, and paxillin-forming homodimers. The binding of vinculin to talin and actin is regulated by polyphosphoinositides and inhibited by acidic phospholipids. The complex then serves to anchor actin filaments to the membrane[5](Ezzell et al. 1997).

The loss of vinculin impacts a variety of cell functions; it disrupts the formation of the complex, and prevents cell adhesion and spreading. The absence of the protein demonstrates a decrease in spreading of cells, accompanied by reduced stress fiber formation, formation of fewer focal adhesions, and inhibition of lamellipodia extension[6] (Goldman et al. 2001). It was discovered that cells that are deficient in vinculin have growth cones that advance more slowly, as well as filopodia and lamellipoida that were less stable than the wild-type. Based on research, it has been postulated that the lack of vinculin may decrease cell adhesion by inhibiting focal adhesion assembly and preventing actin polymerization. On the other hand, overexpression of vinculin may restore adhesion and spreading by promoting recruitment of cytoskeletal proteins to the focal adhesion complex at the site of integrin binding[5](Ezzell et al. 1997). Vinculin's ability to interact with integrins to the cytoskeleton at the focal adhesion appears to be critical for control of cytoskeletal mechanics, cell spreading, and lamellipodia formation. Thus, vinculin appears to play a key role in shape control based on its ability to modulate focal adhesion structure and function.

Vinculin binding site[edit]

VBS
PDB 1rkc EBI.jpg
human vinculin head (1-258) in complex with talin's vinculin binding site 3 (residues 1944-1969)
Identifiers
Symbol VBS
Pfam PF08913
InterPro IPR015009

Vinculin binding sites are predominantly found in talin and talin-like molecules, enabling binding of vinculin to talin, stabilising integrin-mediated cell-matrix junctions. Talin, in turn, links integrins to the actin cytoskeleton. The consensus sequence for Vinculin binding sites is LxxAAxxVAxxVxxLIxxA, with a secondary structure prediction of four amphipathic helices. The hydrophobic residues that define the VBS are themselves 'masked' and are buried in the core of a series of helical bundles that make up the talin rod.[7]

Splice variant: Metavinculin[edit]

Smooth muscles and skeletal muscles (and probably to a lower extent in cardiac muscle) in their well-differentiated (contractile) state co-express (along with vinculin) a splice variant carrying an extra exon in the 3' coding region, thus encoding a longer isoform meta-vinculin (meta VCL) of ~150KD molecular weight — a protein whose existence has been known since the 1980s.[8] Translation of the extra exon causes a 68- to 79-amino acid acid-rich insert between helices I and II within the C-terminal tail domain. Mutations within the insert region correlate with hereditary idiopathic dilated cardiomyopathy[9]

Length of the insert in metavinculin is 68AA in mammals 79 in frog. Strasser et al.[10] compared metavinculin sequences from pig, man, chicken, and frog, and found the insert to be bipartite: the first part variable and the second highly conserved.

Both vinculin isoforms co-localize in muscular adhesive structures, such as dense plaques in smooth muscles, intercalated discs in cardiomyocytes, and costameres in skeletal muscles.[11] Metavinculin tail domain has a lower affinity for the head as compared with the vinculin tail. In case of metavinculin, unfurling of the C-terminal hydrophobic hairpin loop of tail domain is impaired by the negative charges of the 68-amino acid insert, thus requiring phospholipid-activated regular isoform of vinculin to fully activate the metavinculin molecule.

Interactions[edit]

Vinculin has been shown to interact with SORBS1,[12] CDH1[13][14] and Paxillin.[15][16][17]

References[edit]

  1. ^ Geiger,B. 130K Protein from Chicken Gizzard - Its Localization at the Termini of Microfilament Bundles in Cultured Chicken-Cells. Cell 18, 193-205 (1979).
  2. ^ Burridge,K. & Feramisco,J.R. Microinjection and localization of a 130K protein in living fibroblasts: a relationship to actin and fibronectin. Cell 19, 587-595 (1980).
  3. ^ "Entrez Gene: VCL vinculin". 
  4. ^ Xu, W.; Baribault, H.; Adamson, E.D. (1998). "vinculin knockout results in heart and brain defects during embryonic development". Development 125 (2): 327–337. PMID 9486805. 
  5. ^ a b Ezzell RM, Goldmann WH, Wang N, Parasharama N, Ingber DE. (1997). Vinclin promotes cell spreading by mechanically coupling integrins to the cytoskeleton. Experimental Cell Research. 231(1):14-26.
  6. ^ Goldmann, W.H.; Ingber, D.E. (2001). "Intact vinculin protein is Require for control of cell shape, cell mechanics, and rac-Dependent Lamellipodia Formation". Biochemical and Biophysical Research Communications 290 (2): 749–755. doi:10.1006/bbrc.2001.6243. PMID 11785963. 
  7. ^ Gingras AR, Vogel KP, Steinhoff HJ, Ziegler WH, Patel B, Emsley J, Critchley DR, Roberts GC, Barsukov IL (February 2006). "Structural and dynamic characterization of a vinculin binding site in the talin rod". Biochemistry 45 (6): 1805–17. doi:10.1021/bi052136l. PMID 16460027. 
  8. ^ JR Feramisco, JE Smart, K Burridge, DM Helfman, and GP Thomas Co-existence of vinculin and a vinculin-like protein of higher molecular weight in smooth muscle J. Biol. Chem. 257: 11024-11031.
  9. ^ Sebastian Witt, Anke Zieseniss, Ulrike Fock, Brigitte M. Jockusch, and Susanne Illenberger Comparative Biochemical Analysis Suggests That Vinculin and Metavinculin Cooperate in Muscular Adhesion Sites J. Biol. Chem. 279: 31533-31543.
  10. ^ Strasser, P.; Gimona, M.; Herzog, M.; Geiger, B.; Small, J. V. : Variable and constant regions in the C-terminus of vinculin and metavinculin: cloning and expression of fragments in E. coli. FEBS Lett. 317: 189-194, 1993. PubMed ID : 8425604
  11. ^ Belkin, A. M., Ornatsky, O. I., Glukhova, M. A., and Koteliansky, V. E. (1988) J. Cell Biol. 107, 545–553
  12. ^ Mandai, K; Nakanishi H; Satoh A; Takahashi K; Satoh K; Nishioka H; Mizoguchi A; Takai Y (March 1999). "Ponsin/SH3P12: an l-afadin- and vinculin-binding protein localized at cell-cell and cell-matrix adherens junctions". J. Cell Biol. (UNITED STATES) 144 (5): 1001–17. doi:10.1083/jcb.144.5.1001. ISSN 0021-9525. PMC 2148189. PMID 10085297. 
  13. ^ Hazan, R B; Kang L; Roe S; Borgen P I; Rimm D L (December 1997). "Vinculin is associated with the E-cadherin adhesion complex". J. Biol. Chem. (UNITED STATES) 272 (51): 32448–53. doi:10.1074/jbc.272.51.32448. ISSN 0021-9258. PMID 9405455. 
  14. ^ Hazan, R B; Norton L (April 1998). "The epidermal growth factor receptor modulates the interaction of E-cadherin with the actin cytoskeleton". J. Biol. Chem. (UNITED STATES) 273 (15): 9078–84. doi:10.1074/jbc.273.15.9078. ISSN 0021-9258. PMID 9535896. 
  15. ^ Turner, C E; Brown M C; Perrotta J A; Riedy M C; Nikolopoulos S N; McDonald A R; Bagrodia S; Thomas S; Leventhal P S (May 1999). "Paxillin LD4 motif binds PAK and PIX through a novel 95-kD ankyrin repeat, ARF-GAP protein: A role in cytoskeletal remodeling". J. Cell Biol. (UNITED STATES) 145 (4): 851–63. doi:10.1083/jcb.145.4.851. ISSN 0021-9525. PMC 2133183. PMID 10330411. 
  16. ^ Mazaki, Y; Hashimoto S; Sabe H (March 1997). "Monocyte cells and cancer cells express novel paxillin isoforms with different binding properties to focal adhesion proteins". J. Biol. Chem. (UNITED STATES) 272 (11): 7437–44. doi:10.1074/jbc.272.11.7437. ISSN 0021-9258. PMID 9054445. 
  17. ^ Brown, M C; Perrotta J A; Turner C E (November 1996). "Identification of LIM3 as the principal determinant of paxillin focal adhesion localization and characterization of a novel motif on paxillin directing vinculin and focal adhesion kinase binding". J. Cell Biol. (UNITED STATES) 135 (4): 1109–23. doi:10.1083/jcb.135.4.1109. ISSN 0021-9525. PMC 2133378. PMID 8922390. 

Further reading[edit]

External links[edit]